GNU bug report logs - #74806
[WIP PATCH] gnu: python-mathics-core: Add docs.

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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Danny Milosavljevic <dannym <at> friendly-machines.com>
To: guix-patches <at> gnu.org
Cc: Danny Milosavljevic <dannym <at> friendly-machines.com>
Subject: [WIP PATCH] gnu: python-mathics-core: Add docs.
Date: Thu, 12 Dec 2024 01:08:54 +0100

I would like help fixing a build failure here (latexmk parallelism problem):

! Undefined control sequence.
l.289 \InputIfFile

./source/mathics/doc/latex/mathics.pre:

  \InputIfFileExists {\jobname -281.pre}{}{}
  \InputIfFileExists {\jobname -282.pre}{}{}
  \InputIfFileExists {\jobname -283.pre}{}{}
  \InputIfFileExists {\jobname -284.pre}{}{}
  \InputIfFileExists {\jobname -285.pre}{}{}
  \InputIfFileExists {\jobname -286.pre}{}{}
  \InputIfFileExists {\jobname -287.pre}{}{}
  \InputIfFileExists {\jobname -288.pre}{}{}
  \InputIfFile

(ed note: Cut off in the original)

* gnu/packages/plotutils.scm (asymptote): Install files where latex will find them.
* gnu/packages/maths.scm (python-mathics-core): Add docs.

Change-Id: Id2dac5f9b4b3bdcfbb751a94263261fb69edb461
---
 gnu/packages/maths.scm     | 57 +++++++++++++++++++++++++++++++++++---
 gnu/packages/plotutils.scm |  4 +--
 2 files changed, 55 insertions(+), 6 deletions(-)

diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 60203f82a9..ec2e43c737 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -124,13 +124,14 @@ (define-module (gnu packages maths)
   #:use-module (gnu packages cpp)
   #:use-module (gnu packages datamash)
   #:use-module (gnu packages dbm)
-  #:use-module (gnu packages documentation)
   #:use-module (gnu packages django)
+  #:use-module (gnu packages documentation)
   #:use-module (gnu packages elf)
   #:use-module (gnu packages emacs)
   #:use-module (gnu packages file)
   #:use-module (gnu packages flex)
   #:use-module (gnu packages fltk)
+  #:use-module (gnu packages fonts)
   #:use-module (gnu packages fontutils)
   #:use-module (gnu packages freedesktop)
   #:use-module (gnu packages gettext)
@@ -152,6 +153,7 @@ (define-module (gnu packages maths)
   #:use-module (gnu packages llvm)
   #:use-module (gnu packages logging)
   #:use-module (gnu packages lua)
+  #:use-module (gnu packages plotutils)
   #:use-module (gnu packages gnome)
   #:use-module (gnu packages guile)
   #:use-module (gnu packages xorg)
@@ -10537,6 +10539,7 @@ (define-public python-mathics-core
               (sha256
                (base32
                 "0hhk2qq6swnprf9hliazwi3858sv3b3015g0mnm4ycdk5fsc7y57"))))
+    (outputs '("out" "doc"))
     (arguments
      `(;; <https://github.com/pytest-dev/pytest/pull/10173> is missing .closed
        #:test-flags '("-s")
@@ -10544,6 +10547,11 @@ (define-public python-mathics-core
        (modify-phases %standard-phases
          (add-after 'unpack 'patch-bugs
            (lambda _
+             (substitute* "mathics/doc/latex_doc.py"
+              (("^NUMBER_RE = .*")
+               ;; Prevent a match of "-7.0.0" (version number)
+               ; X"NUMBER_RE = re.compile(r\"([ -])(\d*(?<!\.)\.\d+|\d+\.(?!\.)\d*|\d+)(?![.0123456789])\")\n"
+               "NUMBER_RE = re.compile(r\"([ -])(\\d*(?<!\\.)\\.\\d+|\\d+\\.(?!\\.)\\d*|\\d+)(?![.0123456789])\")\n"))
              (substitute* "pyproject.toml"
               (("\"autoload/\\*.m\",")
                ;; They forgot to install autoload/rules/*.m
@@ -10551,15 +10559,56 @@ (define-public python-mathics-core
              ;; Prevent internet access by tests.
              (substitute* "mathics/builtin/files_io/files.py"
               (("https://raw.githubusercontent.com/Mathics3/mathics-core/master/README.rst")
-               (string-append (getcwd) "/README.rst")))))
+               (string-append (getcwd) "/README.rst")))
+             (substitute* "mathics/docpipeline.py"
+              ;; Undefined.
+              (("test_parameters[.]doc_even_if_error") "False"))))
+         ;; TODO: make latexdoc ; (cd mathics/doc/latex && $(MAKE) doc)
+         (add-after 'install 'build-docs
+           (lambda* (#:key inputs outputs #:allow-other-keys)
+             ; Would fuck up LOCAL_ROOT_DIR: (add-installed-pythonpath inputs outputs)
+             (setenv "PYTHONPATH" (getcwd))
+             (substitute* "mathics/settings.py"
+               (("^(ROOT_DIR = .*)" _ a) (string-append a "\nimport sys\nprint('XXROOT_DIR', ROOT_DIR, sys.stderr)\n")))
+             (setenv "HOME" "/tmp")
+             (mkdir-p "/tmp/.local/var/mathics")
+             (setenv "BASH" (which "bash"))
+             (invoke "make" "latexdoc")
+             ;; TODO: The other files.
+             (install-file "mathics/doc/latex/mathics-title.pdf"
+              (string-append (assoc-ref outputs "doc") "/share/doc/mathics"))))
          (add-before 'check 'prepare-locales
            (lambda _
              ;; Otherwise 210 tests fail because the real output would use
              ;; unicode arrow characters.  With this, only 18 (symbolic) tests fail.
              (setenv "MATHICS_CHARACTER_ENCODING" "ASCII"))))))
     (build-system pyproject-build-system)
-    (native-inputs (list python-pytest))
-    (inputs (list llvm))
+    (native-inputs (list python-pytest
+                         texlive-xetex
+                         font-latin-modern
+                         (texlive-updmap.cfg
+                          (list asymptote
+                                texlive-latexmk
+                                texlive-koma-script
+                                texlive-gensymb
+                                texlive-newpx
+                                texlive-xstring
+                                texlive-kastrup
+                                texlive-preprint
+                                texlive-listings
+                                texlive-paralist
+                                texlive-breqn
+                                texlive-environ
+                                texlive-colophon
+                                texlive-minitoc
+                                texlive-mlmodern
+                                texlive-palatino
+                                texlive-mathpazo
+                                texlive-pagella-otf
+                                texlive-tex-gyre-math))
+                         ghostscript
+                         bash))
+    (inputs (list llvm asymptote))
     (propagated-inputs (list python-mpmath
                              python-pint
                              python-palettable
diff --git a/gnu/packages/plotutils.scm b/gnu/packages/plotutils.scm
index d5b2f0d9fa..72faa6c31f 100644
--- a/gnu/packages/plotutils.scm
+++ b/gnu/packages/plotutils.scm
@@ -136,10 +136,10 @@ (define-public asymptote
                            (guix build emacs-utils))
       #:configure-flags
       #~(list (string-append "--enable-gc=" #$(this-package-input "libgc"))
-              (string-append "--with-latex=" #$output "/share/texmf/tex/latex")
+              (string-append "--with-latex=" #$output "/share/texmf-dist/tex/latex")
               (string-append "--with-context="
                              #$output
-                             "/share/texmf/tex/context/third"))
+                             "/share/texmf-dist/tex/context/third"))
       #:phases
       #~(modify-phases %standard-phases
           (add-after 'unpack 'locate-tirpc

base-commit: 8b65fdc182e7340946be8b1e7b688d03b96c3482
-- 
2.46.0

Message #8 received at 74806 <at> debbugs.gnu.org (full text, mbox):

From: Andreas Enge <andreas <at> enge.fr>
To: Danny Milosavljevic <dannym <at> friendly-machines.com>
Cc: 74806 <at> debbugs.gnu.org, Sharlatan Hellseher <sharlatanus <at> gmail.com>,
 Eric Bavier <bavier <at> posteo.net>
Subject: Re: [bug#74806] [WIP PATCH] gnu: python-mathics-core: Add docs.
Date: Wed, 22 Jan 2025 11:57:45 +0100

Hello Danny,

I tried to apply your patch, but cannot do it; probably the package was
updated during a recent python team cycle. Then I had a try at running
directly "pdflatex mathics.tex", but since this is missing autogenerated
filed I did not get any further.

Am Thu, Dec 12, 2024 at 01:08:54AM +0100 schrieb Danny Milosavljevic:
> ./source/mathics/doc/latex/mathics.pre:
>   \InputIfFileExists {\jobname -281.pre}{}{}

The space in the file name is suspicious. My guess is that this breaks
TeX parsing.

Andreas

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