GNU bug report logs - #77357
[PATCH 0/1] Remove freebayes

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Arun Isaac <arunisaac <at> systemreboot.net>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#77357: closed ([PATCH 0/1] Remove freebayes)
Date: Fri, 04 Apr 2025 00:43:02 +0000

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Your message dated Fri, 04 Apr 2025 01:41:34 +0100
with message-id <87y0wgkbb5.fsf <at> systemreboot.net>
and subject line Re: [PATCH 0/1] Remove freebayes
has caused the debbugs.gnu.org bug report #77357,
regarding [PATCH 0/1] Remove freebayes
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs <at> gnu.org.)


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77357: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=77357
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From: Andreas Enge <andreas <at> enge.fr>
To: guix-patches <at> gnu.org
Cc: rekado <at> elephly.net, Andreas Enge <andreas <at> enge.fr>
Subject: [PATCH 0/1] Remove freebayes
Date: Sat, 29 Mar 2025 10:52:45 +0100

I noticed that the package does not build when updating parallel.
It should be possible to somehow repair it, but apparently nobody has
noticed that the package does not build any more for almost two years:
   https://ci.guix.gnu.org/build/9529724/details
   first failure:
   https://ci.guix.gnu.org/build/1171985/details
So if there is no interest in it, there is maybe no point in spending
time on it.

I would suggest to remove it on or after April 29.

Andreas Enge (1):
  gnu: Remove freebayes.

 gnu/packages/bioinformatics.scm | 82 ---------------------------------
 1 file changed, 82 deletions(-)


base-commit: 67f4a2feadbb6cc04a61b5a3bc7b8f4bace2a0bb
-- 
2.49.0

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From: Arun Isaac <arunisaac <at> systemreboot.net>
To: 77357-done <at> debbugs.gnu.org
Cc: Ricardo Wurmus <rekado <at> elephly.net>, Andreas Enge <andreas <at> enge.fr>,
 Sebastian Dümcke <code <at> sam-d.com>
Subject: Re: [PATCH 0/1] Remove freebayes
Date: Fri, 04 Apr 2025 01:41:34 +0100

Hi all,

Thank you all for your hard work. I use freebayes in my research, and I
can confirm that it actually works and produces scientifically
meaningful results.

Regards,
Arun

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