GNU bug report logs - #27181
[PATCH] gnu: Add kaiju.

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Roel Janssen <roel <at> gnu.org>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#27181: closed ([PATCH] gnu: Add kaiju.)
Date: Fri, 02 Jun 2017 11:43:01 +0000

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Your message dated Fri, 02 Jun 2017 13:42:22 +0200
with message-id <rbuzidqd3af.fsf <at> gnu.org>
and subject line Re: bug#27181: [PATCH] gnu: Add kaiju.
has caused the debbugs.gnu.org bug report #27181,
regarding [PATCH] gnu: Add kaiju.
to be marked as done.

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From: Roel Janssen <roel <at> gnu.org>
To: guix-devel <guix-patches <at> gnu.org>
Subject: [PATCH] gnu: Add kaiju.
Date: Thu, 01 Jun 2017 15:19:41 +0200

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Dear Guix,

Here's a patch for kaiju.  A C++ program without any dependencies, plus
some additional scripts that need perl.

Kind regards,
Roel Janssen

[0001-gnu-Add-kaiju.patch (text/x-diff, attachment)]

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From: Roel Janssen <roel <at> gnu.org>
To: Ludovic Courtès <ludo <at> gnu.org>
Cc: 27181-done <at> debbugs.gnu.org
Subject: Re: bug#27181: [PATCH] gnu: Add kaiju.
Date: Fri, 02 Jun 2017 13:42:22 +0200

Ludovic Courtès writes:

> Hi Roel!
>
> Roel Janssen <roel <at> gnu.org> skribis:
>
>> From ed45f47f7514faf10710b41a7d5e9cdaa8217c70 Mon Sep 17 00:00:00 2001
>> From: Roel Janssen <roel <at> gnu.org>
>> Date: Thu, 1 Jun 2017 15:01:51 +0200
>> Subject: [PATCH] gnu: Add kaiju.
>>
>> * gnu/packages/bioinformatics (kaiju): New variable.
>
> [...]
>
>> +       (modify-phases %standard-phases
>> +         (delete 'configure)
>> +         (add-before 'build 'move-to-src-dir
>> +           (lambda _ (chdir "src") #t))
>> +         (replace 'install
>> +           (lambda* (#:key inputs outputs #:allow-other-keys)
>> +             (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
>> +               (mkdir-p bin)
>> +               (chdir "..")
>> +               (copy-recursively "bin" bin)
>> +               (copy-recursively "util" bin)))))))
>
> Make sure to return #t at the end of the phase.  Otherwise LGTM!

I added the #t to the end of the phase.

Thanks Ludo’! Pushed in b9a601d9db3aa1bdb877c0ac5e7f53077ee56185.

Kind regards,
Roel Janssen

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