GNU bug report logs - #77357
[PATCH 0/1] Remove freebayes

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Package: guix-patches;

Reported by: Andreas Enge <andreas <at> enge.fr>

Date: Sat, 29 Mar 2025 09:58:02 UTC

Severity: normal

Tags: patch

Done: Arun Isaac <arunisaac <at> systemreboot.net>

Bug is archived. No further changes may be made.

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From: Ricardo Wurmus <rekado <at> elephly.net>
To: Andreas Enge <andreas <at> enge.fr>
Cc: Sebastian Dümcke <code <at> sam-d.com>, 77357 <at> debbugs.gnu.org
Subject: [bug#77357] [PATCH 0/1] Remove freebayes
Date: Thu, 03 Apr 2025 17:09:13 +0200
Andreas Enge <andreas <at> enge.fr> writes:

> Ricardo sent a bug upstream about a year ago:
>    https://github.com/freebayes/freebayes/issues/825
>
> Pjotrp mentions vcflib, which is a package with only freebayes 
> as
> dependency in Guix. We are at version 1.0.9 of February 2023, 
> and there
> is a 1.0.12 from November 2024. But the package recipe is quite 
> the
> nightmare...

I have locally updated vcflib to 1.0.12 and managed to build the 
latest version of freebayes.
It was not fun.

I'll push this once I've cleaned up my unrelated WIP for ITK.

-- 
Ricardo




This bug report was last modified 109 days ago.

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