GNU bug report logs - #38676
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Package: guix-patches;

Reported by: mpatras <madalinionel.patrascu <at> mdc-berlin.de>

Date: Thu, 19 Dec 2019 19:21:02 UTC

Severity: normal

Done: Ludovic Courtès <ludo <at> gnu.org>

Bug is archived. No further changes may be made.

Full log

Message #11 received at 38676 <at> debbugs.gnu.org (full text, mbox):

From: Mădălin Ionel Patrașcu
 <madalinionel.patrascu <at> mdc-berlin.de>
To: <38676 <at> debbugs.gnu.org>
Cc: Mădălin Ionel Patrașcu
 <madalinionel.patrascu <at> mdc-berlin.de>
Subject: [PATCH 2/2] gnu: fastx-toolkit: Build with GCC 6
Date: Thu, 19 Dec 2019 20:24:09 +0100

* gnu/packages/bioinformatics.scm (fastx-toolkit)[native-inputs]: Add gcc-6.
---
 gnu/packages/bioinformatics.scm | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 528b603476..27ff70b1fb 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2995,7 +2995,8 @@ reasonable amount of time and memory.  For large alignments, FastTree is
     (inputs
      `(("libgtextutils" ,libgtextutils)))
     (native-inputs
-     `(("pkg-config" ,pkg-config)))
+     `(("gcc" ,gcc-6) ;; doesn't build with later versions
+       ("pkg-config" ,pkg-config)))
     (home-page "http://hannonlab.cshl.edu/fastx_toolkit/")
     (synopsis "Tools for FASTA/FASTQ file preprocessing")
     (description
-- 
2.24.1
This bug report was last modified 5 years and 209 days ago.

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