Subject: Re: [bug#78169] [PATCH] gnu: Rname bioinformatics clipper to bioinformatics clipper=peak to avoid naming conflict with cpp clipper.

From: Nicolas Graves <[email-masked]>
Date: Sat, 24 May 2025 16:03:06 +0200

Hi nomike,

The commit looks fine, but the commit message is too long.  You can
resubmit a patch with the following commit message :

"""
gnu: Rename clipper to clipper-peak.

There's a naming conflict with cpp/bioinformatics clipper.

* gnu/packages/bioinformatics.scm
  (clipper): Delete variable, renamed to clipper-peak.
  (clipper-peak): New variable, renamed from clipper.
  
"""

Or something similar ;)

Cheers !

Nicolas

gnu: Rname bioinformatics clipper to bioinformatics clipper=peak to avoid naming conflict with cpp clipper.

On 2025-05-01 03:22, [email-masked] wrote:

> Change-Id: I31bf7578158712cc042dbbb7a6cfb1187c2329be
> ---
>  gnu/packages/bioinformatics.scm | 5 +++--
>  1 file changed, 3 insertions(+), 2 deletions(-)
>
> diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
> index 0d27d1e232..715be69206 100644
> --- a/gnu/packages/bioinformatics.scm
> +++ b/gnu/packages/bioinformatics.scm
> @@ -27,6 +27,7 @@
>  ;;; Copyright © 2022 Antero Mejr <[email-masked]>
>  ;;; Copyright © 2024 Alexis Simon <[email-masked]>
>  ;;; Copyright © 2024 Spencer King <[email-masked]>
> +;;; Copyright © 2025 nomike Postmann <[email-masked]>
>  ;;;
>  ;;; This file is part of GNU Guix.
>  ;;;
> @@ -6023,9 +6024,9 @@ (define-public cd-hit-auxtools
>                          '("cd-hit-dup" "cd-hit-lap" "read-linker")))))))
>      (inputs '())))
>  
> -(define-public clipper
> +(define-public clipper-peak
>    (package
> -    (name "clipper")
> +    (name "clipper-peak")
>      (version "2.0.1")
>      (source (origin
>                (method git-fetch)

-- 
Best regards,
Nicolas Graves