GNU bug report logs - #48811
R 4.1.0 does not build

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: zimoun <zimon.toutoune <at> gmail.com>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#48811: closed (R 4.1.0 does not build)
Date: Mon, 14 Jun 2021 06:42:01 +0000

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Your message dated Mon, 14 Jun 2021 08:38:41 +0200
with message-id <86bl890x3i.fsf <at> gmail.com>
and subject line Re: bug#48811: R 4.1.0 does not build
has caused the debbugs.gnu.org bug report #48811,
regarding R 4.1.0 does not build
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs <at> gnu.org.)


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48811: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=48811
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From: meedstrom <at> teknik.io
To: bug-guix <at> gnu.org
Subject: R 4.1.0 does not build
Date: Thu, 03 Jun 2021 09:58:46 +0000

Running ~guix build r-minimal~ fails with the following messages. Sounds like it cannot find the
style file plain.bst and some math fonts; maybe upstream changed the dependencies. Or I read it
wrong and it's some other error from the make target "vignettes-no-lattice".

Let me know if it works for you and the issue's on my end.

#+begin_example
building/updating vignettes for package 'grid' ...
processing 'grid.Rnw'
Error: compiling TeX file 'grid.tex' failed with message:
Running 'texi2dvi' on 'grid.tex' failed.
BibTeX errors:
The top-level auxiliary file: grid.aux
I couldn't open style file plain.bst
---line 33 of file grid.aux
: \bibstyle{plain
: }
I'm skipping whatever remains of this command
I found no style file---while reading file grid.aux
Execution halted
building/updating vignettes for package 'parallel' ...
building/updating vignettes for package 'utils' ...
building/updating vignettes for package 'stats' ...
processing 'reshape.Rnw'
Error: compiling TeX file 'reshape.tex' failed with message:
Running 'texi2dvi' on 'reshape.tex' failed.
LaTeX errors:
! Math formula deleted: Insufficient symbol fonts.
\endtabular ->\crcr \egroup \egroup $
\egroup
l.22 \maketitle

Execution halted
make[1]: *** [Makefile:120: vignettes-no-lattice] Error 1
make[1]: Leaving directory '/tmp/guix-build-r-minimal-4.1.0.drv-0/R-4.1.0/src/library'
make: *** [Makefile:81: vignettes] Error 2
command "make" "-j" "4"
"LDFLAGS=-Wl,-rpath=/gnu/store/qsqgl8d8cn9v55z085jlpxarbf1zss8i-r-minimal-4.1.0/lib/R/lib"
"PKG_BUILT_STAMP=1970-01-01" failed with status 2
#+end_example

--
Martin Edström

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From: zimoun <zimon.toutoune <at> gmail.com>
To: meedstrom <at> teknik.io
Cc: 48811-done <at> debbugs.gnu.org
Subject: Re: bug#48811: R 4.1.0 does not build
Date: Mon, 14 Jun 2021 08:38:41 +0200

Hi,


On Sun, 13 Jun 2021 at 09:26, meedstrom <at> teknik.io wrote:
> It builds fine now, so this fluke will remain a mystery. I don't know
> the way to check what revision of Guix I was on at the time. All the
> best! 

The command “guix pull --list-generations” gives all the versions you
used.  Except if you explicitly removed some.

Thanks, so closing.

All the best,
simon

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