GNU bug report logs - #37988
[PATCH 0/6] Add flowWorkspace from BioConductor

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Message #11 received at 37988 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: 37988 <at> debbugs.gnu.org
Cc: zimoun <zimon.toutoune <at> gmail.com>
Subject: [PATCH 2/6] gnu: Add r-flowviz.
Date: Wed, 30 Oct 2019 11:25:27 +0100

* gnu/packages/bioconductor.scm (r-flowviz): New variable.
---
 gnu/packages/bioconductor.scm | 29 +++++++++++++++++++++++++++++
 1 file changed, 29 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 6467fecb8c..92e5d3ec0b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6137,3 +6137,32 @@ features (e.g.  genes, microRNAs).")
 data.  This modified test allows for testing differential expression in qPCR
 data.")
     (license license:gpl2+)))
+
+(define-public r-flowviz
+  (package
+    (name "r-flowviz")
+    (version "1.48.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "flowViz" version))
+       (sha256
+        (base32
+         "00zwfzpdln62160h1ahcki5b96y06a1na7xjqs63b7571318xj20"))))
+    (properties
+     `((upstream-name . "flowViz")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biobase" ,r-biobase)
+       ("r-flowcore" ,r-flowcore)
+       ("r-hexbin" ,r-hexbin)
+       ("r-idpmisc" ,r-idpmisc)
+       ("r-kernsmooth" ,r-kernsmooth)
+       ("r-lattice" ,r-lattice)
+       ("r-latticeextra" ,r-latticeextra)
+       ("r-mass" ,r-mass)
+       ("r-rcolorbrewer" ,r-rcolorbrewer)))
+    (home-page "https://bioconductor.org/packages/flowViz")
+    (synopsis "Visualization for flow cytometry data")
+    (description "This package provides visualization tools for flow cytometry data.")
+    (license license:artistic2.0)))
-- 
2.23.0

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