From debbugs-submit-bounces@debbugs.gnu.org Wed Feb 26 04:41:43 2025 Received: (at submit) by debbugs.gnu.org; 26 Feb 2025 09:41:43 +0000 Received: from localhost ([127.0.0.1]:51012 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tnDvC-0001Df-7W for submit@debbugs.gnu.org; Wed, 26 Feb 2025 04:41:43 -0500 Received: from lists.gnu.org ([2001:470:142::17]:43358) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tnCMU-00050a-U5 for submit@debbugs.gnu.org; Wed, 26 Feb 2025 03:01:48 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tnCM6-000268-Eb for guix-patches@gnu.org; Wed, 26 Feb 2025 03:01:23 -0500 Received: from sainfoin-smtp-out.extra.cea.fr ([132.167.192.228]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tnCM1-000835-NT for guix-patches@gnu.org; Wed, 26 Feb 2025 03:01:22 -0500 Received: from e-emp-b0.extra.cea.fr (e-emp-b0.extra.cea.fr [132.167.198.36]) by sainfoin-sys.extra.cea.fr (8.14.7/8.14.7/CEAnet-Internet-out-4.0) with ESMTP id 51Q816FA061480 for ; Wed, 26 Feb 2025 09:01:06 +0100 Received: from pps.filterd (e-emp-b0.extra.cea.fr [127.0.0.1]) by e-emp-b0.extra.cea.fr (8.18.1.2/8.18.1.2) with ESMTP id 51Q2v1I1012572 for ; Wed, 26 Feb 2025 09:01:06 +0100 Received: from pps.reinject (localhost [127.0.0.1]) by e-emp-b0.extra.cea.fr (PPS) with ESMTP id 451nt4h3y2-1 for ; Wed, 26 Feb 2025 09:01:06 +0100 (CET) Received: from e-emp-b0.extra.cea.fr (e-emp-b0.extra.cea.fr [127.0.0.1]) by pps.reinject (8.18.0.8/8.18.0.8) with ESMTP id 51Q816OE009432; Wed, 26 Feb 2025 09:01:06 +0100 Received: from orpin2-smtp-out.extra.cea.fr (orpin2-smtp-out.extra.cea.fr [132.167.198.47]) by e-emp-b0.extra.cea.fr (PPS) with ESMTP id 451nt4h3y0-1; Wed, 26 Feb 2025 09:01:06 +0100 (CET) Received: from mdlspc219.extra.cea.fr (mdlspc219.extra.cea.fr [132.167.204.219]) by orpin2-sys.extra.cea.fr (8.14.7/8.14.7/CEAnet-Internet-out-4.0) with ESMTP id 51Q816oc036816; Wed, 26 Feb 2025 09:01:06 +0100 From: Benoit Martin To: guix-patches@gnu.org Subject: [PATCH 0/3] update python-dask Date: Wed, 26 Feb 2025 09:00:52 +0100 Message-Id: X-Mailer: git-send-email 2.34.1 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Proofpoint-GUID: y9ATIN014HvBvTD0gkUHWilHqbcAvDS8 X-Proofpoint-ORIG-GUID: 1Y3fFA2SPhzks5WAKaMKxRwl1ZlWpa26 Received-SPF: pass client-ip=132.167.192.228; envelope-from=bmartin@cea.fr; helo=sainfoin-smtp-out.extra.cea.fr X-Spam_score_int: -41 X-Spam_score: -4.2 X-Spam_bar: ---- X-Spam_report: (-4.2 / 5.0 requ) BAYES_00=-1.9, RCVD_IN_DNSWL_MED=-2.3, RCVD_IN_VALIDITY_CERTIFIED_BLOCKED=0.001, RCVD_IN_VALIDITY_RPBL_BLOCKED=0.001, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: submit X-Mailman-Approved-At: Wed, 26 Feb 2025 04:41:40 -0500 Cc: Benoit Martin X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) This patch series updates python-dask and related packages. Benoit Martin (3): gnu: python-dask-expr: Update to 1.1.21. gnu: python-distributed: Update to 2024.12.1. gnu: python-dask: Update to 2024.12.1. gnu/packages/python-science.scm | 14 ++++++++++---- gnu/packages/python-xyz.scm | 9 ++++++--- 2 files changed, 16 insertions(+), 7 deletions(-) base-commit: 651f8765b657e35baf85ac74a1f6b09ff71691cb -- 2.34.1 From debbugs-submit-bounces@debbugs.gnu.org Wed Feb 26 06:53:11 2025 Received: (at 76578) by debbugs.gnu.org; 26 Feb 2025 11:53:11 +0000 Received: from localhost ([127.0.0.1]:51284 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tnFyP-0001xq-Si for submit@debbugs.gnu.org; Wed, 26 Feb 2025 06:53:10 -0500 Received: from cirse-smtp-out.extra.cea.fr ([132.167.192.148]:58108) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tnEAl-0001xn-Sk for 76578@debbugs.gnu.org; Wed, 26 Feb 2025 04:57:48 -0500 Received: from e-emp-a0.extra.cea.fr (e-emp-a0.extra.cea.fr [132.167.198.35]) by cirse-sys.extra.cea.fr (8.14.7/8.14.7/CEAnet-Internet-out-4.0) with ESMTP id 51Q9vj22041542 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from pps.filterd (e-emp-a0.extra.cea.fr [127.0.0.1]) by e-emp-a0.extra.cea.fr (8.18.1.2/8.18.1.2) with ESMTP id 51Q0iixA014876 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from pps.reinject (localhost [127.0.0.1]) by e-emp-a0.extra.cea.fr (PPS) with ESMTP id 44yv4gem7s-1 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 (CET) Received: from e-emp-a0.extra.cea.fr (e-emp-a0.extra.cea.fr [127.0.0.1]) by pps.reinject (8.18.0.8/8.18.0.8) with ESMTP id 51Q9fUGg007831 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from orpin2-smtp-out.extra.cea.fr (orpin2-smtp-out.extra.cea.fr [132.167.198.47]) by e-emp-a0.extra.cea.fr (PPS) with ESMTP id 44yv4gem7q-1; Wed, 26 Feb 2025 10:57:45 +0100 (CET) Received: from mdlspc219.extra.cea.fr (mdlspc219.extra.cea.fr [132.167.204.219]) by orpin2-sys.extra.cea.fr (8.14.7/8.14.7/CEAnet-Internet-out-4.0) with ESMTP id 51Q9vj4G048144; Wed, 26 Feb 2025 10:57:45 +0100 From: Benoit Martin To: 76578@debbugs.gnu.org Subject: [PATCH 1/3] gnu: python-dask-expr: Update to 1.1.21. Date: Wed, 26 Feb 2025 10:57:34 +0100 Message-Id: X-Mailer: git-send-email 2.34.1 In-Reply-To: References: MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Proofpoint-GUID: IQQejcXMXB6LY__axYZ9xilAHjDcYgzq X-Proofpoint-ORIG-GUID: OrB75PBjYWExPhcKeg7zHZPkDIrDqCNG X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 76578 X-Mailman-Approved-At: Wed, 26 Feb 2025 06:53:08 -0500 Cc: Benoit Martin X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) * gnu/packages/python-science.scm (python-dask-expr): Update to 1.1.21. Change-Id: Iaee50368ffafc473164865249e2a51732b1ea54f --- gnu/packages/python-science.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 127e9e378a..9357d5ed10 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -2709,7 +2709,7 @@ (define-public python-pyglm (define-public python-dask-expr (package (name "python-dask-expr") - (version "1.0.14") + (version "1.1.21") (source (origin (method git-fetch) @@ -2718,7 +2718,7 @@ (define-public python-dask-expr (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0c2q8w8wl5d2hycbjp9vavkl5f36kaz390wxlis2d8d43jnqhf0d")))) + (base32 "0m920db2asmqf4w2dncpnkccdhx4c9sfcsd96bh1jfdh8sw2wf6z")))) (build-system pyproject-build-system) (arguments (list -- 2.34.1 From debbugs-submit-bounces@debbugs.gnu.org Wed Feb 26 06:53:17 2025 Received: (at 76578) by debbugs.gnu.org; 26 Feb 2025 11:53:18 +0000 Received: from localhost ([127.0.0.1]:51286 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tnFyX-0001y9-73 for submit@debbugs.gnu.org; Wed, 26 Feb 2025 06:53:17 -0500 Received: from sainfoin-smtp-out.extra.cea.fr ([132.167.192.228]:53549) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tnEAl-0001xo-PJ for 76578@debbugs.gnu.org; Wed, 26 Feb 2025 04:57:48 -0500 Received: from e-emp-a0.extra.cea.fr (e-emp-a0.extra.cea.fr [132.167.198.35]) by sainfoin-sys.extra.cea.fr (8.14.7/8.14.7/CEAnet-Internet-out-4.0) with ESMTP id 51Q9vj0k035614 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from pps.filterd (e-emp-a0.extra.cea.fr [127.0.0.1]) by e-emp-a0.extra.cea.fr (8.18.1.2/8.18.1.2) with ESMTP id 51Q1iZ6m003794 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from pps.reinject (localhost [127.0.0.1]) by e-emp-a0.extra.cea.fr (PPS) with ESMTP id 44yv4gem7v-1 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 (CET) Received: from e-emp-a0.extra.cea.fr (e-emp-a0.extra.cea.fr [127.0.0.1]) by pps.reinject (8.18.0.8/8.18.0.8) with ESMTP id 51Q9vLql031555 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from orpin2-smtp-out.extra.cea.fr (orpin2-smtp-out.extra.cea.fr [132.167.198.47]) by e-emp-a0.extra.cea.fr (PPS) with ESMTP id 44yv4gem7r-1; Wed, 26 Feb 2025 10:57:45 +0100 (CET) Received: from mdlspc219.extra.cea.fr (mdlspc219.extra.cea.fr [132.167.204.219]) by orpin2-sys.extra.cea.fr (8.14.7/8.14.7/CEAnet-Internet-out-4.0) with ESMTP id 51Q9vj4H048144; Wed, 26 Feb 2025 10:57:45 +0100 From: Benoit Martin To: 76578@debbugs.gnu.org Subject: [PATCH 2/3] gnu: python-distributed: Update to 2024.12.1. Date: Wed, 26 Feb 2025 10:57:35 +0100 Message-Id: <44468035f75a306f3d3e476da8ac6f6eb0bbacc5.1740557011.git.bmartin@cea.fr> X-Mailer: git-send-email 2.34.1 In-Reply-To: References: MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Proofpoint-GUID: wkN6qQnOj1AF-kg5t4JclWKUD9M2wUnM X-Proofpoint-ORIG-GUID: disH84GbMrlnyEn0Gc_uWFM3jzP_LfcY X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 76578 X-Mailman-Approved-At: Wed, 26 Feb 2025 06:53:08 -0500 Cc: Benoit Martin X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) * gnu/packages/python-science.scm (python-distributed): Update to 2024.12.1. Change-Id: Ia557e7d87e48a709298bf7024ee01b08098f5842 --- gnu/packages/python-science.scm | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 9357d5ed10..b6aa495941 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -2762,7 +2762,7 @@ (define-public python-dask-expr (define-public python-distributed (package (name "python-distributed") - (version "2024.4.2") + (version "2024.12.1") (source (origin ;; The test files are not included in the archive on pypi @@ -2773,7 +2773,7 @@ (define-public python-distributed (file-name (git-file-name name version)) (sha256 (base32 - "0sy9mqa8qlxsagbz8xn304csrlxhxj4b6k84yrjxdcmkp9pkx166")))) + "1k0kmzd48mvaaizbf3b6lk84s0fw88x9v7hfgiddyyv6mf4x7h27")))) (build-system pyproject-build-system) (arguments (list @@ -2784,6 +2784,10 @@ (define-public python-distributed " and not gpu" " and not ipython" " and not avoid_ci") + ;; This disables FutureWarning that are caught as error, + ;; related to the merge of python-dask-expr in python-dask. + "-W" + (string-append "ignore::FutureWarning") "-k" (string-append ;; These fail because they require network access, @@ -2849,6 +2853,7 @@ (define-public python-distributed "test_rebalance_sync" "test_repr_localcluster" "test_require_encryption" + "test_rpc_closed_exception" "test_rpc_default" "test_rpc_inproc" "test_rpc_message_lifetime_default" @@ -2880,6 +2885,7 @@ (define-public python-distributed "test_threadpoolworkers_pick_correct_ioloop" "test_tls_listen_connect" "test_tls_temporary_credentials_functional" + "test_transition_failure_triggers_log_event" "test_variable_in_task" "test_worker_preload_text" "test_worker_uses_same_host_as_nanny" -- 2.34.1 From debbugs-submit-bounces@debbugs.gnu.org Wed Feb 26 06:53:18 2025 Received: (at 76578) by debbugs.gnu.org; 26 Feb 2025 11:53:19 +0000 Received: from localhost ([127.0.0.1]:51288 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tnFyY-0001yG-1B for submit@debbugs.gnu.org; Wed, 26 Feb 2025 06:53:18 -0500 Received: from oxalide-smtp-out.extra.cea.fr ([132.168.224.13]:52025) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tnEAl-0001xq-Pe for 76578@debbugs.gnu.org; Wed, 26 Feb 2025 04:57:54 -0500 Received: from e-emp-a0.extra.cea.fr (e-emp-a0.extra.cea.fr [132.167.198.35]) by oxalide-sys.extra.cea.fr (8.14.7/8.14.7/CEAnet-Internet-out-4.0) with ESMTP id 51Q9vjI7035677 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from pps.filterd (e-emp-a0.extra.cea.fr [127.0.0.1]) by e-emp-a0.extra.cea.fr (8.18.1.2/8.18.1.2) with ESMTP id 51Q16dKc003595 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from pps.reinject (localhost [127.0.0.1]) by e-emp-a0.extra.cea.fr (PPS) with ESMTP id 44yv4gem7w-1 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 (CET) Received: from e-emp-a0.extra.cea.fr (e-emp-a0.extra.cea.fr [127.0.0.1]) by pps.reinject (8.18.0.8/8.18.0.8) with ESMTP id 51Q9veMc031862 for <76578@debbugs.gnu.org>; Wed, 26 Feb 2025 10:57:45 +0100 Received: from orpin2-smtp-out.extra.cea.fr (orpin2-smtp-out.extra.cea.fr [132.167.198.47]) by e-emp-a0.extra.cea.fr (PPS) with ESMTP id 44yv4gem7t-1; Wed, 26 Feb 2025 10:57:45 +0100 (CET) Received: from mdlspc219.extra.cea.fr (mdlspc219.extra.cea.fr [132.167.204.219]) by orpin2-sys.extra.cea.fr (8.14.7/8.14.7/CEAnet-Internet-out-4.0) with ESMTP id 51Q9vj4I048144; Wed, 26 Feb 2025 10:57:45 +0100 From: Benoit Martin To: 76578@debbugs.gnu.org Subject: [PATCH 3/3] gnu: python-dask: Update to 2024.12.1. Date: Wed, 26 Feb 2025 10:57:36 +0100 Message-Id: <998c2f28598d35297a5db4cf1409b14abf5ccad4.1740557011.git.bmartin@cea.fr> X-Mailer: git-send-email 2.34.1 In-Reply-To: References: MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Proofpoint-GUID: FATFGC9keiOXy4BmkZypmWNgSlfd6u6R X-Proofpoint-ORIG-GUID: y7ojQl8A1JTYEhpGUMOoScRXDQKCUnVM X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 76578 X-Mailman-Approved-At: Wed, 26 Feb 2025 06:53:08 -0500 Cc: Benoit Martin X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) * gnu/packages/python-xyz.scm (python-dask): Update to 2024.12.1. Change-Id: I776e9dd3d4a12d33e89e4d48a5e637cb9d6f465e --- gnu/packages/python-xyz.scm | 9 ++++++--- 1 file changed, 6 insertions(+), 3 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index bb0ab777d5..5ac44db4b8 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -30507,7 +30507,7 @@ (define-public python-fsspec (define-public python-dask (package (name "python-dask") - (version "2024.4.2") + (version "2024.12.1") (source (origin (method git-fetch) @@ -30516,7 +30516,7 @@ (define-public python-dask (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "1kaxlvqd5hknlb0awck5vcw9b18nl8rpxx4j78js8p9d0y5rsgw8")))) + (base32 "17iqfyjphyn72xdr8fmynzvixskbq16pwmsknwc6anq7s2axvas2")))) (build-system pyproject-build-system) (arguments (list @@ -30544,7 +30544,10 @@ (define-public python-dask " and not test_to_delayed_optimize_graph" ;; This one expects a deprecation warning that never ;; comes. - " and not test_RandomState_only_funcs") + " and not test_RandomState_only_funcs" + ;; This test expects a RuntimeWarning that is never + ;; raised. + " and not test_nanquantile_all_nan") ;; Tests must run from the output directory, because otherwise ;; it complains about the difference between the target ;; directory embedded in the pyc files and the source directory -- 2.34.1 From debbugs-submit-bounces@debbugs.gnu.org Mon Mar 10 08:55:50 2025 Received: (at 76578) by debbugs.gnu.org; 10 Mar 2025 12:55:50 +0000 Received: from localhost ([127.0.0.1]:36655 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1trcfe-0003bv-3o for submit@debbugs.gnu.org; Mon, 10 Mar 2025 08:55:50 -0400 Received: from mail3-relais-sop.national.inria.fr ([192.134.164.104]:29164) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1trcfX-0003bZ-0k for 76578@debbugs.gnu.org; Mon, 10 Mar 2025 08:55:44 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=inria.fr; s=dc; h=from:to:cc:subject:in-reply-to:references:date: message-id:mime-version:content-transfer-encoding; bh=ccjT0vxTrcUjo1tf3vKgrRwsJvYSjjvf00FJ1/h6WJE=; b=T6hfZ9CnAu/SxEaP0YdtzwboVgbCqCvZlGpCYGzZea9rEJCWneNcL9Ax hutTJ8bxj5/+44dZ/s5H8CLsnvGl8rXQDtC8ejltrAsGRl5o6D9B4bffE l5sWTOx1Yfi+LkkR8ijSMGFip6T7rFOpbi9P3Tb9RqC7G/z1c50VTgrTG Q=; Authentication-Results: mail3-relais-sop.national.inria.fr; dkim=none (message not signed) header.i=none; spf=SoftFail smtp.mailfrom=ludovic.courtes@inria.fr; dmarc=fail (p=none dis=none) d=inria.fr X-IronPort-AV: E=Sophos;i="6.14,236,1736809200"; d="scan'208";a="111140687" Received: from unknown (HELO ribbon) ([193.50.110.159]) by mail3-relais-sop.national.inria.fr with ESMTP/TLS/ECDHE-RSA-AES256-GCM-SHA384; 10 Mar 2025 13:55:35 +0100 From: =?utf-8?Q?Ludovic_Court=C3=A8s?= To: Benoit Martin Subject: Re: [bug#76578] [PATCH 0/3] update python-dask In-Reply-To: (Benoit Martin's message of "Wed, 26 Feb 2025 09:00:52 +0100") References: Date: Mon, 10 Mar 2025 13:55:34 +0100 Message-ID: <87plipt589.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 76578 Cc: 76578@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Hi Benoit, Benoit Martin skribis: > This patch series updates python-dask and related packages. > > Benoit Martin (3): > gnu: python-dask-expr: Update to 1.1.21. > gnu: python-distributed: Update to 2024.12.1. > gnu: python-dask: Update to 2024.12.1. This patch series breaks python-arboreto: --8<---------------cut here---------------start------------->8--- starting phase `sanity-check' validating 'arboreto' /gnu/store/k1rsw0q58s6d82bz7swp9qn5aba0j03n-python-ar= boreto-0.1.6/lib/python3.10/site-packages ...checking requirements: ERROR: arboreto=3D=3D0.1.6 ContextualVersionConfl= ict(bokeh 2.4.3 (/gnu/store/hm1anf9fnl635p07rgjr7vj0qg18cr06-python-bokeh-2= .4.3/lib/python3.10/site-packages), Requirement.parse('bokeh>=3D3.1.0; extr= a =3D=3D "diagnostics"'), {'dask'}) error: in phase 'sanity-check': uncaught exception: %exception #<&invoke-error program: "python" arguments: ("/gnu/store/iqsjkp= 55pcx5bfcp2jm9yj5rlx9a0whd-sanity-check.py" "/gnu/store/k1rsw0q58s6d82bz7sw= p9qn5aba0j03n-python-arboreto-0.1.6/lib/python3.10/site-packages") exit-sta= tus: 1 term-signal: #f stop-signal: #f>=20 phase `sanity-check' failed after 0.7 seconds command "python" "/gnu/store/iqsjkp55pcx5bfcp2jm9yj5rlx9a0whd-sanity-check.= py" "/gnu/store/k1rsw0q58s6d82bz7swp9qn5aba0j03n-python-arboreto-0.1 --8<---------------cut here---------------end--------------->8--- =E2=80=A6 and triggers one test failure in python-scitools-iris: --8<---------------cut here---------------start------------->8--- SKIPPED [1] ../../../gnu/store/v685kxa0pv5xzss1sjina70vpkk418ad-python-scit= ools-iris-3.11.1/lib/python3.10/site-packages/iris/tests/test_abf.py:33: Te= st(s) require external data. SKIPPED [1] ../../../gnu/store/v685kxa0pv5xzss1sjina70vpkk418ad-python-scit= ools-iris-3.11.1/lib/python3.10/site-packages/iris/tests/test_abf.py:21: Te= st(s) require external data. FAILED tests/test_pickling.py::TestPickle::test_cube_with_deferred_unit_con= version - TypeError: cannot pickle 'Task' object: a class that defines __sl= ots__ without defining __getstate__ cannot be pickled with protocol 0 =3D=3D=3D=3D=3D=3D=3D=3D=3D 1 failed, 8680 passed, 966 skipped, 1101 warnin= gs in 39.78s =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D error: in phase 'check': uncaught exception: %exception #<&invoke-error program: "/gnu/store/i65m7m87830mbw56p9gckfmk27v= jrs56-python-pytest-8.3.3/bin/pytest" arguments: ("-vv" "--numprocesses" "3= 4" "--pyargs" "iris" "-k" "not test_both_transposed and not test_2d_coords_= contour and not test_2d_plain_latlon and not test_2d_plain_latlon_on_polar_= map and not test_2d_rotated_latlon and not test_2d_rotated_latlon and not t= est_ancillary_variables_pass_0 and not test_auxiliary_coordinates_pass_0 an= d not test_bounds and not test_bounds_pass_0 and not test_broadcast_cubes a= nd not test_broadcast_cubes_weighted and not test_broadcast_transpose_cubes= _weighted and not test_cell_measures_pass_0 and not test_common_mask_broadc= ast and not test_common_mask_simple and not test_compatible_cubes and not t= est_compatible_cubes_weighted and not test_coord_transposed and not test_co= ordinates_pass_0 and not test_cube_transposed and not test_data_pass_0 and = not test_destructor and not test_formula_terms_pass_0 and not test_global_a= ttributes_pass_0 and not test_grid_mapping_pass_0 and not test_grouped_dim = and not test_incompatible_cubes and not test_izip_different_shaped_coords a= nd not test_izip_different_valued_coords and not test_izip_extra_coords_bot= h_slice_dims and not test_izip_extra_coords_slice_dim and not test_izip_ext= ra_coords_step_dim and not test_izip_extra_dim and not test_izip_input_coll= ections and not test_izip_missing_slice_coords and not test_izip_nd_non_ort= ho and not test_izip_nd_ortho and not test_izip_no_args and not test_izip_n= o_common_coords_on_step_dim and not test_izip_onecube_height_lat_long and n= ot test_izip_onecube_lat and not test_izip_onecube_lat_lon and not test_izi= p_onecube_no_coords and not test_izip_ordered and not test_izip_returns_ite= rable and not test_izip_same_cube_lat and not test_izip_same_cube_lat_lon a= nd not test_izip_same_cube_no_coords and not test_izip_same_dims_single_coo= rd and not test_izip_same_dims_two_coords and not test_izip_subcube_of_same= and not test_izip_unequal_slice_coords and not test_izip_use_in_analysis a= nd not test_label_dim_end and not test_label_dim_start and not test_lenient= _handling and not test_load_pp_timevarying_orography and not test_mdtol and= not test_netcdf_v3 and not test_no_delayed_writes and not test_no_transpos= e and not test_non_existent_coord and not test_perfect_corr and not test_pe= rfect_corr_all_dims and not test_python_versions and not test_realfile_load= save_equivalence and not test_realise_data and not test_realise_data_multis= ource and not test_scheduler_types and not test_single_coord and not test_s= tream and not test_stream_multisource and not test_stream_multisource__many= chunks and not test_time_of_writing and not test_ungrouped_dim and not test= _variable_attribute_touch_pass_0 and not test_variable_cf_group_pass_0 and = not test_weight_error") exit-status: 1 term-signal: #f stop-signal: #f>=20 phase `check' failed after 40.9 seconds --8<---------------cut here---------------end--------------->8--- Do you think you could take a look? For the record, I checked with: ./pre-inst-env guix build -P1 python-dask -P1 python-distributed \ -P1 python-dask-expr --no-grafts Thanks for your work! Ludo=E2=80=99. From debbugs-submit-bounces@debbugs.gnu.org Thu May 15 04:12:08 2025 Received: (at 76578) by debbugs.gnu.org; 15 May 2025 08:12:08 +0000 Received: from localhost ([127.0.0.1]:50726 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1uFThI-0004Wg-C6 for submit@debbugs.gnu.org; Thu, 15 May 2025 04:12:08 -0400 Received: from mail2-relais-roc.national.inria.fr ([192.134.164.83]:25764) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1uFThD-0004Vx-IR for 76578@debbugs.gnu.org; Thu, 15 May 2025 04:12:05 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=inria.fr; s=dc; h=from:to:cc:subject:in-reply-to:references:date: message-id:mime-version:content-transfer-encoding; bh=t3YH1n5KvQXDIuzJbzM65WUAzJEVIFLmoOQQ6xaXXCw=; b=sr5rLE0zGR1LfHeb69YOtZw46z9YRMSvhUxs+ar/sQFsNdt1TkKoAyNL w1ChjuatNKzfgf9vjeZfbb8O0IBP7h1c5X4/ZxbSDnaljnULObQzxQLLL 991Y5o+rmqtZdVor5q78M97Tml/Z6lkSkUXsIx8PT5bf3U1ajXcGOydlQ 4=; Authentication-Results: mail2-relais-roc.national.inria.fr; dkim=none (message not signed) header.i=none; spf=SoftFail smtp.mailfrom=ludovic.courtes@inria.fr; dmarc=fail (p=none dis=none) d=inria.fr X-IronPort-AV: E=Sophos;i="6.15,290,1739833200"; d="scan'208";a="222177886" Received: from 91-160-117-201.subs.proxad.net (HELO ribbon) ([91.160.117.201]) by mail2-relais-roc.national.inria.fr with ESMTP/TLS/ECDHE-RSA-AES256-GCM-SHA384; 15 May 2025 10:11:55 +0200 From: =?utf-8?Q?Ludovic_Court=C3=A8s?= To: Ludovic =?utf-8?Q?Court=C3=A8s?= Subject: Re: [bug#76578] [PATCH 0/3] update python-dask In-Reply-To: <87plipt589.fsf@gnu.org> ("Ludovic =?utf-8?Q?Court=C3=A8s=22'?= =?utf-8?Q?s?= message of "Mon, 10 Mar 2025 13:55:34 +0100") References: <87plipt589.fsf@gnu.org> Date: Thu, 15 May 2025 09:36:30 +0200 Message-ID: <87sel6xr41.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 76578 Cc: sharlatanus@gmail.com, me@bonfacemunyoki.com, Benoit Martin , lars@6xq.net, 76578@debbugs.gnu.org, tanguy@bioneland.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Hello, Ludovic Court=C3=A8s writes: > Benoit Martin skribis: > >> This patch series updates python-dask and related packages. >> >> Benoit Martin (3): >> gnu: python-dask-expr: Update to 1.1.21. >> gnu: python-distributed: Update to 2024.12.1. >> gnu: python-dask: Update to 2024.12.1. > > This patch series breaks python-arboreto: [...] > =E2=80=A6 and triggers one test failure in python-scitools-iris: Python team, how would you suggest going forward with this =E2=80=98python-= dask=E2=80=99 upgrade? https://issues.guix.gnu.org/76578 Perhaps updating =E2=80=98python-scitools-iris=E2=80=99 would help, but =E2=80=98python-arboreto=E2=80=99 is already the latest versions. Thoughts? Thanks, Ludo=E2=80=99.