GNU bug report logs - #39904
Update of python-anndata

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Roel Janssen <roel <at> roelserve.com>
Subject: bug#39904: closed (Re: bug#39904: Acknowledgement (Update of
 python-anndata))
Date: Fri, 06 Mar 2020 09:45:02 +0000

[Message part 1 (text/plain, inline)]

Your bug report

#39904: Update of python-anndata

which was filed against the guix-patches package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to 39904 <at> debbugs.gnu.org.

-- 
39904: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=39904
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

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From: Roel Janssen <roel <at> roelserve.com>
To: 39904-close <at> debbugs.gnu.org
Subject: Re: bug#39904: Acknowledgement (Update of python-anndata)
Date: Fri, 06 Mar 2020 10:44:05 +0100

On Wed, 2020-03-04 at 15:01 +0000, GNU bug Tracking System wrote:
> Thank you for filing a new bug report with debbugs.gnu.org.
> 
> This is an automatically generated reply to let you know your message
> has been received.
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> Your message is being forwarded to the package maintainers and other
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> Your message has been sent to the package maintainer(s):
>  guix-patches <at> gnu.org
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> If you wish to submit further information on this problem, please
> send it to 39904 <at> debbugs.gnu.org.
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So, Ricardo has pushed similar patches in the meantime. Closing this
one.

Kind regards,
Roel Janssen

[Message part 3 (message/rfc822, inline)]

From: Roel Janssen <roel <at> roelserve.com>
To: guix-patches <at> gnu.org
Subject: Update of python-anndata
Date: Wed, 04 Mar 2020 11:25:33 +0100

[Message part 4 (text/plain, inline)]

Dear Guix,

I'd like to update our package for python-anndata.  For this I needed to add a
few more packages that are used in the test suite of python-anndata.

I attached the patches.  Note that for python-zarr I disabled the tests because
the majority of the tests need external packages.  We could add all dependencies
to make the test suite work, but that requires a significant amount of work (for
example, the Azure SDK for Python is one of the external dependencies).

Is it OK to move forward with the disabled test suite for python-zarr?

Thanks!

Kind regards,
Roel Janssen

[0004-gnu-Update-python-anndata-to-0.7.1.patch (text/x-patch, attachment)]

[0003-gnu-Add-python-zarr.patch (text/x-patch, attachment)]

[0002-gnu-Add-python-asciitree.patch (text/x-patch, attachment)]

[0001-gnu-Add-python-numcodecs.patch (text/x-patch, attachment)]

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