Package: guix-patches;
Reported by: Sharlatan Hellseher <sharlatanus <at> gmail.com>
Date: Tue, 21 Jan 2025 23:17:02 UTC
Severity: normal
Tags: patch
Done: Sharlatan Hellseher <sharlatanus <at> gmail.com>
Bug is archived. No further changes may be made.
View this message in rfc822 format
From: Sharlatan Hellseher <sharlatanus <at> gmail.com> To: 75742 <at> debbugs.gnu.org Cc: Sharlatan Hellseher <sharlatanus <at> gmail.com>, Andreas Enge <andreas <at> enge.fr>, Eric Bavier <bavier <at> posteo.net>, Sharlatan Hellseher <sharlatanus <at> gmail.com> Subject: [bug#75742] [PATCH 00/27] Astro update 2025/01 Date: Tue, 21 Jan 2025 23:15:16 +0000
Hi Guix!
Just after python-team branch has been merged, during DDoS to GNU
infrastructure, before Guix unconference on FOSDEM 2025 and go-team branch
merge on horizon - the first astrosoft for this year (it's 2025 already!) is
ready for review.
The main highlights:
- Stellarium is upgraded to it's latest commit due to issue with INDI
(24.3->24.4-0.60b6bec)
- More lower level projects are finally packaged, some of them depend on
HEALPix: python-pixell
- Finally, packaged ducc - a numerical library with binding in C++, Rust,
Python, Julia and Fortran
The log:
- added [6/6]
- [X] python-agnpy :: Modelling Active Galactic Nuclei radiative processes
with python
- [X] python-ducc0 :: Distinctly Useful Code Collection
- [X] python-mapsims :: Map based simulations software for CMB Experiments
- [X] python-pixell :: Tectangular pixel map manipulation and harmonic
analysis
- [X] python-pysm3 :: Sky emission simulations for Cosmic Microwave
Background experiments
- [X] ska-sdp-func :: SDP Processing Function Library
- updated [20/20]
- [X] calceph :: 4.0.3->4.0.4
- [X] python-ads :: 0.12.6->0.12.77
- [X] python-asdf-compression :: 0.0.1-0.57cc7e7->0.0.1-1.7cfd07c
- [X] python-astropy-iers-data :: 0.2024.11.18.0.35.2->0.2025.1.20.0.32.27
- [X] python-astroquery :: 0.4.7->0.4.8
- [X] python-ccdproc :: 2.4.2->2.4.3
- [X] python-cdflib :: 1.3.2->1.3.3
- [X] python-crds :: 12.0.8->12.0.9
- [X] python-czml3 :: 1.0.2->2.3.0.
- [X] python-ndcube :: 2.2.4->2.3.0
- [X] python-poppy :: 1.1.1->1.1.2
- [X] python-rad :: 0.22.0->0.23.0
- [X] python-roman-datamodels :: 0.22.0->0.23.0
- [X] python-spectral-cube :: 0.6.5->0.6.6
- [X] python-statmorph :: 0.6.0->0.6.1
- [X] python-numexpr :: 2.8.4->2.9.0; starting from 2.10.0, NumPy 2+ is
required
- [X] python-sunpy-soar :: 1.10->1.11.0
- [X] python-viresclient :: 0.12.0->0.12.1
- [X] sextractor :: 2.28.0->2.28.2
- [X] stellarium :: 24.3->24.4-0.60b6bec
Hand of help is need here.
- issues [5/5][100%]
- [X] python-astropy :: would be upgraded from 6.1.7 to 7.0.0; Python3.11
is required
- [X] python-stcal :: would be upgraded from 1.10.0 to 1.11.0; failed to
build with numpy 1.24
- [X] python-jwst
- [X] python-jwst-reffiles
- [X] python-naima :: would be upgraded from 0.10.0 to 0.10.2; NumPy 2 or
later
- [X] python-photutils :: would be upgraded from 1.10.0 to 1.11.0; NumPy
1.25+
- [X] python-poliastro :: failed to build, not maintained there is an
alternative fork to wich we may migrate
<https://github.com/pleiszenburg/hapsira>
The build stats for x86_64-linux:
#+begin_src shell
> ./pre-inst-env guix build calceph python-ads python-asdf-compression
python-astropy-iers-data python-astroquery python-ccdproc python-cdflib
python-crds python-czml3 python-ducc0 python-mapsims python-ndcube
python-numexpr python-pixell python-poppy python-pysm3 python-rad
python-roman-datamodels python-so-noise-models python-spectral-cube
python-statmorph python-sunpy-soar python-viresclient sextractor ska-sdp-func
stellarium
/gnu/store/8117y20155rrlxdpdwf1fv0378jq5lf3-calceph-4.0.4
/gnu/store/vlsp69is3zl9fygf29if310hqrn9cqn7-python-ads-0.12.7
/gnu/store/7q6cy40d4n9j7qq6irhvqp50syrhw6qy-python-asdf-compression-0.0.1-1.7cfd07c
/gnu/store/3wby3h12g8rs3gp001s32g50r71ssn8i-python-astropy-iers-data-0.2025.1.20.0.32.27
/gnu/store/xisipx93la5v021sfkkp7mhjb5m6b6ay-python-astroquery-0.4.8
/gnu/store/3fm9ic2sc9y1zvm0dp57yh1k8fwkskcg-python-ccdproc-2.4.3
/gnu/store/rqzj1h5r6fj82ycw77c0576jac1c4lrs-python-cdflib-1.3.3
/gnu/store/mrabslkj2cdrwfmikjas5vkxgb5af3nw-python-crds-12.0.9
/gnu/store/iwlin46pkd0kh8ihf6iakcbmrg2xp1sc-python-czml3-2.3.0
/gnu/store/bbdhcysdn39m205mm52vsnpvyck1xwiz-python-ducc0-0.36.0
/gnu/store/x7ywqh573xs3jzj3kfhll4f9blagwcgk-python-mapsims-2.6.0
/gnu/store/aj7xda4624g26f2varkjj731z2fvwzwd-python-ndcube-2.3.0
/gnu/store/s5zqqdri6969ixbxmw66354kh15yqmyx-python-numexpr-2.9.0
/gnu/store/pscp7qm569g35035nfcnrjym8qa7m681-python-pixell-0.28.0
/gnu/store/ww7zm8pc9wxvgkmg3askhk4pv9yd1ln6-python-poppy-1.1.2
/gnu/store/9ya2i65kq0jqg9pa39wqfn4ybrd644kw-python-pysm3-3.4.1a1
/gnu/store/9y40q58hmcdmkaz84ca82ndgc7bnljk5-python-rad-0.23.0
/gnu/store/rg6ks17zijb0yy40psxwq2ihlvjyb703-python-roman-datamodels-0.23.0
/gnu/store/d1qig8wq4l4mnk7x2zzc3x96g0dxirn7-python-so-noise-models-0.0.0-0.fac881e
/gnu/store/3f63pv6xx1lm3pygbqs6z4955pw2nqhq-python-spectral-cube-0.6.6
/gnu/store/3hzg0m82qn3p4d3bvzalih36b5cbn6gk-python-statmorph-0.6.1
/gnu/store/hmdjc16wsn9mnw935jxs51jqg1bcbsvj-python-sunpy-soar-1.11.0
/gnu/store/6wznz1xldpcmqjj78czj7c2h5dxvrlbl-python-viresclient-0.12.1
/gnu/store/2vaks8h599zyzk6qyxc4ln47ldxd71vw-sextractor-2.28.2
/gnu/store/2iwfw2zw99n0sca6j8pkyzdcc5hkfh5z-ska-sdp-func-1.2.2
/gnu/store/86ddzf3xvi8r8sx115na7dsmzk14a190-stellarium-24.4-0.60b6bec
#+end_src
#+begin_example
> ./pre-inst-env guix refresh --list-dependent calceph python-ads
python-asdf-compression python-astropy-iers-data python-astroquery
python-ccdproc python-cdflib python-crds python-czml3 python-ducc0
python-mapsims python-ndcube python-numexpr python-pixell python-poppy
python-pysm3 python-rad python-roman-datamodels python-so-noise-models
python-spectral-cube python-statmorph python-sunpy-soar python-viresclient
sextractor ska-sdp-func stellarium
Building the following 59 packages would ensure 146 dependent packages are
rebuilt: python-zodipy <at> 1.1.0 python-spisea <at> 2.1.13 python-cesium <at> 0.12.1
python-naima <at> 0.10.0 python-kanon <at> 0.6.6 python-sncosmo <at> 2.11.2
python-halotools <at> 0.9.2 python-coolest <at> 0.1.9 scamp <at> 2.10.0
python-regularizepsf <at> 1.0.2 python-holodeck <at> 1.5.2
python-asdf-compression <at> 0.0.1-1.7cfd07c python-statmorph <at> 0.6.1
python-asdf-zarr <at> 0.0.4 ginga-qt5 <at> 5.2.0 python-astroplan <at> 0.10.1
python-astroalign <at> 2.6.1 python-sunkit-image <at> 0.5.1 python-poliastro <at> 0.17.0
python-scikit-allel <at> 1.3.13 python-scikit-survival <at> 0.22.2-1.bceb53e
python-viresclient <at> 0.12.1 variant-tools <at> 3.1.2 python-hicexplorer <at> 3.7.4
python-fanc <at> 0.9.28 python-hotspotsc <at> 1.1.1 python-celltypist <at> 1.6.2
python-muon <at> 0.1.6 scregseg <at> 0.1.3 r-doubletcollection <at> 1.1.0-1.c0d62f1
python-ikarus <at> 0.0.2 python-multivelo <at> 0.1.2 python-episcanpy <at> 0.4.0
python-liana-py <at> 1.4.0 python-metacells <at> 0.9.5 python-pynrrd <at> 1.0.0
python-sphinx-autodoc-typehints <at> 1.23.0 python-cellbender <at> 0.2.2 onionshare <at> 2.6
python-lsp-black <at> 1.3.0 python-pylsp-mypy <at> 0.6.9 python-pandera <at> 0.18.0
python-modin <at> 0.32.0 python-brian2tools <at> 0.3 python-gpy <at> 1.13.1
python-deepdish <at> 0.3.7 python-omero-py <at> 5.13.1 python-pyrodigal <at> 3.3.0
python-pyct <at> 0.5.0 python-mapsims <at> 2.6.0 python-webbpsf <at> 1.5.0
python-acstools <at> 3.7.2 python-jwst-reffiles <at> 1.0.1 python-sbpy <at> 0.5.0
python-pyxsim <at> 4.4.2 python-yt-astro-analysis <at> 1.1.3 python-glue-qt <at> 0.3.2
python-glue-astronomy <at> 0.10.0 python-radiospectra <at> 0.6.0c
#+end_example
Sharlatan Hellseher (27):
gnu: calceph: Update to 4.0.4.
gnu: sextractor: Update to 2.28.2.
gnu: stellarium: Update to 24.4-0.60b6bec.
gnu: python-ads: Update to 0.12.7.
gnu: python-asdf-compression: Update to 0.0.1-1.7cfd07c.
gnu: python-astropy-iers-data: Update to 0.2025.1.20.0.32.27.
gnu: python-astroquery: Update to 0.4.8.
gnu: python-ccdproc: Update to 2.4.3.
gnu: python-cdflib: Update to 1.3.3.
gnu: python-czml3: Update to 2.3.0.
gnu: python-crds: Update to 12.0.9.
gnu: python-ndcube: Update to 2.3.0.
gnu: python-numexpr: Update to 2.9.0.
gnu: python-poppy: Update to 1.1.2.
gnu: python-rad: Update to 0.23.0.
gnu: python-roman-datamodels: Update to 0.23.0.
gnu: Add python-pvextractor-bootstrap.
gnu: python-spectral-cube: Update to 0.6.6.
gnu: python-statmorph: Update to 0.6.1.
gnu: python-sunpy-soar: Update to 1.11.0.
gnu: python-viresclient: Update to 0.12.1.
gnu: Add ska-sdp-func.
gnu: Add python-ducc0.
gnu: Add python-pixell.
gnu: Add python-pysm3.
gnu: Add python-so-noise-models.
gnu: Add python-mapsims.
gnu/packages/astronomy.scm | 568 ++++++++++++++++++++++++++++--------
gnu/packages/maths.scm | 40 +++
gnu/packages/python-xyz.scm | 19 +-
3 files changed, 504 insertions(+), 123 deletions(-)
base-commit: ae217b7159ee202229eab39cd49adb9254cd4a96
--
2.47.1
GNU bug tracking system
Copyright (C) 1999 Darren O. Benham,
1997,2003 nCipher Corporation Ltd,
1994-97 Ian Jackson.