GNU bug report logs - #77590
[PATCH 0/3] Update hdf5 to 1.14.6, fix wrappers and remove generated source files.

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Andreas Enge <andreas <at> enge.fr>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#77590: closed ([PATCH 0/3] Update hdf5 to 1.14.6, fix
 wrappers and remove generated source files.)
Date: Wed, 30 Apr 2025 18:00:02 +0000

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Your message dated Wed, 30 Apr 2025 19:51:21 +0200
with message-id <aBJjGUabcWazOaHa <at> jurong>
and subject line Re: [PATCH v6 0/7] Update hdf5 to 1.14.6, fix wrappers and remove generated source files.
has caused the debbugs.gnu.org bug report #77590,
regarding [PATCH 0/3] Update hdf5 to 1.14.6, fix wrappers and remove generated source files.
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs <at> gnu.org.)


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From: David Elsing <david.elsing <at> posteo.net>
To: guix-patches <at> gnu.org
Cc: David Elsing <david.elsing <at> posteo.net>
Subject: [PATCH 0/3] Update hdf5 to 1.14.6,
 fix wrappers and remove generated source files.
Date: Sun,  6 Apr 2025 23:23:10 +0000

This patch series updates hdf5 to 1.14.6 and applies the improvements
from https://issues.guix.gnu.org/64448 only on the hdf5 package, which
now does not inherit from hdf5-1.8 anymore. I also changed the package
to the Git source, which was already used for hdf-java. Is the commit
message fine like this? I mentioned the changes from before, where most
things were inherited from hdf5-1.8.

The Fortran output is currently only 2.8 MB (compared to 23 MB for the
main output), so I removed the additional output, as it was causing
problems with linking and the h5fc wrapper.

The installation of the examples has been disabled by default upstream
(not sure whether intentionally), so instead I made a separate package
which builds and checks the examples, but produces no output.

For hdf-java, I noticed that the used version does not have support for
HDF4 and already uses the Git source of hdf5, so I adjusted the package
accordingly and renamed it to hdf5-java.

David Elsing (3):
  gnu: hdf5: Update to 1.14.6.
  gnu: Add hdf5-examples.
  gnu: hdf-java: Update to 1.14.6 and rename to hdf5-java.

 gnu/packages/maths.scm | 293 ++++++++++++++++++++++++++++++-----------
 1 file changed, 218 insertions(+), 75 deletions(-)

-- 
2.48.1

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From: Andreas Enge <andreas <at> enge.fr>
To: David Elsing <david.elsing <at> posteo.net>
Cc: 77590-done <at> debbugs.gnu.org
Subject: Re: [PATCH v6 0/7] Update hdf5 to 1.14.6, fix wrappers and remove
 generated source files.
Date: Wed, 30 Apr 2025 19:51:21 +0200

Thanks, David, for your patience in repairing the hdf5 dependencies!
I trust the previous QA run, have verified that gnudatalanguage and cdo
compile now, and pushed your patches.

Andreas

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