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Date: Tue, 26 Nov 2024 13:31:03 +0000 Message-ID: <4f4ba29ceba204da1c4ffa69fcb85b6a68866ea0.1732627863.git.navid.afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.43.0 MIME-Version: 1.0 X-Debbugs-Cc: Laurent Gatto , Ricardo Wurmus , Simon Tournier Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [141.80.121.182] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3223-9.1.2019-28820.007 X-TM-AS-Result: No-10--4.509500-5.000000 X-TMASE-MatchedRID: 6SYb29c3rTTT2djP7DKoDlJTtM6CHKVOgdXztqOEBnDksZ3zvFw4d0GE JulcJx+mKehnph4mEVzABo6AR1sb2oqKGmXzWdcHb3Pl2Oyrc7BrcVVB7l3jO0F0yNa72jaj2nf Q5TtZSqiF4iKIJg6V0EQIPpUe12Ds8CsHqdsq1hfYeXOEzfM22Vztkif7r1iVcilEE+Pje89Vzq jGDXmIZgBkNACWqzGIJ3WlWJ04CLEkQKlZG6G7BMlw11t2Ev0U0880rd+wXIxQUfCcbhLOFCRn/ XsPzzcup+668OfRaNKr9R4QwfiiuDaXUWo+sMbYeFv61dDRnYf0c5qUjgqLKvYlQeU3xrH0XtGJ m2N/3yI= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--4.509500-5.000000 X-TMASE-Version: SMEX-14.0.0.3223-9.1.2019-28820.007 X-TM-SNTS-SMTP: 93310E8891197910F93C428408A5D1FA6A628AD44575373E9322D677C31698BD2000:F Received-SPF: pass client-ip=194.95.234.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=b2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, RCVD_IN_VALIDITY_RPBL_BLOCKED=0.001, RCVD_IN_VALIDITY_SAFE_BLOCKED=0.001, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-Debbugs-Envelope-To: submit Cc: Navid Afkhami X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) Change-Id: I181f036f5df65a7e1ec6fc1a6646da22686d5895 --- gnu/packages/cran.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 599238d0d8..a1e0213565 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -68,12 +68,15 @@ (define-module (gnu packages cran) #:use-module (gnu packages algebra) #:use-module (gnu packages autotools) #:use-module (gnu packages base) + #:use-module (gnu packages bash) #:use-module (gnu packages bioinformatics) #:use-module (gnu packages c) + #:use-module (gnu packages cmake) #:use-module (gnu packages compression) #:use-module (gnu packages crypto) #:use-module (gnu packages curl) #:use-module (gnu packages databases) + #:use-module (gnu packages debian) #:use-module (gnu packages fontutils) #:use-module (gnu packages fribidi) #:use-module (gnu packages gcc) @@ -39757,6 +39760,29 @@ (define-public r-highlight chunks.") (license license:gpl3+))) +(define-public r-highs + (package + (name "r-highs") + (version "0.1-10") + (source + (origin + (method url-fetch) + (uri (cran-uri "highs" version)) + (sha256 + (base32 "1vjmzbfydlm434fa1mkwwfcdhmn6sq4ppib26nxfa9zakr7h7q2c")))) + (properties `((upstream-name . "highs"))) + (build-system r-build-system) + (inputs (list bash-minimal)) + (propagated-inputs (list r-checkmate r-pkgconfig r-rcpp)) + (native-inputs (list cmake-minimal debianutils gfortran)) + (home-page "https://gitlab.com/roigrp/solver/highs") + (synopsis "'HiGHS' Optimization Solver") + (description + "R interface to @code{HiGHS}, an optimization solver. +It is designed for solving mixed-integer optimization problems +with quadratic or linear objectives and linear constraints.") + (license license:gpl2+))) + (define-public r-clustree (package (name "r-clustree") base-commit: 9b1fb12978482ffb6d37c456343f05609b28b3e8 -- 2.43.0 From debbugs-submit-bounces@debbugs.gnu.org Tue Nov 26 09:18:28 2024 Received: (at 74543-done) by debbugs.gnu.org; 26 Nov 2024 14:18:28 +0000 Received: from localhost ([127.0.0.1]:48246 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tFwOZ-0004Q7-Tj for submit@debbugs.gnu.org; Tue, 26 Nov 2024 09:18:28 -0500 Received: from b2062.mx.srv.dfn.de ([194.95.234.172]:35127) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tFwOX-0004Ps-Mi for 74543-done@debbugs.gnu.org; Tue, 26 Nov 2024 09:18:26 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:mime-version:message-id:date:date :in-reply-to:subject:subject:from:from:received; s=mdc; t= 1732630698; x=1734445099; bh=TrUsifP5fgsG96Rz4Py1auQkchfwdQqUEgD 2ybH3SLA=; b=ZXOiQqfiSvRpHW6z+KTPvYyNp02eqmgmJqXs8Lrr+sOOIFkBdTp AgGqAzW0pVyQl3GJjuLCtz2Nikyd1cqElzklBkrtwxwMY2iXdXOijykK6nZLaxGZ qHXRTwrvFT987qrK9Z3EhlLQM93+qDfKZhnymTvlgmseqgyCHdY+2+Nk= Received: from SW-IT-P-EX2.mdc-berlin.net (mgw2.mdc-berlin.de [141.80.113.60]) by b2062.mx.srv.dfn.de (Postfix) with ESMTPS id C37E416010D for <74543-done@debbugs.gnu.org>; Tue, 26 Nov 2024 15:18:18 +0100 (CET) Received: from localhost (92.116.217.69) by SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.2.1544.11; Tue, 26 Nov 2024 15:18:18 +0100 From: Ricardo Wurmus To: <74543-done@debbugs.gnu.org> Subject: Re: [PATCH] Packaged this tool for Guix proper with chnaged to the definition of the package. In-Reply-To: <4f4ba29ceba204da1c4ffa69fcb85b6a68866ea0.1732627863.git.navid.afkhami@mdc-berlin.de> Date: Tue, 26 Nov 2024 15:18:17 +0100 Message-ID: <874j3uf592.fsf@mdc-berlin.de> MIME-Version: 1.0 Content-Type: text/plain X-Originating-IP: [92.116.217.69] X-ClientProxiedBy: SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) To SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) X-TM-AS-Product-Ver: SMEX-14.0.0.3223-9.1.2019-28822.000 X-TM-AS-Result: No-10--6.475800-5.000000 X-TMASE-MatchedRID: 5+1rHnqhWUR6u8Ra7Bkp45GPSO6O5JCaZK1SF2R3edjsuqmh3K3azLZz SgrL658DmZagkORcFrJ44x9d+nX1W/ArB6nbKtYX2HlzhM3zNtl3SyVM8B3p1y0bcDo8j/RXu76 BDtgJlfNxg7svMtapLrAdecdWQCzFH4pNnFLAi66xSf0TfhYS0s0V5W/9S/Rp8MCoaWBDJMAkOi bk1cEfm37cGd19dSFd X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--6.475800-5.000000 X-TMASE-Version: SMEX-14.0.0.3223-9.1.2019-28822.000 X-TM-SNTS-SMTP: 8D4C319BBCEFE46ED20F1324191BCA2261C7EA1D715C7A9B18937BCA3A5635A32000:F X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 74543-done Cc: Navid Afkhami X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Hi, thanks for the patch. I made a couple of changes. We didn't need bash-minimal or debianutils as inputs, but did need "which". I also modified the description and the commit message. -- Ricardo From unknown Mon Jun 23 06:03:28 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Wed, 25 Dec 2024 12:24:09 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator