From debbugs-submit-bounces@debbugs.gnu.org Fri Sep 06 10:22:41 2024 Received: (at submit) by debbugs.gnu.org; 6 Sep 2024 14:22:42 +0000 Received: from localhost ([127.0.0.1]:53726 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1smZrF-0002QJ-J1 for submit@debbugs.gnu.org; Fri, 06 Sep 2024 10:22:41 -0400 Received: from lists.gnu.org ([209.51.188.17]:50256) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1smZrD-0002QB-Uv for submit@debbugs.gnu.org; Fri, 06 Sep 2024 10:22:40 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1smZrE-0007bL-83 for guix-patches@gnu.org; Fri, 06 Sep 2024 10:22:40 -0400 Received: from 9.mo583.mail-out.ovh.net ([178.32.96.204]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1smZrC-0005sM-Hq for guix-patches@gnu.org; Fri, 06 Sep 2024 10:22:39 -0400 Received: from director9.ghost.mail-out.ovh.net (unknown [10.108.9.253]) by mo583.mail-out.ovh.net (Postfix) with ESMTP id 4X0djR0Pg4z1T5h for ; Fri, 6 Sep 2024 14:22:34 +0000 (UTC) Received: from ghost-submission-55b549bf7b-cmj92 (unknown [10.108.54.198]) by director9.ghost.mail-out.ovh.net (Postfix) with ESMTPS id A65811FDF4; Fri, 6 Sep 2024 14:22:34 +0000 (UTC) Received: from ngraves.fr ([37.59.142.100]) by ghost-submission-55b549bf7b-cmj92 with ESMTPSA id UPDLGCoQ22bmVwQA8hmEfw (envelope-from ); Fri, 06 Sep 2024 14:22:34 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-100R003fa2b673f-723f-4a8e-919f-f889644c206b, ACA35F79429F979B6FBB9EE3B4047AB5B076CDB9) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 From: Nicolas Graves To: guix-patches@gnu.org Subject: [PATCH 0/3] Fix python development environment Date: Fri, 6 Sep 2024 16:20:37 +0200 Message-ID: <20240906142232.18550-1-ngraves@ngraves.fr> X-Mailer: git-send-email 2.45.2 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Ovh-Tracer-Id: 1164743455242773218 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgeeftddrudeiuddgjeejucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffoggfgsedtkeertdertddtnecuhfhrohhmpefpihgtohhlrghsucfirhgrvhgvshcuoehnghhrrghvvghssehnghhrrghvvghsrdhfrheqnecuggftrfgrthhtvghrnhepkeffgeetfffgffejgeejvdffgfdtvdeuueetgfefuedvjeegvdegjeejveeuueevnecukfhppeduvdejrddtrddtrddupdekuddrieejrddugeeirddvtdekpdefjedrheelrddugedvrddutddtnecuvehluhhsthgvrhfuihiivgeptdenucfrrghrrghmpehinhgvthepuddvjedrtddrtddruddpmhgrihhlfhhrohhmpehnghhrrghvvghssehnghhrrghvvghsrdhfrhdpnhgspghrtghpthhtohepuddprhgtphhtthhopehguhhigidqphgrthgthhgvshesghhnuhdrohhrghdpoffvtefjohhsthepmhhoheekfedpmhhouggvpehsmhhtphhouhht DKIM-Signature: a=rsa-sha256; bh=ZkO32b54txqZzDHQudXhnusJZxb6uBZ/TQ9bt+4hBaA=; c=relaxed/relaxed; d=ngraves.fr; h=From; s=ovhmo4487190-selector1; t=1725632555; v=1; b=xj94tqHkRBwKV0hHUlv33vNrOQSfJTu9ZIp38xS0TvBRBvI4yASIACnW9McsqHfy1sAVmIga IvZVOimzSWD7cV0rnOGXAui7CT/c5HsfsHojAlJcqnZSnW+Qf55D1BEpMJrYKeQ6/FI/Z4V3TbC Pmezo7ly5f6Xj5x5c2gQEcP1p7pT9yM/UF9X5yM0JUl4O89JSGPy43sFB6V8Gsc5w6oBFL99vwS +pW2e31V1EdWX3E+LkqmdQuyeUvOjdBAdPO8FXnz4jhdyd/hQGPYD/RSETWsBsNPSNixvQViY3j XWdmCGNQpFqngDeR1cqBzaqSd17P2d6ibrGNAUzBqwGtQ== Received-SPF: pass client-ip=178.32.96.204; envelope-from=ngraves@ngraves.fr; helo=9.mo583.mail-out.ovh.net X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_NONE=-0.0001, RCVD_IN_MSPIKE_H3=0.001, RCVD_IN_MSPIKE_WL=0.001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.3 (-) X-Debbugs-Envelope-To: submit Cc: ngraves@ngraves.fr X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) The python developping package twine was severely outdated and didn't work with pypi at all. This update fixes it. Nicolas Graves (3): gnu: python-readme-renderer: Update to 35.0. gnu: python-pkginfo: Update to 1.10.0. gnu: python-twine: Update to 5.1.1. gnu/packages/python-xyz.scm | 50 +++++++++++++++++-------------------- 1 file changed, 23 insertions(+), 27 deletions(-) -- 2.45.2 From debbugs-submit-bounces@debbugs.gnu.org Fri Sep 06 11:25:41 2024 Received: (at 73070) by debbugs.gnu.org; 6 Sep 2024 15:25:41 +0000 Received: from localhost ([127.0.0.1]:53883 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1smaqC-00068U-TE for submit@debbugs.gnu.org; Fri, 06 Sep 2024 11:25:41 -0400 Received: from 10.mo575.mail-out.ovh.net ([46.105.79.203]:53039) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1smaq9-00068D-RD for 73070@debbugs.gnu.org; Fri, 06 Sep 2024 11:25:39 -0400 Received: from director6.ghost.mail-out.ovh.net (unknown [10.109.140.131]) by mo575.mail-out.ovh.net (Postfix) with ESMTP id 4X0g686RqFz1hs6 for <73070@debbugs.gnu.org>; Fri, 6 Sep 2024 15:25:36 +0000 (UTC) Received: from ghost-submission-55b549bf7b-qxld6 (unknown [10.110.168.250]) by director6.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 8DC981FE8F; Fri, 6 Sep 2024 15:25:36 +0000 (UTC) Received: from ngraves.fr ([37.59.142.102]) by ghost-submission-55b549bf7b-qxld6 with ESMTPSA id VUGKEPAe22aWDQEAVMW8/Q (envelope-from ); Fri, 06 Sep 2024 15:25:36 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-102R0049af2dfad-5903-4764-89f6-4f4b7f94241a, ACA35F79429F979B6FBB9EE3B4047AB5B076CDB9) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 From: Nicolas Graves To: 73070@debbugs.gnu.org Subject: [PATCH 2/3] gnu: python-twine: Update to 5.1.1. 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The original message has been attached to this so you can view it or label similar future email. If you have any questions, see the administrator of that system for details. Content preview: * gnu/packages/python-xyz.scm (python-twine): Update to 5.1.1. [build-system]: Move to pyproject-build-system. [arguments]<#:test-flags>: Disable failing tests. [native-inputs]: Add python-pretend, py [...] Content analysis details: (1.3 points, 10.0 required) pts rule name description ---- ---------------------- -------------------------------------------------- 0.0 RCVD_IN_MSPIKE_H4 RBL: Very Good reputation (+4) [46.105.79.203 listed in wl.mailspike.net] 1.3 RCVD_IN_VALIDITY_RPBL RBL: Relay in Validity RPBL, https://senderscore.org/blocklistlookup/ [46.105.79.203 listed in bl.score.senderscore.com] -0.0 RCVD_IN_DNSWL_NONE RBL: Sender listed at https://www.dnswl.org/, no trust [46.105.79.203 listed in list.dnswl.org] -0.0 SPF_PASS SPF: sender matches SPF record 0.0 SPF_HELO_NONE SPF: HELO does not publish an SPF Record 0.0 RCVD_IN_MSPIKE_WL Mailspike good senders -0.0 T_SCC_BODY_TEXT_LINE No description available. X-Debbugs-Envelope-To: 73070 Cc: ngraves@ngraves.fr X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: 0.3 (/) * gnu/packages/python-xyz.scm (python-twine): Update to 5.1.1. [build-system]: Move to pyproject-build-system. [arguments]<#:test-flags>: Disable failing tests. [native-inputs]: Add python-pretend, python-pytest, python-pytest-socket. [propagated-inputs]: Remove python-tqdm, python-packaging. Add python-imporlib-metadata, python-keyring, python-rfc3986, python-rich and python-urllib3. Change-Id: I55dbcd646dec60cfe8ec226aed0cf3f8c59e2eeb --- gnu/packages/python-xyz.scm | 24 ++++++++++++++++++------ 1 file changed, 18 insertions(+), 6 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index c391f1d033..4e2bc4fb02 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -25710,21 +25710,33 @@ (define-public python-pkginfo (define-public python-twine (package (name "python-twine") - (version "1.15.0") + (version "5.1.1") (source (origin (method url-fetch) (uri (pypi-uri "twine" version)) (sha256 - (base32 "11rpd653zcgzkq3sgwkzs3mpxl3r5rij59745ni84ikv8smjmlm3")))) - (build-system python-build-system) + (base32 "1nr24gd5gm22b0jzb5qmw4swh8bshixmqm0kv4s38ay0758q584s")))) + (build-system pyproject-build-system) + (arguments + (list #:test-flags ;; Disable failing tests. + #~(list "-k" (string-append + "not test_pkginfo_returns_no_metadata" + " and not test_fails_rst_no_content")))) + (native-inputs + (list python-pretend + python-pytest + python-pytest-socket)) (propagated-inputs - (list python-tqdm - python-packaging + (list python-importlib-metadata + python-keyring python-pkginfo python-readme-renderer python-requests - python-requests-toolbelt)) + python-requests-toolbelt + python-rfc3986 + python-rich + python-urllib3)) (home-page "https://github.com/pypa/twine") (synopsis "Collection of utilities for interacting with PyPI") (description -- 2.45.2 From debbugs-submit-bounces@debbugs.gnu.org Fri Sep 06 11:25:42 2024 Received: (at 73070) by debbugs.gnu.org; 6 Sep 2024 15:25:42 +0000 Received: from localhost ([127.0.0.1]:53885 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1smaqD-00068e-HF for submit@debbugs.gnu.org; Fri, 06 Sep 2024 11:25:41 -0400 Received: from 10.mo584.mail-out.ovh.net ([188.165.33.109]:55235) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1smaq9-000689-Bz for 73070@debbugs.gnu.org; Fri, 06 Sep 2024 11:25:39 -0400 Received: from director10.ghost.mail-out.ovh.net (unknown [10.109.139.198]) by mo584.mail-out.ovh.net (Postfix) with ESMTP id 4X0g680BvHz1JR2 for <73070@debbugs.gnu.org>; Fri, 6 Sep 2024 15:25:35 +0000 (UTC) Received: from ghost-submission-55b549bf7b-6xjc7 (unknown [10.110.188.21]) by director10.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 8EAA21FEA6; Fri, 6 Sep 2024 15:25:35 +0000 (UTC) Received: from ngraves.fr ([37.59.142.102]) by ghost-submission-55b549bf7b-6xjc7 with ESMTPSA id kX9nGe8e22b5dgYA3nWYyA (envelope-from ); Fri, 06 Sep 2024 15:25:35 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-102R004319723c1-8c40-4348-b4f0-52d187899bfe, ACA35F79429F979B6FBB9EE3B4047AB5B076CDB9) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 From: Nicolas Graves To: 73070@debbugs.gnu.org Subject: [PATCH 1/3] gnu: python-pkginfo: Update to 1.10.0. Date: Fri, 6 Sep 2024 17:25:23 +0200 Message-ID: <20240906152532.23233-1-ngraves@ngraves.fr> X-Mailer: git-send-email 2.45.2 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Ovh-Tracer-Id: 2229000342469010146 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgeeftddrudeiuddgledtucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffoggfgsedtkeertdertddtnecuhfhrohhmpefpihgtohhlrghsucfirhgrvhgvshcuoehnghhrrghvvghssehnghhrrghvvghsrdhfrheqnecuggftrfgrthhtvghrnhepvddvleehkeeiffffkedtgeekvdekkeevgfeffeevfeekveefheeiffelfeehtefhnecuffhomhgrihhnpehlrghunhgthhhprggurdhnvghtnecukfhppeduvdejrddtrddtrddupdekuddrieejrddugeeirddvtdekpdefjedrheelrddugedvrddutddvnecuvehluhhsthgvrhfuihiivgeptdenucfrrghrrghmpehinhgvthepuddvjedrtddrtddruddpmhgrihhlfhhrohhmpehnghhrrghvvghssehnghhrrghvvghsrdhfrhdpnhgspghrtghpthhtohepuddprhgtphhtthhopeejfedtjedtseguvggssghughhsrdhgnhhurdhorhhgpdfovfetjfhoshhtpehmohehkeegpdhmohguvgepshhmthhpohhuth DKIM-Signature: a=rsa-sha256; bh=dgXP7QDb+deA0Tni9MnTasTslhc/bQqw0Fp32eSHq/4=; c=relaxed/relaxed; d=ngraves.fr; h=From; s=ovhmo4487190-selector1; t=1725636336; v=1; b=5Ekmg+mSPAlekR1eKL8HI/9eEU+OTep7o8inJsQoWrfY6RAqaIne4piyo/gXUItybRyCEB9h dZ6FJ+AQvK1ZWL15QHAVDnKn2XvHs7UTsgrxTTxDvDYonM6yVDty3UE/EPhIMGWzfZTzcOJHW3w e+U6wICBpuTHYbwGGlDh9YFG79efsHHu2FGKlMZalAS0ura8E2yo3EbX4rdsgFL7JAD7trjOkFc Ky0YKLnE0cMQ9hf/ViZjvuhOXf2xQYoK2gq4StvQzCDgW1hnNKqfoJalvnCyLkviqLde4AdQrRq eHcO1mS9KPmrMAtuR06XvVWQqrCxX+8q3BZXqRb9oKEsA== X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 Cc: ngraves@ngraves.fr X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/python-xyz.scm (python-pkginfo): Update to 1.10.0. [native-inputs]: Add python-wheel. Change-Id: I682773a5a5c36c9a2ffd9ce8e96048c08a7a174e --- gnu/packages/python-xyz.scm | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index f28054a489..c391f1d033 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -25687,16 +25687,16 @@ (define-public python-tqdm (define-public python-pkginfo (package (name "python-pkginfo") - (version "1.9.6") + (version "1.10.0") (source (origin (method url-fetch) (uri (pypi-uri "pkginfo" version)) (sha256 - (base32 "0inh57664sx2vlbd3913dsc9nz21ysb9vk591qpkg90qhxp8kmcg")))) + (base32 "15v2mycr7m4ld5wp1sl9flqjjv8zdgc5rkgfz1wxn44d74skixsx")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest)) + (list python-pytest python-wheel)) (home-page "https://code.launchpad.net/~tseaver/pkginfo/trunk") (synopsis "Query metadatdata from sdists, bdists, and installed packages") (description -- 2.45.2 From debbugs-submit-bounces@debbugs.gnu.org Fri Sep 06 11:25:44 2024 Received: (at 73070) by debbugs.gnu.org; 6 Sep 2024 15:25:44 +0000 Received: from localhost ([127.0.0.1]:53887 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1smaqG-00068u-0d for submit@debbugs.gnu.org; Fri, 06 Sep 2024 11:25:44 -0400 Received: from 15.mo583.mail-out.ovh.net ([178.33.107.29]:43447) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1smaqB-00068H-Rt for 73070@debbugs.gnu.org; Fri, 06 Sep 2024 11:25:40 -0400 Received: from director8.ghost.mail-out.ovh.net (unknown [10.109.176.203]) by mo583.mail-out.ovh.net (Postfix) with ESMTP id 4X0g6B68Lnz1ScH for <73070@debbugs.gnu.org>; Fri, 6 Sep 2024 15:25:38 +0000 (UTC) Received: from ghost-submission-55b549bf7b-xn94s (unknown [10.110.118.84]) by director8.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 74A101FEA5; Fri, 6 Sep 2024 15:25:38 +0000 (UTC) Received: from ngraves.fr ([37.59.142.105]) by ghost-submission-55b549bf7b-xn94s with ESMTPSA id V4jZA/Ie22b5FwEA5hDZTQ (envelope-from ); Fri, 06 Sep 2024 15:25:38 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-105G006aec5067a-dcd2-4fb6-aaad-eddd77cad0a4, ACA35F79429F979B6FBB9EE3B4047AB5B076CDB9) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 From: Nicolas Graves To: 73070@debbugs.gnu.org Subject: [PATCH 3/3] gnu: python-altair: Update to 5.3.0. Date: Fri, 6 Sep 2024 17:25:25 +0200 Message-ID: <20240906152532.23233-3-ngraves@ngraves.fr> X-Mailer: git-send-email 2.45.2 In-Reply-To: <20240906152532.23233-1-ngraves@ngraves.fr> References: <20240906152532.23233-1-ngraves@ngraves.fr> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-Ovh-Tracer-Id: 2229844769478402786 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgeeftddrudeiuddgledtucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffojghfgggtgfesthekredtredtjeenucfhrhhomheppfhitgholhgrshcuifhrrghvvghsuceonhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrqeenucggtffrrghtthgvrhhnpedvleelgeeffeetleekueegvdfhtedvueffiefhkedtleejkeduveelgfdufeduleenucfkphepuddvjedrtddrtddruddpkedurdeijedrudegiedrvddtkedpfeejrdehledrudegvddruddtheenucevlhhushhtvghrufhiiigvpedtnecurfgrrhgrmhepihhnvghtpeduvdejrddtrddtrddupdhmrghilhhfrhhomhepnhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrpdhnsggprhgtphhtthhopedupdhrtghpthhtohepjeeftdejtdesuggvsggsuhhgshdrghhnuhdrohhrghdpoffvtefjohhsthepmhhoheekfedpmhhouggvpehsmhhtphhouhht DKIM-Signature: a=rsa-sha256; bh=mXoef88T9EjHFIqd2A7Kt7B+394PxoXP8fF+CIk2D6M=; c=relaxed/relaxed; d=ngraves.fr; h=From; s=ovhmo4487190-selector1; t=1725636339; v=1; b=N5Xy7tmZ21GbL86VI6hGk8Irs71B94P2orGA57rG3jK92mZ9Hx0U2WNrqVzY8N+a2KQ4q+eR LS3aaq9UVkuglU+VsE/e9L4suycKipnwsNxjCgiQrOjI0lXm/oOLunm6fU+wIC+z6ODuZYOGae2 Rs7kiCYNz3MOLGNqtqUoAwiZXojp1uSQsuV+AjK45YxX+YbE8YpK7V67TpRKcW1BRXPaknxgkWa 4hcL+2m1rynby027AGAcCZgpxWHR7/JZdYQIXkxq/tcaWzYleNv/ydl8OtXN3staUoAYMVDbW82 Ut76IbT0yGDtnAD7YA31S4fOT3OcpSaubpUyjvmQbDCbg== X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 Cc: ngraves@ngraves.fr X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/statistics.scm (python-altair): Update to 5.3.0. [arguments]<#:test-flags>: Add failing tests, reorganize. Change-Id: I695e63e5395f40997ab59706240b8b059778b0ad --- gnu/packages/statistics.scm | 29 +++++++++++++++++++++-------- 1 file changed, 21 insertions(+), 8 deletions(-) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index af64cbd99d..bca7b763a1 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -21,6 +21,7 @@ ;;; Copyright © 2023 Felix Gruber ;;; Copyright © 2023 Troy Figiel ;;; Copyright © 2024 Vinicius Monego +;;; Copyright © 2024 Nicolas Graves ;;; ;;; This file is part of GNU Guix. ;;; @@ -2113,7 +2114,7 @@ (define-public python-vega-datasets (define-public python-altair (package (name "python-altair") - (version "5.0.1") + (version "5.3.0") (source (origin (method git-fetch) ; no tests in PyPI (uri (git-reference @@ -2122,15 +2123,27 @@ (define-public python-altair (file-name (git-file-name name version)) (sha256 (base32 - "1r74v5n51br9pjhxdzrr62cdgnwkapci93aifnl8dqmfpizfpd7d")))) + "1lx3pkphi36pljns6jjxhyn9fbrana8f1y6gcg4yca48nvwlfssl")))) (build-system pyproject-build-system) (arguments - ;; First two open an external connection. - ;; Last introduces a circular dependency on altair-viewer. - (list #:test-flags #~(list "-k" (string-append - "not test_from_and_to_json_roundtrip" - " and not test_render_examples_to_chart" - " and not test_save_html")))) + (list #:test-flags + ;; XXX: This test file requires hard to package python-anywidgets. + #~(list "--ignore=tests/test_jupyter_chart.py" + "-k" (string-join + (list + ;; these tests open an external connection. + "not test_from_and_to_json_roundtrip" + "test_render_examples_to_chart" + ;; introduces a circular dependency on altair-viewer. + "not test_save_html" + ;; these tests require the vl-convert vega compiler + "test_vegalite_compiler" + "test_to_dict_with_format_vega" + "test_to_json_with_format_vega" + "test_to_url" + "test_renderer_with_none_embed_options" + "test_jupyter_renderer_mimetype") + " and not ")))) (propagated-inputs (list python-jinja2 python-jsonschema python-numpy -- 2.45.2 From debbugs-submit-bounces@debbugs.gnu.org Sat Sep 21 18:51:13 2024 Received: (at 73070) by debbugs.gnu.org; 21 Sep 2024 22:51:13 +0000 Received: from localhost ([127.0.0.1]:40441 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8wa-0005Je-Mn for submit@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:13 -0400 Received: from mailtransmit05.runbox.com ([185.226.149.38]:59494) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8wY-0005JK-I0 for 73070@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:11 -0400 Received: from mailtransmit03.runbox ([10.9.9.163] helo=aibo.runbox.com) by mailtransmit05.runbox.com with esmtps (TLS1.2) tls TLS_ECDHE_RSA_WITH_AES_128_GCM_SHA256 (Exim 4.93) (envelope-from ) id 1ss8u0-00C6fr-HG for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:32 +0200 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=futurile.net; s=selector1; h=Content-Transfer-Encoding:MIME-Version: References:In-Reply-To:Message-ID:Date:Subject:To:From; bh=aD/Y01Ud5X/e4A8kR6tFx5cpJjvb+jFR5gmtbMFhgX8=; b=SeMKcCl4pHfb3ksuCj9ZCys6jC JD2sP6guSEUxS7HTA4ULDcyML6xSX84foZTchr9SDTkYG7N1ybiDk1ccCdr10BlkUn423b5MsqYKi C4fqxr/+SyQqYJBQ1umFlL/vnjNBMxRyVI7Tn3zBuNYjv6z0X7rsyXVvo7jPfVbxMskEohevRQ4v3 JW98uaauKhr5hspYqWk/fa65wupGGwgL0hOVkX0I7i+ty3jaR1PyVW6ayICL2r+HHUwpUqHsOf3CT y4a2CrDRtjOkxgEjzojbhxqZJ7GJPM0WhGYFZXJB+XBEqcecep+zNv4lQxuJOop/S5OQA+ueMalnO 9J81EC9Q==; Received: from [10.9.9.73] (helo=submission02.runbox) by mailtransmit03.runbox with esmtp (Exim 4.86_2) (envelope-from ) id 1ss8tv-0002JE-S6 for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:32 +0200 Received: by submission02.runbox with esmtpsa [Authenticated ID (641962)] (TLS1.2:ECDHE_SECP256R1__RSA_SHA256__AES_256_GCM:256) (Exim 4.93) id 1ss8tu-00CplG-VX for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:27 +0200 From: Steve George To: 73070@debbugs.gnu.org Subject: [PATCH v2 2/4] gnu: python-readme-renderer: Update to 41.0. Date: Sat, 21 Sep 2024 23:47:58 +0100 Message-ID: <17b3c3519e3ac639a55743378f2ce44fd993c652.1726958372.git.steve@futurile.net> X-Mailer: git-send-email 2.46.0 In-Reply-To: References: <20240906142232.18550-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Debbugs-Cc: lars@6xq.net, marius@gnu.org, me@bonfacemunyoki.com, sharlatanus@gmail.com, tanguy@bioneland.org, jgart@dismail.de Content-Transfer-Encoding: 8bit X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) From: Ricardo Wurmus * gnu/packages/python-xyz.scm (python-readme-renderer): Update to 41.0. [build-system]: Use pyproject-build-system. [arguments]: Delete 'loosen-cmarkgfm-dependency phase; replace custom 'check phase with #:test-flags. [native-inputs]: Add python-wheel; remove python-mock. Reviewed-by: Steve George Change-Id: I47cef84089384d2cf760c166fed9147863d1a415 --- gnu/packages/python-xyz.scm | 42 ++++++++++++++++++------------------- 1 file changed, 20 insertions(+), 22 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index f79821e86d..503d8f510f 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -32015,38 +32015,36 @@ (define-public python-blessed (define-public python-readme-renderer (package (name "python-readme-renderer") - (version "34.0") + (version "41.0") (source (origin (method url-fetch) (uri (pypi-uri "readme_renderer" version)) (sha256 (base32 - "1c75h9znffc2lh4j56yg23l5ifj5l8fbdq3kfigi8vbh45zx3d6z")))) - (build-system python-build-system) + "1xvkf2i075rdqkwdrcrw4xglziqd7qs5lb2rbxr5snizi7ji2jsg")))) + (build-system pyproject-build-system) (arguments - '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'loosen-cmarkgfm-dependency - (lambda _ - ;; Permit newer versions of cmarkgfm. - (substitute* "setup.py" - (("cmarkgfm>=0\\.5\\.0,<0\\.7\\.0") - "cmarkgfm>=0.5.0")))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - ;; The GFM tests fail due to slight differences in the - ;; generated vs expected HTML due to using a more - ;; recent bleach version (see: - ;; https://github.com/pypa/readme_renderer/issues/234). - (invoke "pytest" "-vv" "-k" "not GFM"))))))) - (propagated-inputs - (list python-bleach python-docutils python-pygments - + (list + #:test-flags + '(list "-k" + (string-append + ;; These tests fail due to slight differences in the generated + ;; vs expected HTML, e.g. because of difference in whitespace or + ;; line breaks. (See also + ;; https://github.com/pypa/readme_renderer/issues/234). + "not test_md_fixtures[test_CommonMark_008.md]" + " and not test_rst_fixtures[test_rst_008.rst]" + " and not GFM")))) + (propagated-inputs + (list python-bleach + python-docutils + python-pygments ;; Optional dependencies. python-cmarkgfm)) ;required by postorius (native-inputs - (list python-mock python-pytest)) + (list python-pytest + python-wheel)) (home-page "https://github.com/pypa/readme_renderer") (synopsis "Render README files in Warehouse") (description -- 2.46.0 From debbugs-submit-bounces@debbugs.gnu.org Sat Sep 21 18:51:21 2024 Received: (at 73070) by debbugs.gnu.org; 21 Sep 2024 22:51:21 +0000 Received: from localhost ([127.0.0.1]:40451 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8wj-0005KH-AP for submit@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:21 -0400 Received: from mailtransmit05.runbox.com ([185.226.149.38]:59510) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8we-0005JS-4G for 73070@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:16 -0400 Received: from mailtransmit02.runbox ([10.9.9.162] helo=aibo.runbox.com) by mailtransmit05.runbox.com with esmtps (TLS1.2) tls TLS_ECDHE_RSA_WITH_AES_128_GCM_SHA256 (Exim 4.93) (envelope-from ) id 1ss8u8-00C6gB-0U for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:40 +0200 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=futurile.net; s=selector1; h=Content-Transfer-Encoding:MIME-Version: References:In-Reply-To:Message-ID:Date:Subject:To:From; bh=/J1JDGfaTiZPUot13/PRMNoHd2o6iYIA/YIZXaNGLho=; b=6p7DMdKjf5/703rRHCnjlyrAY7 0fmevyGS36YmYiqRl1rGTyz+hXl8NRZSy0kxPpeiYWX+enUSZ2w0NYCJHVYiJhPR9UJ4n9cDrkXJ8 /TLY7jjVSH2X4OfsWq/6i39lKs3bR9OmvZgKUCLdRLeg59MAzpXi3OY4Lk9QpRHn0lpAKtEyhlBz6 XxosGW6KSgvD5v1rhLS/Nkg2mfcP1tTCEUiPPJDvtuyDFYvh+JE6lK2o8JVkdCugzefUaH5Kv+ilW ggOP3R8vNvAPXfzcAN7RnGobNw9FE45D6hENeXF/uTuBaOb0pcuccSTm+jP61AYFjhj4rmCwGZPAy fTrE+iAg==; Received: from [10.9.9.74] (helo=submission03.runbox) by mailtransmit02.runbox with esmtp (Exim 4.86_2) (envelope-from ) id 1ss8u7-0002Kb-Nk for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:39 +0200 Received: by submission03.runbox with esmtpsa [Authenticated ID (641962)] (TLS1.2:ECDHE_SECP256R1__RSA_SHA256__AES_256_GCM:256) (Exim 4.93) id 1ss8tt-008ivT-6c for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:25 +0200 From: Steve George To: 73070@debbugs.gnu.org Subject: [PATCH v2 0/4] Series updating python-twine & python-altair Date: Sat, 21 Sep 2024 23:47:56 +0100 Message-ID: X-Mailer: git-send-email 2.46.0 In-Reply-To: <20240906142232.18550-1-ngraves@ngraves.fr> References: <20240906142232.18550-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Debbugs-Cc: lars@6xq.net, marius@gnu.org, me@bonfacemunyoki.com, sharlatanus@gmail.com, tanguy@bioneland.org, jgart@dismail.de Content-Transfer-Encoding: 8bit X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Revision and review of original series sent by Nicolas Graves. Review: * python-pkginfo * can't be updated beyond 1.10.0 due to python-twine constraint of <1.11.0 * checked pypy hash * patch applies cleanly, linted and builds * python-readme-renderer * missing from Nicolas' original series * from python-team b1fbfe5b55b85e44d4f3e60c3ae6ec9bff71bf11 * updated to 41.0 * checked pypy hash * removed python-setuptools due to Lint warning * patch applies, linted, built * python-twine * checked pypy hash; built; linted * test installed * python-altair * built; linted * test imported * Re-roll to trigger QA Nicolas Graves via Guix-patches via (3): gnu: python-pkginfo: Update to 1.10.0. gnu: python-twine: Update to 5.1.1. gnu: python-altair: Update to 5.3.0. Ricardo Wurmus (1): gnu: python-readme-renderer: Update to 41.0. gnu/packages/python-xyz.scm | 83 +++++++++++++++++++++---------------- gnu/packages/statistics.scm | 29 +++++++++---- 2 files changed, 68 insertions(+), 44 deletions(-) base-commit: 9d75215a59629ab224154ef6b843043289291f81 -- 2.46.0 From debbugs-submit-bounces@debbugs.gnu.org Sat Sep 21 18:51:22 2024 Received: (at 73070) by debbugs.gnu.org; 21 Sep 2024 22:51:22 +0000 Received: from localhost ([127.0.0.1]:40453 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8wj-0005KN-PE for submit@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:22 -0400 Received: from mailtransmit04.runbox.com ([185.226.149.37]:36970) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8we-0005JV-Uu for 73070@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:17 -0400 Received: from mailtransmit02.runbox ([10.9.9.162] helo=aibo.runbox.com) by mailtransmit04.runbox.com with esmtps (TLS1.2) tls TLS_ECDHE_RSA_WITH_AES_128_GCM_SHA256 (Exim 4.93) (envelope-from ) id 1ss8u7-00C0gj-De for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:39 +0200 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=futurile.net; s=selector1; h=Content-Transfer-Encoding:MIME-Version: References:In-Reply-To:Message-ID:Date:Subject:To:From; bh=Fyf2cKMZK2RBHvPp6Jp2igWO5jbHbk+9LiioKfaFh4E=; b=xCwM23+eCK/hZcIduM0ETwsLXe Yt20gcKVhdtAnMrzjbKO5UYsXUyaoad/j79G1Hc1Op/10blWwVuwsVXgcwv49CZHASIRQ5wvCsdrh Q/Rl1fd1VsBNtpnQ9vZ29X1NQrPDIIohotCQs4LTWIy91X+F+rNLeCwL2SlFcf3wzZK8G5JBNVVq9 /ZJhlncUCOqJ449PR6K78AYpProb1lunHrsXhmgqZJ0yjphKYNZBWDvyrh0M16dqnGg5SPrlCCH8a EQZ/p5NAhEyj2Yhn5raBN1efGKVzYczIzHWf2gZ3a8SdBLnfTPeyZ5GAuFNBg/j/NDwr3oU+ojDeH 4KaMkVkA==; Received: from [10.9.9.72] (helo=submission01.runbox) by mailtransmit02.runbox with esmtp (Exim 4.86_2) (envelope-from ) id 1ss8u7-0002KW-5R for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:39 +0200 Received: by submission01.runbox with esmtpsa [Authenticated ID (641962)] (TLS1.2:ECDHE_SECP256R1__RSA_SHA256__AES_256_GCM:256) (Exim 4.93) id 1ss8tu-009sgM-97 for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:26 +0200 From: Steve George To: 73070@debbugs.gnu.org Subject: [PATCH v2 1/4] gnu: python-pkginfo: Update to 1.10.0. Date: Sat, 21 Sep 2024 23:47:57 +0100 Message-ID: <1aed5ae58a801c71ebae2277614e20a3928facbd.1726958372.git.steve@futurile.net> X-Mailer: git-send-email 2.46.0 In-Reply-To: References: <20240906142232.18550-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Debbugs-Cc: lars@6xq.net, marius@gnu.org, me@bonfacemunyoki.com, sharlatanus@gmail.com, tanguy@bioneland.org, jgart@dismail.de Content-Transfer-Encoding: 8bit X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) From: Nicolas Graves via Guix-patches via * gnu/packages/python-xyz.scm (python-pkginfo): Update to 1.10.0. [native-inputs]: Add python-wheel. Reviewed-by: Steve George Change-Id: I682773a5a5c36c9a2ffd9ce8e96048c08a7a174e --- gnu/packages/python-xyz.scm | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 6975cca1f7..f79821e86d 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -25702,16 +25702,17 @@ (define-public python-tqdm (define-public python-pkginfo (package (name "python-pkginfo") - (version "1.9.6") + (version "1.10.0") (source (origin (method url-fetch) (uri (pypi-uri "pkginfo" version)) (sha256 - (base32 "0inh57664sx2vlbd3913dsc9nz21ysb9vk591qpkg90qhxp8kmcg")))) + (base32 + "15v2mycr7m4ld5wp1sl9flqjjv8zdgc5rkgfz1wxn44d74skixsx")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest)) + (list python-pytest python-wheel)) (home-page "https://code.launchpad.net/~tseaver/pkginfo/trunk") (synopsis "Query metadatdata from sdists, bdists, and installed packages") (description -- 2.46.0 From debbugs-submit-bounces@debbugs.gnu.org Sat Sep 21 18:51:22 2024 Received: (at 73070) by debbugs.gnu.org; 21 Sep 2024 22:51:22 +0000 Received: from localhost ([127.0.0.1]:40455 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8wk-0005KQ-3Z for submit@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:22 -0400 Received: from mailtransmit04.runbox.com ([185.226.149.37]:36974) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8we-0005JU-Ul for 73070@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:20 -0400 Received: from mailtransmit03.runbox ([10.9.9.163] helo=aibo.runbox.com) by mailtransmit04.runbox.com with esmtps (TLS1.2) tls TLS_ECDHE_RSA_WITH_AES_128_GCM_SHA256 (Exim 4.93) (envelope-from ) id 1ss8u8-00C0gn-08 for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:40 +0200 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=futurile.net; s=selector1; h=Content-Transfer-Encoding:Content-Type: MIME-Version:References:In-Reply-To:Message-ID:Date:Subject:To:From; bh=0X+kITaMpRp94fnUzoKFTJvTUYYbXmHnL7DOvzMvUT0=; b=nZvjdPb7FQAn2EQ6I7VWrKuXz3 B+pNe/oesXDvv3FfH0UBEKBzlsE/T4aFFHjgfvWKNUWfXNRykHiFCwIkpjLMpHRXz1mTAfwW6fxZz XXZb0YAVa2NPbleBize69w+uYoBGH2DXXVz5JvyqYo/TLGITl4T9PcPhvtbppgFu/AcZp+17EIlDI 9tMZ0tzBq0zQ+0gRLvFLOFF2NCxxbIBuJk0eu3gamUeIRJ74882dn9Ikk73TjmP1jX4u14f0a34FK OUw3nCCIFgA/iVdKhb/2w5x1+/4QO5/v2DLqfb0Ls0JBXQt+g5FHtsyUPbNObv7EweCn+SDjVlRkr mYk+Uehg==; Received: from [10.9.9.72] (helo=submission01.runbox) by mailtransmit03.runbox with esmtp (Exim 4.86_2) (envelope-from ) id 1ss8u7-0002JT-NK for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:39 +0200 Received: by submission01.runbox with esmtpsa [Authenticated ID (641962)] (TLS1.2:ECDHE_SECP256R1__RSA_SHA256__AES_256_GCM:256) (Exim 4.93) id 1ss8tw-009skX-B5 for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:28 +0200 From: Steve George To: 73070@debbugs.gnu.org Subject: [PATCH v2 4/4] gnu: python-altair: Update to 5.3.0. Date: Sat, 21 Sep 2024 23:48:00 +0100 Message-ID: <947f110df38bf122656bdf6384d2ae979a59ad92.1726958372.git.steve@futurile.net> X-Mailer: git-send-email 2.46.0 In-Reply-To: References: <20240906142232.18550-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Debbugs-Cc: lars@6xq.net, marius@gnu.org, me@bonfacemunyoki.com, sharlatanus@gmail.com, tanguy@bioneland.org, jgart@dismail.de Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) From: Nicolas Graves via Guix-patches via * gnu/packages/statistics.scm (python-altair): Update to 5.3.0. [arguments]<#:test-flags>: Add failing tests, reorganize. Reviewed-by: Steve George Change-Id: I695e63e5395f40997ab59706240b8b059778b0ad --- gnu/packages/statistics.scm | 29 +++++++++++++++++++++-------- 1 file changed, 21 insertions(+), 8 deletions(-) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 103a857317..b8de5a1d93 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -21,6 +21,7 @@ ;;; Copyright © 2023 Felix Gruber ;;; Copyright © 2023 Troy Figiel ;;; Copyright © 2024 Vinicius Monego +;;; Copyright © 2024 Nicolas Graves ;;; ;;; This file is part of GNU Guix. ;;; @@ -2108,7 +2109,7 @@ (define-public python-vega-datasets (define-public python-altair (package (name "python-altair") - (version "5.0.1") + (version "5.3.0") (source (origin (method git-fetch) ; no tests in PyPI (uri (git-reference @@ -2117,15 +2118,27 @@ (define-public python-altair (file-name (git-file-name name version)) (sha256 (base32 - "1r74v5n51br9pjhxdzrr62cdgnwkapci93aifnl8dqmfpizfpd7d")))) + "1lx3pkphi36pljns6jjxhyn9fbrana8f1y6gcg4yca48nvwlfssl")))) (build-system pyproject-build-system) (arguments - ;; First two open an external connection. - ;; Last introduces a circular dependency on altair-viewer. - (list #:test-flags #~(list "-k" (string-append - "not test_from_and_to_json_roundtrip" - " and not test_render_examples_to_chart" - " and not test_save_html")))) + (list #:test-flags + ;; XXX: This test file requires hard to package python-anywidgets. + #~(list "--ignore=tests/test_jupyter_chart.py" + "-k" (string-join + (list + ;; these tests open an external connection. + "not test_from_and_to_json_roundtrip" + "test_render_examples_to_chart" + ;; introduces a circular dependency on altair-viewer. + "not test_save_html" + ;; these tests require the vl-convert vega compiler + "test_vegalite_compiler" + "test_to_dict_with_format_vega" + "test_to_json_with_format_vega" + "test_to_url" + "test_renderer_with_none_embed_options" + "test_jupyter_renderer_mimetype") + " and not ")))) (propagated-inputs (list python-jinja2 python-jsonschema python-numpy -- 2.46.0 From debbugs-submit-bounces@debbugs.gnu.org Sat Sep 21 18:51:40 2024 Received: (at 73070) by debbugs.gnu.org; 21 Sep 2024 22:51:40 +0000 Received: from localhost ([127.0.0.1]:40457 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8x1-0005L0-MO for submit@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:40 -0400 Received: from mailtransmit05.runbox.com ([185.226.149.38]:58354) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1ss8wi-0005Jq-7S for 73070@debbugs.gnu.org; Sat, 21 Sep 2024 18:51:20 -0400 Received: from mailtransmit02.runbox ([10.9.9.162] helo=aibo.runbox.com) by mailtransmit05.runbox.com with esmtps (TLS1.2) tls TLS_ECDHE_RSA_WITH_AES_128_GCM_SHA256 (Exim 4.93) (envelope-from ) id 1ss8uC-00C6gR-0Q for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:44 +0200 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=futurile.net; s=selector1; h=Content-Transfer-Encoding:MIME-Version: References:In-Reply-To:Message-ID:Date:Subject:To:From; bh=ygWIqM9lTe0ZtUoJnpJL4ldjLs6cOhApk3CGw7u3kx0=; b=OIfLI+mVfr/dRLXMdjtRaROOTc lSe2uI9Q8AUQdlcORBTrlMGxUOnF+dzghD4SeF6gtCVSzhttWImzK8rA6YjF92hjyoAFvItLfdw6Y 4GYCsYcadDGklLKiL+dfiKtxNrxtP5YOB3dgmK8m1yoF876YfBcBmAmYcgOUVAwhPuDOxVclZ1vs2 g08RxO2vlnhTGQjQIZSJRulCheI8X6p73d1Bbw5sT6sd2/cnvaxJVCBqNoLwv3akG1UmeJFD+GO+P Pf881W8FKIVMyMQuxgZq+fmPx6uCVSNknagJMUSR0F+0PPhMWG2yr2QEKo/TKii7kRctu6iBeFW5q aIr/nGsQ==; Received: from [10.9.9.72] (helo=submission01.runbox) by mailtransmit02.runbox with esmtp (Exim 4.86_2) (envelope-from ) id 1ss8u6-0002KT-Mr for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:38 +0200 Received: by submission01.runbox with esmtpsa [Authenticated ID (641962)] (TLS1.2:ECDHE_SECP256R1__RSA_SHA256__AES_256_GCM:256) (Exim 4.93) id 1ss8tv-009skT-Li for 73070@debbugs.gnu.org; Sun, 22 Sep 2024 00:48:27 +0200 From: Steve George To: 73070@debbugs.gnu.org Subject: [PATCH v2 3/4] gnu: python-twine: Update to 5.1.1. Date: Sat, 21 Sep 2024 23:47:59 +0100 Message-ID: <9d91b65379b3acbc86484f49f5ce688fbd29b85b.1726958372.git.steve@futurile.net> X-Mailer: git-send-email 2.46.0 In-Reply-To: References: <20240906142232.18550-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Debbugs-Cc: lars@6xq.net, marius@gnu.org, me@bonfacemunyoki.com, sharlatanus@gmail.com, tanguy@bioneland.org, jgart@dismail.de Content-Transfer-Encoding: 8bit X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) From: Nicolas Graves via Guix-patches via * gnu/packages/python-xyz.scm (python-twine): Update to 5.1.1. [build-system]: Move to pyproject-build-system. [arguments]<#:test-flags>: Disable failing tests. [native-inputs]: Add python-pretend, python-pytest, python-pytest-socket. [propagated-inputs]: Remove python-tqdm, python-packaging. Add python-imporlib-metadata, python-keyring, python-rfc3986, python-rich and python-urllib3. Reviewed-by: Steve George Change-Id: I55dbcd646dec60cfe8ec226aed0cf3f8c59e2eeb --- gnu/packages/python-xyz.scm | 34 +++++++++++++++++++++++----------- 1 file changed, 23 insertions(+), 11 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 503d8f510f..7b3a193856 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -25726,25 +25726,37 @@ (define-public python-pkginfo (define-public python-twine (package (name "python-twine") - (version "1.15.0") + (version "5.1.1") (source - (origin - (method url-fetch) - (uri (pypi-uri "twine" version)) - (sha256 - (base32 "11rpd653zcgzkq3sgwkzs3mpxl3r5rij59745ni84ikv8smjmlm3")))) - (build-system python-build-system) + (origin + (method url-fetch) + (uri (pypi-uri "twine" version)) + (sha256 + (base32 "1nr24gd5gm22b0jzb5qmw4swh8bshixmqm0kv4s38ay0758q584s")))) + (build-system pyproject-build-system) + (arguments + (list #:test-flags ;; Disable failing tests. + #~(list "-k" (string-append + "not test_pkginfo_returns_no_metadata" + " and not test_fails_rst_no_content")))) + (native-inputs + (list python-pretend + python-pytest + python-pytest-socket)) (propagated-inputs - (list python-tqdm - python-packaging + (list python-importlib-metadata + python-keyring python-pkginfo python-readme-renderer python-requests - python-requests-toolbelt)) + python-requests-toolbelt + python-rfc3986 + python-rich + python-urllib3)) (home-page "https://github.com/pypa/twine") (synopsis "Collection of utilities for interacting with PyPI") (description - "@code{twine} currently supports registering projects and uploading + "@code{twine} currently supports registering projects and uploading distributions. It authenticates the user over HTTPS, allows them to pre-sign their files and supports any packaging format (including wheels).") (license license:asl2.0))) -- 2.46.0 From debbugs-submit-bounces@debbugs.gnu.org Wed Sep 25 10:25:17 2024 Received: (at 73070) by debbugs.gnu.org; 25 Sep 2024 14:25:18 +0000 Received: from localhost ([127.0.0.1]:40144 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1stSxA-0006VE-81 for submit@debbugs.gnu.org; Wed, 25 Sep 2024 10:25:17 -0400 Received: from eggs.gnu.org ([209.51.188.92]:60360) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1stSp2-0005v4-E1 for 73070@debbugs.gnu.org; Wed, 25 Sep 2024 10:16:53 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1stSoT-0001pa-IA; Wed, 25 Sep 2024 10:16:17 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:Date:References:In-Reply-To:Subject:To: From; bh=E8cub9bYoSpz9Rs315Y/2QcrSPxmwAiaoVIdcwEVzg4=; b=C2B9DSfTwowuC3kZGwoH R/JxK6vG4R9HFHNI36GglWuTmSambXjbeMVVHOxx9+irJRwt/uEavbWsDEg3IQhIqqs2jAYrr3j0i k0lkJdHJiI0pN5UiOona57jGwuaTQoXAl9c9H4hpKenTcX9HNU7V1TOVSWaITCDdCZCnlrzYAi+Gk s/nM0M3OsXVJuaVlJ3o2Me0qHFqUiDrPzjmaWCI738MIDjaz4KTaDkLMCj04BD1MyXVq+5xgLHRm5 TtaezYZvbdN8gjNGlXEihbKBd/v0x95L/7YdYzY5pVWjV+AQEstLvbDaO2WvPtxEW5WG83WS2/xuP UveRZCyjhlFFzw==; From: =?utf-8?Q?Ludovic_Court=C3=A8s?= To: 73070@debbugs.gnu.org, lars@6xq.net, marius@gnu.org, me@bonfacemunyoki.com, sharlatanus@gmail.com, tanguy@bioneland.org, jgart@dismail.de Subject: Re: [bug#73070] [PATCH v2 0/4] Series updating python-twine & python-altair In-Reply-To: (Steve George's message of "Sat, 21 Sep 2024 23:47:56 +0100") References: <20240906142232.18550-1-ngraves@ngraves.fr> Date: Wed, 25 Sep 2024 16:16:11 +0200 Message-ID: <87bk0bu8d0.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 73070 Cc: Steve George X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Hello, Steve George skribis: > Revision and review of original series sent by Nicolas Graves. Dear Python team, could you take a look? https://issues.guix.gnu.org/73070 There are 100 dependents and it seems qa.guix hasn=E2=80=99t built them yet. Ludo=E2=80=99. From debbugs-submit-bounces@debbugs.gnu.org Wed Sep 25 13:07:46 2024 Received: (at 73070) by debbugs.gnu.org; 25 Sep 2024 17:07:46 +0000 Received: from localhost ([127.0.0.1]:46650 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1stVUQ-0000fE-Ed for submit@debbugs.gnu.org; Wed, 25 Sep 2024 13:07:46 -0400 Received: from mx1.dismail.de ([78.46.223.134]:34017) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1stVUN-0000ew-1s for 73070@debbugs.gnu.org; Wed, 25 Sep 2024 13:07:44 -0400 Received: from mx1.dismail.de (localhost [127.0.0.1]) by mx1.dismail.de (OpenSMTPD) with ESMTP id 605470a9; Wed, 25 Sep 2024 19:07:10 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed; d=dismail.de; h= mime-version:date:content-type:from:message-id:subject:to:cc :in-reply-to:references; s=20190914; bh=InlMzGrqCGfOmDrOkEq4znE4 wbm7EaANiIDKOk+PPL0=; b=uF7eyR343xA470XoZ+bdgfY1U3N6UCUVFZug8PS9 G+dMkZGrAijugzYDDimMj5E3Gr28lqaOWhv2YZk8CN8LG6BIEQ9IcX+JfYBkk2e2 oag5XNJlFxdmSvCNBEb0ubnJNOhwm80fcEq+pbG7KuI5hs7iWNBCcDf4VBl3+oCq Sz2XVdzddX0dl3Dlp2DwhclqqUqgRWtihtRWNb7zkeSNZXIYgNs6d0hwHr/3gslh s2eeA/wTjZnlnaaxGMVRkP2ijZdK8ior8ASzJLk16c4VK0CfceFmEtSa7LqxSvum YrCbp3/xOdyraqGsCrbnuogwMnodHriCsg5gSSfAHmrY/Q== Received: from smtp1.dismail.de ( [10.240.26.11]) by mx1.dismail.de (OpenSMTPD) with ESMTP id 92ae6854; Wed, 25 Sep 2024 19:07:09 +0200 (CEST) Received: from smtp1.dismail.de (localhost [127.0.0.1]) by smtp1.dismail.de (OpenSMTPD) with ESMTP id 8f8c04a6; Wed, 25 Sep 2024 19:07:09 +0200 (CEST) Received: by dismail.de (OpenSMTPD) with ESMTPSA id 323539ef (TLSv1.3:TLS_AES_256_GCM_SHA384:256:NO); Wed, 25 Sep 2024 19:07:09 +0200 (CEST) MIME-Version: 1.0 Date: Wed, 25 Sep 2024 17:07:08 +0000 Content-Type: multipart/alternative; boundary="57521991-4561-47dd-a97e-78e7b56d29d0-1" From: "jgart" Message-ID: <70320ee3d4c0f3291f1ddba7307928711f203f2c@dismail.de> TLS-Required: No Subject: Re: [bug#73070] [PATCH v2 0/4] Series updating python-twine & python-altair To: "=?utf-8?B?THVkb3ZpYyBDb3VydMOocw==?=" , 73070@debbugs.gnu.org, lars@6xq.net, marius@gnu.org, me@bonfacemunyoki.com, sharlatanus@gmail.com, tanguy@bioneland.org In-Reply-To: <87bk0bu8d0.fsf@gnu.org> References: <20240906142232.18550-1-ngraves@ngraves.fr> <87bk0bu8d0.fsf@gnu.org> X-Spam-Score: -0.7 (/) X-Debbugs-Envelope-To: 73070 Cc: Steve George X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.7 (-) --57521991-4561-47dd-a97e-78e7b56d29d0-1 Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: quoted-printable >=20 >=20There are 100 dependents and it seems qa.guix hasn=E2=80=99t built th= em yet. >=20 I=20can't build all this on my old thinkpad efficiently. Can someone else= in the Python team take a look? Thanks in advance. all the best, Jorge --57521991-4561-47dd-a97e-78e7b56d29d0-1 Content-Type: text/html; charset="utf-8" Content-Transfer-Encoding: quoted-printable
There are 100 depende= nts and it seems qa.guix hasn=E2=80=99t built them yet.
<= div>
I can't build all this on my old thinkpad efficiently.= Can someone else in the Python team take a look? Thanks in advance.
<= /div>

all the best,

Jorge=
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[86.8.111.200]) by smtp.gmail.com with ESMTPSA id a640c23a62f3a-a93930cace4sm275972166b.117.2024.09.25.16.03.12 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 25 Sep 2024 16:03:13 -0700 (PDT) From: Sharlatan Hellseher To: 73070@debbugs.gnu.org Subject: [PATCH 0/3] Fix python development environment Date: Thu, 26 Sep 2024 00:03:03 +0100 Message-ID: <87msjvnxp4.fsf@gmail.com> MIME-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" X-Spam-Score: 0.5 (/) X-Debbugs-Envelope-To: 73070 Cc: Nicolas Graves , Ludovic =?utf-8?Q?Court=C3=A8s?= , jgart , Steve George X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -0.5 (/) --=-=-= Content-Type: text/plain Hi! After 4h of building the chain it's finally finished with majority packages successfully finished Please see the stats: --8<---------------cut here---------------start------------->8--- > git log -4 --stat commit 36206d8c9bff95f76d1a03aa7469d52c71001ead (HEAD -> local/20240925180015-issue-73070) Author: Nicolas Graves via Guix-patches via Date: Sat Sep 21 23:47:59 2024 +0100 gnu: python-twine: Update to 5.1.1. * gnu/packages/python-xyz.scm (python-twine): Update to 5.1.1. [build-system]: Move to pyproject-build-system. [arguments]<#:test-flags>: Disable failing tests. [native-inputs]: Add python-pretend, python-pytest, python-pytest-socket. [propagated-inputs]: Remove python-tqdm, python-packaging. Add python-imporlib-metadata, python-keyring, python-rfc3986, python-rich and python-urllib3. Reviewed-by: Steve George Change-Id: I55dbcd646dec60cfe8ec226aed0cf3f8c59e2eeb Signed-off-by: Sharlatan Hellseher gnu/packages/python-xyz.scm | 34 +++++++++++++++++++++++----------- 1 file changed, 23 insertions(+), 11 deletions(-) commit 14c2654b2f9ea3adaa444d1a59be66724c974108 Author: Nicolas Graves via Guix-patches via Date: Sat Sep 21 23:48:00 2024 +0100 gnu: python-altair: Update to 5.3.0. * gnu/packages/statistics.scm (python-altair): Update to 5.3.0. [arguments]<#:test-flags>: Add failing tests, reorganize. Reviewed-by: Steve George Change-Id: I695e63e5395f40997ab59706240b8b059778b0ad Signed-off-by: Sharlatan Hellseher gnu/packages/statistics.scm | 29 +++++++++++++++++++++-------- 1 file changed, 21 insertions(+), 8 deletions(-) commit 135632965bd9367ab8a5501d0ea931b464632b92 Author: Nicolas Graves via Guix-patches via Date: Sat Sep 21 23:47:57 2024 +0100 gnu: python-pkginfo: Update to 1.10.0. * gnu/packages/python-xyz.scm (python-pkginfo): Update to 1.10.0. [native-inputs]: Add python-wheel. Reviewed-by: Steve George Change-Id: I682773a5a5c36c9a2ffd9ce8e96048c08a7a174e Signed-off-by: Sharlatan Hellseher gnu/packages/python-xyz.scm | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) commit 57502eea74cfd2c4909b3c60ef48887c52fcf9b6 Author: Ricardo Wurmus Date: Sat Sep 21 23:47:58 2024 +0100 gnu: python-readme-renderer: Update to 41.0. * gnu/packages/python-xyz.scm (python-readme-renderer): Update to 41.0. [build-system]: Use pyproject-build-system. [arguments]: Delete 'loosen-cmarkgfm-dependency phase; replace custom 'check phase with #:test-flags. [native-inputs]: Add python-wheel; remove python-mock. Reviewed-by: Steve George Change-Id: I47cef84089384d2cf760c166fed9147863d1a415 Signed-off-by: Sharlatan Hellseher gnu/packages/python-xyz.scm | 42 ++++++++++++++++++++---------------------- 1 file changed, 20 insertions(+), 22 deletions(-) > ./pre-inst-env guix describe Git checkout: repository: /mnt/library/code/guix/ branch: local/20240925180015-issue-73070 commit: 36206d8c9bff95f76d1a03aa7469d52c71001ead > ./pre-inst-env guix build python-twine python-altair python-pkginfo python-readme-renderer /gnu/store/2n0jzdl5g8y7i03s0lg1fjx96lvl4k4f-python-readme-renderer-41.0 /gnu/store/39abidxcpyhmyhkg8mjyjs2imw6wfjf6-python-pkginfo-1.10.0 /gnu/store/9qawasb7d7ci97r8a26nb7wbbn5wi1vl-python-altair-5.3.0 /gnu/store/s9nn4bx7bvakv5vgnsd47w0zqk2j8jfc-python-twine-5.1.1 > ./pre-inst-env guix refresh --list-dependent python-twine python-altair python-pkginfo python-readme-renderer Building the following 54 packages would ensure 109 dependent packages are rebuilt: vembrane@0.13.2 aerich@0.7.2 python-gguf@0.6.0 python-nanopb@0.4.6.4 r-torch@0.13.0 python-pytorch-avx@2.4.0 python-cellbender@0.2.2 llama-cpp@0.0.0-3.a5735e4 python-hicexplorer@3.7.4 python-funsor@0.4.5 python-pytorch-geometric@2.4.0 python-deepxde@1.12.1 python-scikit-opt@0.6.6 python-pgmpy@0.1.24 python-fastapi-pagination@0.12.0 python-fastapi-pagination-minimal@0.12.0 python-pynixutil@0.5.0 openconnect-sso@0.8.0 python-hyperkitty@1.3.5 postorius@1.3.6 python-pyahocorasick@2.1.0 python-metacells@0.9.4 mdpo@0.3.6 python-kanon@0.6.6 python-botorch@0.11.3 emacs-flycheck-cpplint@1.0.2 giara@1.0.1 python-scrapy@2.11.1 dialect@2.1.1 offlate@0.6.1 synapse@1.29.0 python-arpeggio@2.0.0 openfoam-com@2212 openfoam-org@10.20230119 python-viresclient@0.12.0 python-metpy@1.6.3 python-sunkit-image@0.5.1 python-radiospectra@0.6.0 python-sbpy@0.4.0 python-jwst-reffiles@1.0.1 python-glue-astronomy@0.10.0 python-naima@0.10.0 python-pymc@5.11.0 python-pyvista@0.42.3 python-cplot@0.9.3 python-quadpy@0.16.10 python-pygmsh@7.1.17 qmk-firmware-ergodox-ez-dvorak@0.22.3 qmk-firmware-ergodox-ez-default@0.22.3 qmk-firmware-ergodox-ez-dvorak-emacs@0.22.3 qmk-firmware-ergodox-ez-dvorak-42-key@0.22.3 qmk-firmware-ergodox-ez-dvorak-emacs-software@0.22.3 qmk-firmware-ergodox-ez-hacker-dvorak@0.22.3 python-transient@0.12 /gnu/store/knpkxhvmb706v27bg56fgyg9x7kjgw9v-python-transient-0.12 /gnu/store/l99h61mbgkzyy579pbw307rfqny9ipzf-qmk-firmware-ergodox-ez-dvorak-emacs-software-0.22.3 /gnu/store/rywlsd4cyyyy7szri2y1yz058bh64jc4-qmk-firmware-ergodox-ez-dvorak-0.22.3 /gnu/store/vh94n4lj5ws72diqkzvw46lzcfv36sw0-qmk-firmware-ergodox-ez-default-0.22.3 /gnu/store/5a9943909dad6pkdz2q3g896cwnhvbpc-qmk-firmware-ergodox-ez-dvorak-42-key-0.22.3 /gnu/store/nxf07rqr5wn7cbrx5nkjrw3m4727p6ng-qmk-firmware-ergodox-ez-hacker-dvorak-0.22.3 /gnu/store/xdrgjk02n70ys9askpmxc14rv4ihr780-qmk-firmware-ergodox-ez-dvorak-emacs-0.22.3 /gnu/store/wcfv8f0r7whzxam956j906qsy1vj5b7i-python-arpeggio-2.0.0 /gnu/store/snnz027isnfybfrh4zdzm9sp7sg2jl0y-synapse-1.29.0 /gnu/store/s2waczpfbrfmjch5b9lbp8wrrhjmxmy4-python-pygmsh-7.1.17 /gnu/store/wjj6cw4mm46qgx13n5lzw0nwdv20a9a5-python-cplot-0.9.3 /gnu/store/c55awr572wvxsyhqw8q383ip3b8h0242-python-quadpy-0.16.10 /gnu/store/fl81sqrw0l2b4b3kxrsslpq84k03wz6m-python-pyvista-0.42.3 /gnu/store/18nn5vb5s8ajfs2dh79pk4w0fw32pdin-python-pymc-5.11.0 /gnu/store/r4md232f6q92jjmn2cgldhld8wkw0aik-python-naima-0.10.0 /gnu/store/y1arrvvz35ykspg6xyprxhw4fhgqizjz-python-glue-astronomy-0.10.0 /gnu/store/jk7bixi9ddr1n3qizgyj858zq01mjm1d-python-jwst-reffiles-1.0.1 /gnu/store/b6a37cb8d07igz1cmrqzx4235b3fi4y5-python-sbpy-0.4.0 /gnu/store/zshayn378k8knx60afx04g9p8chhpb88-python-radiospectra-0.6.0 /gnu/store/rr7ccckqzzqq4m533qadr44102s9rrba-python-sunkit-image-0.5.1 /gnu/store/sij3pl7phihavm4dpr4r37n4alw9w5fd-python-metpy-1.6.3 /gnu/store/j8ars2dbkpkc0y0m4vwksw0w4fdmnip9-python-viresclient-0.12.0 /gnu/store/chx0b5qalb41mj4ai01xyfw44ffkcsr8-openfoam-org-10.20230119-debug /gnu/store/88dccpv5jaxgz8z1y48jv8y8rvywadp4-openfoam-org-10.20230119 /gnu/store/gggfk1dhll7l1c1fbn48ixx8fwl3gpr8-openfoam-com-2212-debug /gnu/store/vq1v01l2f00dgg0dp420vr31lxc51gf3-openfoam-com-2212 /gnu/store/9x3xjd1j9x3r236r0hpm22lqxj8gj3zy-offlate-0.6.1 /gnu/store/6476xwb698m8vm8bls6rmd7krrpc7m8a-dialect-2.1.1 /gnu/store/925zxy0z2l3dlmkc4vv4klkdllpfyrqs-emacs-flycheck-cpplint-1.0.2 /gnu/store/fbj3cng0530l4awfym5014sj9yzcya36-python-botorch-0.11.3 /gnu/store/sdswzyf0fbprqzf5acgqavfv43c9fv4h-python-kanon-0.6.6 /gnu/store/3633789m0yj2a4fp4pzf0ksmf48fmrhf-mdpo-0.3.6 /gnu/store/qmclw8kx1ijirlyy91whvzdrw9v55bd5-python-metacells-0.9.4 /gnu/store/99bbvhym157nifsggpj1kfm1ra3lb0n5-python-pyahocorasick-2.1.0 /gnu/store/9947q5rwfghqxn7mvxzrbyprwq6wa64m-postorius-1.3.6 /gnu/store/k7yj3kimj7w9nhz8d7zdbarpsa2f35q2-openconnect-sso-0.8.0 /gnu/store/2dcn4nmlbsbajvnifvcnqnc7g067l026-python-pynixutil-0.5.0 /gnu/store/afah8nnxq23mg95dhafylj404il0a5b8-python-fastapi-pagination-0.12.0 /gnu/store/1kbd60wqs10l2hnag1z27pfgza07hlh8-python-fastapi-pagination-minimal-0.12.0 /gnu/store/bz9ys44yp9nbd2j39fhlp8d0xmsbxbbx-python-pytorch-avx-2.4.0 /gnu/store/h52zbzb40c1md44balr2zigddzqfdz58-python-pgmpy-0.1.24 /gnu/store/si12bwzr7jnv1y69374fk1bwwamc986q-python-scikit-opt-0.6.6 /gnu/store/qcflylnk7sd5na822sna81x70amfl24j-python-deepxde-1.12.1 /gnu/store/frj7fph5lw8fxi0zjw1avsgn4vdwp0vm-llama-cpp-0.0.0-3.a5735e4 /gnu/store/byvm4iw498g3m3m44zjnrf9ds7qi5vyc-python-nanopb-0.4.6.4 /gnu/store/pjz97lig33dbn4yfxgpl09s9a89x6v6g-python-gguf-0.6.0 /gnu/store/rpzykn62lzz6q63mra76qh1q953k19a2-aerich-0.7.2 /gnu/store/imbwgd4id9a9825ls9cwsjyzylldcbxl-vembrane-0.13.2 Failed: - python-scrapy@2.11.1 - python-funsor@0.4.5 - python-hyperkitty@1.3.5 - python-pytorch-geometric@2.4.0 - python-hicexplorer@3.7.4 - giara@1.0.1 - r-torch@0.13.0 - python-cellbender@0.2.2 FAILED tests/test_downloadermiddleware_cookies.py::CookiesMiddlewareTest::test_user_set_cookie_domain_suffix_public_private = 25 failed, 2974 passed, 336 skipped, 13 deselected, 21 xfailed, 862 warnings in 396.85s (0:06:36) = error: in phase 'check': uncaught exception: %exception #<&invoke-error program: "/gnu/store/94v3qb2h2r03d1xwl6wmrln10xg6nwhm-python-pytest-7.1.3/bin/pytest" arguments: ("-vv" "-k" "not test_SCRAPY_CHECK_set and not test_check_all_default_contracts and not test_check_cb_kwargs_contract and not test_check_returns_items_contract and not test_check_returns_requests_contract and not test_check_scrapes_contract and not test_pformat and not test_pformat_old_windows and not test_pformat_windows") exit-status: 1 term-signal: #f stop-signal: #f> phase `check' failed after 398.7 seconds command "/gnu/store/94v3qb2h2r03d1xwl6wmrln10xg6nwhm-python-pytest-7.1.3/bin/pytest" "-vv" "-k" "not test_SCRAPY_CHECK_set and not test_check_all_default_contracts and not test_check_cb_kwargs_contract and not test_check_returns_items_contract and not test_check_returns_requests_contract and not test_check_scrapes_contract and not test_pformat and not test_pformat_old_windows and not test_pformat_windows" failed with status 1 build process 18 exited with status 256 builder for `/gnu/store/s3g9wqksch3887n5xxhyxi5mc6bp4ld0-python-scrapy-2.11.1.drv' failed with exit code 1 build of /gnu/store/s3g9wqksch3887n5xxhyxi5mc6bp4ld0-python-scrapy-2.11.1.drv failed View build log at '/var/log/guix/drvs/s3/g9wqksch3887n5xxhyxi5mc6bp4ld0-python-scrapy-2.11.1.drv.gz'. guix build: error: build of `/gnu/store/s3g9wqksch3887n5xxhyxi5mc6bp4ld0-python-scrapy-2.11.1.drv' failed ImportError: cannot import name 'escape_html' from 'mistune.scanner' (/gnu/store/9h0xwhs647kzyn49m9sq86qkx3f1xm80-python-mistune-next-2.0.4/lib/python3.10/site-packages/mistune/scanner.py) The above exception was the direct cause of the following exception: django.template.library.InvalidTemplateLibrary: Invalid template library specified. ImportError raised when trying to load 'hyperkitty.templatetags.decorate': cannot import name 'escape_html' from 'mistune.scanner' (/gnu/store/9h0xwhs647kzyn49m9sq86qkx3f1xm80-python-mistune-next-2.0.4/lib/python3.10/site-packages/mistune/scanner.py) error: in phase 'check': uncaught exception: %exception #<&invoke-error program: "example_project/manage.py" arguments: ("test" "--settings=hyperkitty.tests.settings_test" "--pythonpath=.") exit-status: 1 term-signal: #f stop-signal: #f> phase `check' failed after 2.2 seconds command "example_project/manage.py" "test" "--settings=hyperkitty.tests.settings_test" "--pythonpath=." failed with status 1 build process 18 exited with status 256 builder for `/gnu/store/fqsdzrrf12nlq5ls6dy6b5zhmc7fab4j-python-hyperkitty-1.3.5.drv' failed with exit code 1 build of /gnu/store/fqsdzrrf12nlq5ls6dy6b5zhmc7fab4j-python-hyperkitty-1.3.5.drv failed View build log at '/var/log/guix/drvs/fq/sdzrrf12nlq5ls6dy6b5zhmc7fab4j-python-hyperkitty-1.3.5.drv.gz'. guix build: error: build of `/gnu/store/fqsdzrrf12nlq5ls6dy6b5zhmc7fab4j-python-hyperkitty-1.3.5.drv' failed XFAIL Tests/test_image_resample.py::TestCoreResampleAlphaCorrect::test_levels_rgba Current implementation isn't precise enough XFAIL Tests/test_image_resample.py::TestCoreResampleAlphaCorrect::test_levels_la Current implementation isn't precise enough XPASS Tests/test_file_palm.py::test_p_mode Palm P image is wrong FAILED Tests/test_file_png.py::TestFilePng::test_sanity - AssertionError: ass... = 1 failed, 2981 passed, 81 skipped, 2 xfailed, 1 xpassed, 5 warnings in 28.97s = error: in phase 'check': uncaught exception: %exception #<&invoke-error program: "python" arguments: ("-m" "pytest" "-vv") exit-status: 1 term-signal: #f stop-signal: #f> phase `check' failed after 29.4 seconds command "python" "-m" "pytest" "-vv" failed with status 1 build process 18 exited with status 256 builder for `/gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv' failed with exit code 1 build of /gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv failed View build log at '/var/log/guix/drvs/9h/sgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv.gz'. cannot build derivation `/gnu/store/vdd7j9kczmqh0gigam9294zn7w7gq6jq-python-cleanlab-2.6.3.drv': 1 dependencies couldn't be built cannot build derivation `/gnu/store/hj3ahss8p9ml8x6wlqsazp8z5vir1nqr-python-funsor-0.4.5.drv': 1 dependencies couldn't be built guix build: error: build of `/gnu/store/hj3ahss8p9ml8x6wlqsazp8z5vir1nqr-python-funsor-0.4.5.drv' failed XPASS Tests/test_file_palm.py::test_p_mode Palm P image is wrong FAILED Tests/test_file_png.py::TestFilePng::test_sanity - AssertionError: ass... = 1 failed, 2981 passed, 81 skipped, 2 xfailed, 1 xpassed, 5 warnings in 28.54s = error: in phase 'check': uncaught exception: %exception #<&invoke-error program: "python" arguments: ("-m" "pytest" "-vv") exit-status: 1 term-signal: #f stop-signal: #f> phase `check' failed after 28.9 seconds command "python" "-m" "pytest" "-vv" failed with status 1 build process 18 exited with status 256 builder for `/gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv' failed with exit code 1 build of /gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv failed View build log at '/var/log/guix/drvs/9h/sgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv.gz'. cannot build derivation `/gnu/store/vdd7j9kczmqh0gigam9294zn7w7gq6jq-python-cleanlab-2.6.3.drv': 1 dependencies couldn't be built building /gnu/store/kwjdijyqn2v3w2idbln9gkk10lm9r2wc-python-praw-7.6.1.drv... cannot build derivation `/gnu/store/sv8nnhla30v758iwksd680gwn3rg8705-python-pytorch-geometric-2.4.0.drv': 1 dependencies couldn't be built guix build: error: build of `/gnu/store/sv8nnhla30v758iwksd680gwn3rg8705-python-pytorch-geometric-2.4.0.drv' failed FAILED Tests/test_file_png.py::TestFilePng::test_sanity - AssertionError: ass... = 1 failed, 2981 passed, 81 skipped, 2 xfailed, 1 xpassed, 5 warnings in 28.67s = error: in phase 'check': uncaught exception: %exception #<&invoke-error program: "python" arguments: ("-m" "pytest" "-vv") exit-status: 1 term-signal: #f stop-signal: #f> phase `check' failed after 29.0 seconds command "python" "-m" "pytest" "-vv" failed with status 1 build process 18 exited with status 256 builder for `/gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv' failed with exit code 1 build of /gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv failed View build log at '/var/log/guix/drvs/9h/sgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv.gz'. cannot build derivation `/gnu/store/vdd7j9kczmqh0gigam9294zn7w7gq6jq-python-cleanlab-2.6.3.drv': 1 dependencies couldn't be built building /gnu/store/kwjdijyqn2v3w2idbln9gkk10lm9r2wc-python-praw-7.6.1.drv... cannot build derivation `/gnu/store/mf8mbh9s4ks835805qp13v9cjh6w1jbk-python-hicexplorer-3.7.4.drv': 1 dependencies couldn't be built guix build: error: build of `/gnu/store/mf8mbh9s4ks835805qp13v9cjh6w1jbk-python-hicexplorer-3.7.4.drv' failed Full log written to /tmp/guix-build-giara-1.0.1.drv-0/build/meson-logs/testlog.txt error: in phase 'check': uncaught exception: %exception #<&invoke-error program: "meson" arguments: ("test" "--print-errorlogs" "-t" "0") exit-status: 1 term-signal: #f stop-signal: #f> phase `check' failed after 0.2 seconds command "meson" "test" "--print-errorlogs" "-t" "0" failed with status 1 build process 18 exited with status 256 builder for `/gnu/store/8rss4nxhfjcrhpm6rbdsa2q5zccls0lr-giara-1.0.1.drv' failed with exit code 1 build of /gnu/store/8rss4nxhfjcrhpm6rbdsa2q5zccls0lr-giara-1.0.1.drv failed View build log at '/var/log/guix/drvs/8r/ss4nxhfjcrhpm6rbdsa2q5zccls0lr-giara-1.0.1.drv.gz'. guix build: error: build of `/gnu/store/8rss4nxhfjcrhpm6rbdsa2q5zccls0lr-giara-1.0.1.drv' failed [175/1730] Building CXX object caffe2/CMakeFiles/vec_test_all_types_DEFAULT.dir/__/aten/src/ATen/test/vec_test_all_types.cpp.o ninja: build stopped: subcommand failed. cmake --build . --target install --config Release -- -j 16 error: in phase 'build': uncaught exception: %exception #<&invoke-error program: "python" arguments: ("-c" "import setuptools, tokenize;__file__='setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\\r\\n', '\\n');f.close();exec(compile(code, __file__, 'exec'))" "build") exit-status: 1 term-signal: #f stop-signal: #f> phase `build' failed after 98.6 seconds command "python" "-c" "import setuptools, tokenize;__file__='setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\\r\\n', '\\n');f.close();exec(compile(code, __file__, 'exec'))" "build" failed with status 1 build process 18 exited with status 256 builder for `/gnu/store/djljl1y3vznc4iqwjqgfxvyzfajijgx8-python-pytorch-2.0.1.drv' failed with exit code 1 build of /gnu/store/djljl1y3vznc4iqwjqgfxvyzfajijgx8-python-pytorch-2.0.1.drv failed View build log at '/var/log/guix/drvs/dj/ljl1y3vznc4iqwjqgfxvyzfajijgx8-python-pytorch-2.0.1.drv.gz'. building /gnu/store/pm7wagzrxkm5cqv6pfzxklirlw9g5h5p-python-sphobjinv-2.0.1.drv... cannot build derivation `/gnu/store/czp80g0kld1kh0c1slrzhih4iilwxmy2-r-torch-0.13.0.drv': 1 dependencies couldn't be built guix build: error: build of `/gnu/store/czp80g0kld1kh0c1slrzhih4iilwxmy2-r-torch-0.13.0.drv' failed error: in phase 'sanity-check': uncaught exception: %exception #<&invoke-error program: "python" arguments: ("/gnu/store/iqsjkp55pcx5bfcp2jm9yj5rlx9a0whd-sanity-check.py" "/gnu/store/r5f432953qhamyq4ap9cwk9dz70413rd-python-sphobjinv-2.0.1/lib/python3.10/site-packages") exit-status: 1 term-signal: #f stop-signal: #f> phase `sanity-check' failed after 0.2 seconds command "python" "/gnu/store/iqsjkp55pcx5bfcp2jm9yj5rlx9a0whd-sanity-check.py" "/gnu/store/r5f432953qhamyq4ap9cwk9dz70413rd-python-sphobjinv-2.0.1/lib/python3.10/site-packages" failed with status 1 build process 18 exited with status 256 builder for `/gnu/store/pm7wagzrxkm5cqv6pfzxklirlw9g5h5p-python-sphobjinv-2.0.1.drv' failed with exit code 1 build of /gnu/store/pm7wagzrxkm5cqv6pfzxklirlw9g5h5p-python-sphobjinv-2.0.1.drv failed View build log at '/var/log/guix/drvs/pm/7wagzrxkm5cqv6pfzxklirlw9g5h5p-python-sphobjinv-2.0.1.drv.gz'. cannot build derivation `/gnu/store/w6r8nnfv2jvgpy5sd1hykmpyw8w84v28-python-sphinx-autodoc-typehints-1.18.3.drv': 1 dependencies couldn't be built building /gnu/store/qh0wprkykp4rxyqwpd8kngyd1sg2d0yp-python-stpipe-0.7.0.drv... cannot build derivation `/gnu/store/bwxzrp3m4b2r46sjk7jbhx8x7ka6j1sm-python-cellbender-0.2.2.drv': 1 dependencies couldn't be built guix build: error: build of `/gnu/store/bwxzrp3m4b2r46sjk7jbhx8x7ka6j1sm-python-cellbender-0.2.2.drv' failed --8<---------------cut here---------------end--------------->8--- --=-=-= 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2024 06:57:55 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-100R00380848b6d-1f29-490b-a319-a83b73ee7641, F3497EA57BFAF455E9B2B7BFF8E68EC8FD7A9CC5) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 80.215.102.97 From: Nicolas Graves To: Sharlatan Hellseher , 73070@debbugs.gnu.org Subject: Re: [bug#73070] [PATCH 0/3] Fix python development environment In-Reply-To: <87msjvnxp4.fsf@gmail.com> References: <20240906142232.18550-1-ngraves@ngraves.fr> <87msjvnxp4.fsf@gmail.com> Date: Thu, 26 Sep 2024 08:57:54 +0200 Message-ID: <87ikui52bx.fsf@ngraves.fr> MIME-Version: 1.0 Content-Type: text/plain X-Ovh-Tracer-Id: 428967865098887835 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: -100 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgeeftddrvddtiedgudduhecutefuodetggdotefrodftvfcurfhrohhfihhlvgemucfqggfjpdevjffgvefmvefgnecuuegrihhlohhuthemucehtddtnecusecvtfgvtghiphhivghnthhsucdlqddutddtmdenucfjughrpefhvfevufgjfhffkfggtgesthdtredttddttdenucfhrhhomheppfhitgholhgrshcuifhrrghvvghsuceonhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrqeenucggtffrrghtthgvrhhnpeehuedvhfdugeevjedvteetgefgtedufffgvdeggeejhfdtgeeuffekueeugfegteenucffohhmrghinhepihhqshhjkhhpheehphgtgiehsghftghpvdhjmhelhihjhehrlhiglegrtdifhhguqdhsrghnihhthidqtghhvggtkhdrphihnecukfhppeduvdejrddtrddtrddupdektddrvdduhedruddtvddrleejpdefjedrheelrddugedvrddutddtnecuvehluhhsthgvrhfuihiivgeptdenucfrrghrrghmpehinhgvthepuddvjedrtddrtddruddpmhgrihhlfhhrohhmpehnghhrrghvvghssehnghhrrghvvghsrdhfrhdpnhgspghrtghpthhtohepuddprhgtphhtthhopeejfedtjedtseguvggssghughhsrdhgnhhurdhorhhgpdfovfetjfhoshhtpehmohehkedupdhmohguvgepshhmthhpohhuth DKIM-Signature: a=rsa-sha256; bh=WQ53uf3cDNNuOCxUKyYkbYO4t67DhoEPqq4VdWz3IlE=; c=relaxed/relaxed; d=ngraves.fr; h=From; s=ovhmo4487190-selector1; t=1727333877; v=1; b=luyfdMhXBrGR0aOTUTCuA+qLHT02KeeQ2/4pkGeX6AibtDr4YlcGodjLwt/rKLmm81ZLHJf8 jX7ukyvTLMMNoGl66hRDBSi8N6m4ei057C+cUIbG8qDztK6f68aJbsQTj+KDrpJpI7ZxPyPeFPk YQAQ1ZhBJ+08i+vmZqidBl57vcNrAJsSDAYzSw5ByV8JAZ3FFrYuGDmpUnUqDfHFa28I6g3QTXy 20Pqo6uRuBLEhwfLRyrmY+a1g7H397jdrgg0tqGrIqnv0Q7k6So7ZURClusoHqAEdCYcPdRxfJB j3cRCScJfMyqhigzkN6YEKhcdaW+wHfw50V+zvtMt8gpg== X-Spam-Score: 0.5 (/) X-Debbugs-Envelope-To: 73070 Cc: Ludovic =?utf-8?Q?Court=C3=A8s?= , jgart , Steve George X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -0.5 (/) On 2024-09-26 00:03, Sharlatan Hellseher wrote: > Hi! > > After 4h of building the chain it's finally finished with majority > packages successfully finished > > Please see the stats: Hi Sharlatan, thanks ! Also big thanks Steve, indeed I lost one commit. python-altair is not a part of "python dev environment", this is a mistake where I replaced a patch by another one. Is that review finished / confirmed, or do you still expect trying to fix the failures? Is it unlikely that they are related to the updates or these packages. > > --8<---------------cut here---------------start------------->8--- >> git log -4 --stat > commit 36206d8c9bff95f76d1a03aa7469d52c71001ead (HEAD -> local/20240925180015-issue-73070) > Author: Nicolas Graves via Guix-patches via > Date: Sat Sep 21 23:47:59 2024 +0100 > > gnu: python-twine: Update to 5.1.1. > > * gnu/packages/python-xyz.scm (python-twine): Update to 5.1.1. > [build-system]: Move to pyproject-build-system. > [arguments]<#:test-flags>: Disable failing tests. > [native-inputs]: Add python-pretend, python-pytest, python-pytest-socket. > [propagated-inputs]: Remove python-tqdm, python-packaging. Add > python-imporlib-metadata, python-keyring, python-rfc3986, > python-rich and python-urllib3. > > Reviewed-by: Steve George > Change-Id: I55dbcd646dec60cfe8ec226aed0cf3f8c59e2eeb > Signed-off-by: Sharlatan Hellseher > > gnu/packages/python-xyz.scm | 34 +++++++++++++++++++++++----------- > 1 file changed, 23 insertions(+), 11 deletions(-) > > commit 14c2654b2f9ea3adaa444d1a59be66724c974108 > Author: Nicolas Graves via Guix-patches via > Date: Sat Sep 21 23:48:00 2024 +0100 > > gnu: python-altair: Update to 5.3.0. > > * gnu/packages/statistics.scm (python-altair): Update to 5.3.0. > [arguments]<#:test-flags>: Add failing tests, reorganize. > > Reviewed-by: Steve George > Change-Id: I695e63e5395f40997ab59706240b8b059778b0ad > Signed-off-by: Sharlatan Hellseher > > gnu/packages/statistics.scm | 29 +++++++++++++++++++++-------- > 1 file changed, 21 insertions(+), 8 deletions(-) > > commit 135632965bd9367ab8a5501d0ea931b464632b92 > Author: Nicolas Graves via Guix-patches via > Date: Sat Sep 21 23:47:57 2024 +0100 > > gnu: python-pkginfo: Update to 1.10.0. > > * gnu/packages/python-xyz.scm (python-pkginfo): Update to 1.10.0. > [native-inputs]: Add python-wheel. > > Reviewed-by: Steve George > Change-Id: I682773a5a5c36c9a2ffd9ce8e96048c08a7a174e > Signed-off-by: Sharlatan Hellseher > > gnu/packages/python-xyz.scm | 7 ++++--- > 1 file changed, 4 insertions(+), 3 deletions(-) > > commit 57502eea74cfd2c4909b3c60ef48887c52fcf9b6 > Author: Ricardo Wurmus > Date: Sat Sep 21 23:47:58 2024 +0100 > > gnu: python-readme-renderer: Update to 41.0. > > * gnu/packages/python-xyz.scm (python-readme-renderer): Update to 41.0. > [build-system]: Use pyproject-build-system. > [arguments]: Delete 'loosen-cmarkgfm-dependency phase; replace custom 'check > phase with #:test-flags. > [native-inputs]: Add python-wheel; remove python-mock. > > Reviewed-by: Steve George > Change-Id: I47cef84089384d2cf760c166fed9147863d1a415 > Signed-off-by: Sharlatan Hellseher > > gnu/packages/python-xyz.scm | 42 ++++++++++++++++++++---------------------- > 1 file changed, 20 insertions(+), 22 deletions(-) > >> ./pre-inst-env guix describe > Git checkout: > repository: /mnt/library/code/guix/ > branch: local/20240925180015-issue-73070 > commit: 36206d8c9bff95f76d1a03aa7469d52c71001ead > >> ./pre-inst-env guix build python-twine python-altair python-pkginfo python-readme-renderer > /gnu/store/2n0jzdl5g8y7i03s0lg1fjx96lvl4k4f-python-readme-renderer-41.0 > /gnu/store/39abidxcpyhmyhkg8mjyjs2imw6wfjf6-python-pkginfo-1.10.0 > /gnu/store/9qawasb7d7ci97r8a26nb7wbbn5wi1vl-python-altair-5.3.0 > /gnu/store/s9nn4bx7bvakv5vgnsd47w0zqk2j8jfc-python-twine-5.1.1 > >> ./pre-inst-env guix refresh --list-dependent python-twine python-altair > python-pkginfo python-readme-renderer Building the following 54 packages would > ensure 109 dependent packages are rebuilt: vembrane@0.13.2 aerich@0.7.2 > python-gguf@0.6.0 python-nanopb@0.4.6.4 r-torch@0.13.0 python-pytorch-avx@2.4.0 > python-cellbender@0.2.2 llama-cpp@0.0.0-3.a5735e4 python-hicexplorer@3.7.4 > python-funsor@0.4.5 python-pytorch-geometric@2.4.0 python-deepxde@1.12.1 > python-scikit-opt@0.6.6 python-pgmpy@0.1.24 python-fastapi-pagination@0.12.0 > python-fastapi-pagination-minimal@0.12.0 python-pynixutil@0.5.0 > openconnect-sso@0.8.0 python-hyperkitty@1.3.5 postorius@1.3.6 > python-pyahocorasick@2.1.0 python-metacells@0.9.4 mdpo@0.3.6 python-kanon@0.6.6 > python-botorch@0.11.3 emacs-flycheck-cpplint@1.0.2 giara@1.0.1 > python-scrapy@2.11.1 dialect@2.1.1 offlate@0.6.1 synapse@1.29.0 > python-arpeggio@2.0.0 openfoam-com@2212 openfoam-org@10.20230119 > python-viresclient@0.12.0 python-metpy@1.6.3 python-sunkit-image@0.5.1 > python-radiospectra@0.6.0 python-sbpy@0.4.0 python-jwst-reffiles@1.0.1 > python-glue-astronomy@0.10.0 python-naima@0.10.0 python-pymc@5.11.0 > python-pyvista@0.42.3 python-cplot@0.9.3 python-quadpy@0.16.10 > python-pygmsh@7.1.17 qmk-firmware-ergodox-ez-dvorak@0.22.3 > qmk-firmware-ergodox-ez-default@0.22.3 > qmk-firmware-ergodox-ez-dvorak-emacs@0.22.3 > qmk-firmware-ergodox-ez-dvorak-42-key@0.22.3 > qmk-firmware-ergodox-ez-dvorak-emacs-software@0.22.3 > qmk-firmware-ergodox-ez-hacker-dvorak@0.22.3 python-transient@0.12 > > /gnu/store/knpkxhvmb706v27bg56fgyg9x7kjgw9v-python-transient-0.12 > /gnu/store/l99h61mbgkzyy579pbw307rfqny9ipzf-qmk-firmware-ergodox-ez-dvorak-emacs-software-0.22.3 > /gnu/store/rywlsd4cyyyy7szri2y1yz058bh64jc4-qmk-firmware-ergodox-ez-dvorak-0.22.3 > /gnu/store/vh94n4lj5ws72diqkzvw46lzcfv36sw0-qmk-firmware-ergodox-ez-default-0.22.3 > /gnu/store/5a9943909dad6pkdz2q3g896cwnhvbpc-qmk-firmware-ergodox-ez-dvorak-42-key-0.22.3 > /gnu/store/nxf07rqr5wn7cbrx5nkjrw3m4727p6ng-qmk-firmware-ergodox-ez-hacker-dvorak-0.22.3 > /gnu/store/xdrgjk02n70ys9askpmxc14rv4ihr780-qmk-firmware-ergodox-ez-dvorak-emacs-0.22.3 > /gnu/store/wcfv8f0r7whzxam956j906qsy1vj5b7i-python-arpeggio-2.0.0 > /gnu/store/snnz027isnfybfrh4zdzm9sp7sg2jl0y-synapse-1.29.0 > /gnu/store/s2waczpfbrfmjch5b9lbp8wrrhjmxmy4-python-pygmsh-7.1.17 > /gnu/store/wjj6cw4mm46qgx13n5lzw0nwdv20a9a5-python-cplot-0.9.3 > /gnu/store/c55awr572wvxsyhqw8q383ip3b8h0242-python-quadpy-0.16.10 > /gnu/store/fl81sqrw0l2b4b3kxrsslpq84k03wz6m-python-pyvista-0.42.3 > /gnu/store/18nn5vb5s8ajfs2dh79pk4w0fw32pdin-python-pymc-5.11.0 > /gnu/store/r4md232f6q92jjmn2cgldhld8wkw0aik-python-naima-0.10.0 > /gnu/store/y1arrvvz35ykspg6xyprxhw4fhgqizjz-python-glue-astronomy-0.10.0 > /gnu/store/jk7bixi9ddr1n3qizgyj858zq01mjm1d-python-jwst-reffiles-1.0.1 > /gnu/store/b6a37cb8d07igz1cmrqzx4235b3fi4y5-python-sbpy-0.4.0 > /gnu/store/zshayn378k8knx60afx04g9p8chhpb88-python-radiospectra-0.6.0 > /gnu/store/rr7ccckqzzqq4m533qadr44102s9rrba-python-sunkit-image-0.5.1 > /gnu/store/sij3pl7phihavm4dpr4r37n4alw9w5fd-python-metpy-1.6.3 > /gnu/store/j8ars2dbkpkc0y0m4vwksw0w4fdmnip9-python-viresclient-0.12.0 > /gnu/store/chx0b5qalb41mj4ai01xyfw44ffkcsr8-openfoam-org-10.20230119-debug > /gnu/store/88dccpv5jaxgz8z1y48jv8y8rvywadp4-openfoam-org-10.20230119 > /gnu/store/gggfk1dhll7l1c1fbn48ixx8fwl3gpr8-openfoam-com-2212-debug > /gnu/store/vq1v01l2f00dgg0dp420vr31lxc51gf3-openfoam-com-2212 > /gnu/store/9x3xjd1j9x3r236r0hpm22lqxj8gj3zy-offlate-0.6.1 > /gnu/store/6476xwb698m8vm8bls6rmd7krrpc7m8a-dialect-2.1.1 > /gnu/store/925zxy0z2l3dlmkc4vv4klkdllpfyrqs-emacs-flycheck-cpplint-1.0.2 > /gnu/store/fbj3cng0530l4awfym5014sj9yzcya36-python-botorch-0.11.3 > /gnu/store/sdswzyf0fbprqzf5acgqavfv43c9fv4h-python-kanon-0.6.6 > /gnu/store/3633789m0yj2a4fp4pzf0ksmf48fmrhf-mdpo-0.3.6 > /gnu/store/qmclw8kx1ijirlyy91whvzdrw9v55bd5-python-metacells-0.9.4 > /gnu/store/99bbvhym157nifsggpj1kfm1ra3lb0n5-python-pyahocorasick-2.1.0 > /gnu/store/9947q5rwfghqxn7mvxzrbyprwq6wa64m-postorius-1.3.6 > /gnu/store/k7yj3kimj7w9nhz8d7zdbarpsa2f35q2-openconnect-sso-0.8.0 > /gnu/store/2dcn4nmlbsbajvnifvcnqnc7g067l026-python-pynixutil-0.5.0 > /gnu/store/afah8nnxq23mg95dhafylj404il0a5b8-python-fastapi-pagination-0.12.0 > /gnu/store/1kbd60wqs10l2hnag1z27pfgza07hlh8-python-fastapi-pagination-minimal-0.12.0 > /gnu/store/bz9ys44yp9nbd2j39fhlp8d0xmsbxbbx-python-pytorch-avx-2.4.0 > /gnu/store/h52zbzb40c1md44balr2zigddzqfdz58-python-pgmpy-0.1.24 > /gnu/store/si12bwzr7jnv1y69374fk1bwwamc986q-python-scikit-opt-0.6.6 > /gnu/store/qcflylnk7sd5na822sna81x70amfl24j-python-deepxde-1.12.1 > /gnu/store/frj7fph5lw8fxi0zjw1avsgn4vdwp0vm-llama-cpp-0.0.0-3.a5735e4 > /gnu/store/byvm4iw498g3m3m44zjnrf9ds7qi5vyc-python-nanopb-0.4.6.4 > /gnu/store/pjz97lig33dbn4yfxgpl09s9a89x6v6g-python-gguf-0.6.0 > /gnu/store/rpzykn62lzz6q63mra76qh1q953k19a2-aerich-0.7.2 > /gnu/store/imbwgd4id9a9825ls9cwsjyzylldcbxl-vembrane-0.13.2 > > Failed: > > - python-scrapy@2.11.1 > - python-funsor@0.4.5 > - python-hyperkitty@1.3.5 > - python-pytorch-geometric@2.4.0 > - python-hicexplorer@3.7.4 > - giara@1.0.1 > - r-torch@0.13.0 > - python-cellbender@0.2.2 > > FAILED tests/test_downloadermiddleware_cookies.py::CookiesMiddlewareTest::test_user_set_cookie_domain_suffix_public_private > = 25 failed, 2974 passed, 336 skipped, 13 deselected, 21 xfailed, 862 warnings in 396.85s (0:06:36) = > error: in phase 'check': uncaught exception: > %exception #<&invoke-error program: "/gnu/store/94v3qb2h2r03d1xwl6wmrln10xg6nwhm-python-pytest-7.1.3/bin/pytest" arguments: ("-vv" "-k" "not test_SCRAPY_CHECK_set and not test_check_all_default_contracts and not test_check_cb_kwargs_contract and not test_check_returns_items_contract and not test_check_returns_requests_contract and not test_check_scrapes_contract and not test_pformat and not test_pformat_old_windows and not test_pformat_windows") exit-status: 1 term-signal: #f stop-signal: #f> > phase `check' failed after 398.7 seconds > command "/gnu/store/94v3qb2h2r03d1xwl6wmrln10xg6nwhm-python-pytest-7.1.3/bin/pytest" "-vv" "-k" "not test_SCRAPY_CHECK_set and not test_check_all_default_contracts and not test_check_cb_kwargs_contract and not test_check_returns_items_contract and not test_check_returns_requests_contract and not test_check_scrapes_contract and not test_pformat and not test_pformat_old_windows and not test_pformat_windows" failed with status 1 > build process 18 exited with status 256 > builder for `/gnu/store/s3g9wqksch3887n5xxhyxi5mc6bp4ld0-python-scrapy-2.11.1.drv' failed with exit code 1 > build of /gnu/store/s3g9wqksch3887n5xxhyxi5mc6bp4ld0-python-scrapy-2.11.1.drv failed > View build log at '/var/log/guix/drvs/s3/g9wqksch3887n5xxhyxi5mc6bp4ld0-python-scrapy-2.11.1.drv.gz'. > guix build: error: build of `/gnu/store/s3g9wqksch3887n5xxhyxi5mc6bp4ld0-python-scrapy-2.11.1.drv' failed > > ImportError: cannot import name 'escape_html' from 'mistune.scanner' (/gnu/store/9h0xwhs647kzyn49m9sq86qkx3f1xm80-python-mistune-next-2.0.4/lib/python3.10/site-packages/mistune/scanner.py) > > The above exception was the direct cause of the following exception: > > django.template.library.InvalidTemplateLibrary: Invalid template library specified. ImportError raised when trying to load 'hyperkitty.templatetags.decorate': cannot import name 'escape_html' from 'mistune.scanner' (/gnu/store/9h0xwhs647kzyn49m9sq86qkx3f1xm80-python-mistune-next-2.0.4/lib/python3.10/site-packages/mistune/scanner.py) > error: in phase 'check': uncaught exception: > %exception #<&invoke-error program: "example_project/manage.py" arguments: ("test" "--settings=hyperkitty.tests.settings_test" "--pythonpath=.") exit-status: 1 term-signal: #f stop-signal: #f> > phase `check' failed after 2.2 seconds > command "example_project/manage.py" "test" "--settings=hyperkitty.tests.settings_test" "--pythonpath=." failed with status 1 > build process 18 exited with status 256 > builder for `/gnu/store/fqsdzrrf12nlq5ls6dy6b5zhmc7fab4j-python-hyperkitty-1.3.5.drv' failed with exit code 1 > build of /gnu/store/fqsdzrrf12nlq5ls6dy6b5zhmc7fab4j-python-hyperkitty-1.3.5.drv failed > View build log at '/var/log/guix/drvs/fq/sdzrrf12nlq5ls6dy6b5zhmc7fab4j-python-hyperkitty-1.3.5.drv.gz'. > guix build: error: build of `/gnu/store/fqsdzrrf12nlq5ls6dy6b5zhmc7fab4j-python-hyperkitty-1.3.5.drv' failed > > XFAIL Tests/test_image_resample.py::TestCoreResampleAlphaCorrect::test_levels_rgba > Current implementation isn't precise enough > XFAIL Tests/test_image_resample.py::TestCoreResampleAlphaCorrect::test_levels_la > Current implementation isn't precise enough > XPASS Tests/test_file_palm.py::test_p_mode Palm P image is wrong > FAILED Tests/test_file_png.py::TestFilePng::test_sanity - AssertionError: ass... > = 1 failed, 2981 passed, 81 skipped, 2 xfailed, 1 xpassed, 5 warnings in 28.97s = > error: in phase 'check': uncaught exception: > %exception #<&invoke-error program: "python" arguments: ("-m" "pytest" "-vv") exit-status: 1 term-signal: #f stop-signal: #f> > phase `check' failed after 29.4 seconds > command "python" "-m" "pytest" "-vv" failed with status 1 > build process 18 exited with status 256 > builder for `/gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv' failed with exit code 1 > build of /gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv failed > View build log at '/var/log/guix/drvs/9h/sgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv.gz'. > cannot build derivation `/gnu/store/vdd7j9kczmqh0gigam9294zn7w7gq6jq-python-cleanlab-2.6.3.drv': 1 dependencies couldn't be built > cannot build derivation `/gnu/store/hj3ahss8p9ml8x6wlqsazp8z5vir1nqr-python-funsor-0.4.5.drv': 1 dependencies couldn't be built > guix build: error: build of `/gnu/store/hj3ahss8p9ml8x6wlqsazp8z5vir1nqr-python-funsor-0.4.5.drv' failed > > XPASS Tests/test_file_palm.py::test_p_mode Palm P image is wrong > FAILED Tests/test_file_png.py::TestFilePng::test_sanity - AssertionError: ass... > = 1 failed, 2981 passed, 81 skipped, 2 xfailed, 1 xpassed, 5 warnings in 28.54s = > error: in phase 'check': uncaught exception: > %exception #<&invoke-error program: "python" arguments: ("-m" "pytest" "-vv") exit-status: 1 term-signal: #f stop-signal: #f> > phase `check' failed after 28.9 seconds > command "python" "-m" "pytest" "-vv" failed with status 1 > build process 18 exited with status 256 > builder for `/gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv' failed with exit code 1 > build of /gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv failed > View build log at '/var/log/guix/drvs/9h/sgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv.gz'. > cannot build derivation `/gnu/store/vdd7j9kczmqh0gigam9294zn7w7gq6jq-python-cleanlab-2.6.3.drv': 1 dependencies couldn't be built > building /gnu/store/kwjdijyqn2v3w2idbln9gkk10lm9r2wc-python-praw-7.6.1.drv... > cannot build derivation `/gnu/store/sv8nnhla30v758iwksd680gwn3rg8705-python-pytorch-geometric-2.4.0.drv': 1 dependencies couldn't be built > guix build: error: build of `/gnu/store/sv8nnhla30v758iwksd680gwn3rg8705-python-pytorch-geometric-2.4.0.drv' failed > > FAILED Tests/test_file_png.py::TestFilePng::test_sanity - AssertionError: ass... > = 1 failed, 2981 passed, 81 skipped, 2 xfailed, 1 xpassed, 5 warnings in 28.67s = > error: in phase 'check': uncaught exception: > %exception #<&invoke-error program: "python" arguments: ("-m" "pytest" "-vv") exit-status: 1 term-signal: #f stop-signal: #f> > phase `check' failed after 29.0 seconds > command "python" "-m" "pytest" "-vv" failed with status 1 > build process 18 exited with status 256 > builder for `/gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv' failed with exit code 1 > build of /gnu/store/9hsgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv failed > View build log at '/var/log/guix/drvs/9h/sgcmgjh1h6cg7k62g7j3qwdk11cc37-python-pillow-simd-9.2.0.drv.gz'. > cannot build derivation `/gnu/store/vdd7j9kczmqh0gigam9294zn7w7gq6jq-python-cleanlab-2.6.3.drv': 1 dependencies couldn't be built > building /gnu/store/kwjdijyqn2v3w2idbln9gkk10lm9r2wc-python-praw-7.6.1.drv... > cannot build derivation `/gnu/store/mf8mbh9s4ks835805qp13v9cjh6w1jbk-python-hicexplorer-3.7.4.drv': 1 dependencies couldn't be built > guix build: error: build of `/gnu/store/mf8mbh9s4ks835805qp13v9cjh6w1jbk-python-hicexplorer-3.7.4.drv' failed > > Full log written to /tmp/guix-build-giara-1.0.1.drv-0/build/meson-logs/testlog.txt > error: in phase 'check': uncaught exception: > %exception #<&invoke-error program: "meson" arguments: ("test" "--print-errorlogs" "-t" "0") exit-status: 1 term-signal: #f stop-signal: #f> > phase `check' failed after 0.2 seconds > command "meson" "test" "--print-errorlogs" "-t" "0" failed with status 1 > build process 18 exited with status 256 > builder for `/gnu/store/8rss4nxhfjcrhpm6rbdsa2q5zccls0lr-giara-1.0.1.drv' failed with exit code 1 > build of /gnu/store/8rss4nxhfjcrhpm6rbdsa2q5zccls0lr-giara-1.0.1.drv failed > View build log at '/var/log/guix/drvs/8r/ss4nxhfjcrhpm6rbdsa2q5zccls0lr-giara-1.0.1.drv.gz'. > guix build: error: build of `/gnu/store/8rss4nxhfjcrhpm6rbdsa2q5zccls0lr-giara-1.0.1.drv' failed > > [175/1730] Building CXX object caffe2/CMakeFiles/vec_test_all_types_DEFAULT.dir/__/aten/src/ATen/test/vec_test_all_types.cpp.o > ninja: build stopped: subcommand failed. > > cmake --build . --target install --config Release -- -j 16 > error: in phase 'build': uncaught exception: > %exception #<&invoke-error program: "python" arguments: ("-c" "import setuptools, tokenize;__file__='setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\\r\\n', '\\n');f.close();exec(compile(code, __file__, 'exec'))" "build") exit-status: 1 term-signal: #f stop-signal: #f> > phase `build' failed after 98.6 seconds > command "python" "-c" "import setuptools, tokenize;__file__='setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\\r\\n', '\\n');f.close();exec(compile(code, __file__, 'exec'))" "build" failed with status 1 > build process 18 exited with status 256 > builder for `/gnu/store/djljl1y3vznc4iqwjqgfxvyzfajijgx8-python-pytorch-2.0.1.drv' failed with exit code 1 > build of /gnu/store/djljl1y3vznc4iqwjqgfxvyzfajijgx8-python-pytorch-2.0.1.drv failed > View build log at '/var/log/guix/drvs/dj/ljl1y3vznc4iqwjqgfxvyzfajijgx8-python-pytorch-2.0.1.drv.gz'. > building /gnu/store/pm7wagzrxkm5cqv6pfzxklirlw9g5h5p-python-sphobjinv-2.0.1.drv... > cannot build derivation `/gnu/store/czp80g0kld1kh0c1slrzhih4iilwxmy2-r-torch-0.13.0.drv': 1 dependencies couldn't be built > guix build: error: build of `/gnu/store/czp80g0kld1kh0c1slrzhih4iilwxmy2-r-torch-0.13.0.drv' failed > > error: in phase 'sanity-check': uncaught exception: > %exception #<&invoke-error program: "python" arguments: ("/gnu/store/iqsjkp55pcx5bfcp2jm9yj5rlx9a0whd-sanity-check.py" "/gnu/store/r5f432953qhamyq4ap9cwk9dz70413rd-python-sphobjinv-2.0.1/lib/python3.10/site-packages") exit-status: 1 term-signal: #f stop-signal: #f> > phase `sanity-check' failed after 0.2 seconds > command "python" "/gnu/store/iqsjkp55pcx5bfcp2jm9yj5rlx9a0whd-sanity-check.py" "/gnu/store/r5f432953qhamyq4ap9cwk9dz70413rd-python-sphobjinv-2.0.1/lib/python3.10/site-packages" failed with status 1 > build process 18 exited with status 256 > builder for `/gnu/store/pm7wagzrxkm5cqv6pfzxklirlw9g5h5p-python-sphobjinv-2.0.1.drv' failed with exit code 1 > build of /gnu/store/pm7wagzrxkm5cqv6pfzxklirlw9g5h5p-python-sphobjinv-2.0.1.drv failed > View build log at '/var/log/guix/drvs/pm/7wagzrxkm5cqv6pfzxklirlw9g5h5p-python-sphobjinv-2.0.1.drv.gz'. > cannot build derivation `/gnu/store/w6r8nnfv2jvgpy5sd1hykmpyw8w84v28-python-sphinx-autodoc-typehints-1.18.3.drv': 1 dependencies couldn't be built > building /gnu/store/qh0wprkykp4rxyqwpd8kngyd1sg2d0yp-python-stpipe-0.7.0.drv... > cannot build derivation `/gnu/store/bwxzrp3m4b2r46sjk7jbhx8x7ka6j1sm-python-cellbender-0.2.2.drv': 1 dependencies couldn't be built > guix build: error: build of `/gnu/store/bwxzrp3m4b2r46sjk7jbhx8x7ka6j1sm-python-cellbender-0.2.2.drv' failed > --8<---------------cut here---------------end--------------->8--- -- Best regards, Nicolas Graves From debbugs-submit-bounces@debbugs.gnu.org Thu Sep 26 03:31:17 2024 Received: (at 73070) by debbugs.gnu.org; 26 Sep 2024 07:31:17 +0000 Received: from localhost ([127.0.0.1]:49965 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1stiy5-0001F8-DG for submit@debbugs.gnu.org; Thu, 26 Sep 2024 03:31:17 -0400 Received: from mail-ej1-f42.google.com ([209.85.218.42]:51323) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1stiy3-0001Ee-H1 for 73070@debbugs.gnu.org; Thu, 26 Sep 2024 03:31:16 -0400 Received: by mail-ej1-f42.google.com with SMTP id a640c23a62f3a-a7a843bef98so77317666b.2 for <73070@debbugs.gnu.org>; Thu, 26 Sep 2024 00:30:48 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20230601; t=1727335783; x=1727940583; 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[86.8.111.200]) by smtp.gmail.com with ESMTPSA id a640c23a62f3a-a9393134917sm309388866b.203.2024.09.26.00.23.37 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Thu, 26 Sep 2024 00:23:38 -0700 (PDT) From: Sharlatan Hellseher To: 73070@debbugs.gnu.org Subject: [PATCH 0/3] Fix python development environment Date: Thu, 26 Sep 2024 08:23:35 +0100 Message-ID: <87jzeyop3c.fsf@gmail.com> MIME-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 Cc: Ludovic =?utf-8?Q?Court=C3=A8s?= , Nicolas Graves X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) --=-=-= Content-Type: text/plain Hi Nicolas, IMHO for the quite a fundamental packages been updated 8 failing is quite a low amount. - python-scrapy@2.11.1 - python-funsor@0.4.5 - python-hyperkitty@1.3.5 - python-pytorch-geometric@2.4.0 - python-hicexplorer@3.7.4 - giara@1.0.1 - r-torch@0.13.0 - python-cellbender@0.2.2 It makes sense to merge this series and after CI digests the build fix all issues separately. -- Oleg --=-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEmEeB3micIcJkGAhndtcnv/Ys0rUFAmb1C/cACgkQdtcnv/Ys 0rW50RAAoVclPvCLxTgvv1eghpAiRZsoqLD+6ar3Q3XnXGJ94Pc2wl1icB757/b0 FPg/sonBa9d9prCAiub/abaOTR49DSfxsENeebXrt91ERngbl5SmXQsMTTL3gitG zwLYz8AG9JcDSnx2RiakYtWmhB1wBdrCD+69NQABA0fYnUOJXX3aZayDba3CvCBF 0r+2NSMuMR3S8JLsrL/pMoYvaJR29GJZTo7A4JVh2HL4sNTOeShiOB9RELwfvS8K 5rnwXskpgxNHftK3IgVpNqu1FWqL6q+obMGn/l0nfv37Yn9VRl87XUFh55EWAvyR 0i6SLrytQDAP3NWvvPKt+0LE5EwmpgiHMq7HAxwQLEhqDq2RzAya735cv1tgcBv0 u3dRhikC/GgosoJJBtG3AYf2cEI1OhodKdH9GBpN1DAWMUt0FG7TkoG5O+An3j/b F2dKTeZzpVVYE5Hr1ZETdFf1ByNPGbC0K3eSE//GuM7wQR2hje0jri+rZ62QBAbZ rSxqg12zAj4BTviKuqUSSoE59FSzi6/sn8M/QUNtr7nPeN2yHrURhSYYdPW2oVt0 v87QMnANm7N4QuROVVF4+FaHZ1giZj/8LBbtq/PEnfo9riaerVoZvoT8qMyB/xsB yzs8CBvyLBbUs+hAjGdSEDWuIG4rYHiWz7y4KmmH3NDBjtXuiqs= =TIZm -----END PGP SIGNATURE----- --=-=-=-- From debbugs-submit-bounces@debbugs.gnu.org Thu Sep 26 03:42:28 2024 Received: (at 73070) by debbugs.gnu.org; 26 Sep 2024 07:42:28 +0000 Received: from localhost ([127.0.0.1]:50814 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1stj8t-00024z-R2 for submit@debbugs.gnu.org; Thu, 26 Sep 2024 03:42:28 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:45530) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1stj8r-00024T-S8 for 73070@debbugs.gnu.org; Thu, 26 Sep 2024 03:42:26 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 9FA931DA6; Thu, 26 Sep 2024 09:41:52 +0200 (CEST) X-Virus-Scanned: Debian amavisd-new at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id zzHqsnhvqPl4; Thu, 26 Sep 2024 09:41:52 +0200 (CEST) Received: from jurong (unknown [IPv6:2001:861:c4:f2f0::c64]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 228C4263; Thu, 26 Sep 2024 09:41:52 +0200 (CEST) Date: Thu, 26 Sep 2024 09:41:50 +0200 From: Andreas Enge To: 73070@debbugs.gnu.org Subject: Apply patches Message-ID: MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hello Oleg, I considered pushing this patch series, but since you have already downloaded and applied it, I would suggest you do it instead. 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[86.8.111.200]) by smtp.gmail.com with ESMTPSA id a640c23a62f3a-a93930cae73sm324040366b.105.2024.09.26.02.32.22 for <73070-done@debbugs.gnu.org> (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Thu, 26 Sep 2024 02:32:23 -0700 (PDT) From: Sharlatan Hellseher To: 73070-done@debbugs.gnu.org Subject: [PATCH 0/3] Fix python development environment Date: Thu, 26 Sep 2024 10:32:22 +0100 Message-ID: <87h6a2oj4p.fsf@gmail.com> MIME-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73070-done X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) --=-=-= Content-Type: text/plain Hi, Pushed as e7004f5cf5..c46b23421e to master. Thanks, -- Oleg --=-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEmEeB3micIcJkGAhndtcnv/Ys0rUFAmb1KiYACgkQdtcnv/Ys 0rVeDg//UJhCWECRAUYSbeoHYdXvIc9BI9cwUN3kUSvYHVdg4f8yNvI8DmwRdetM fXsjWLuLYEwWIQ0qG6UfioafdC0T35s0ElnHwnL1OuDiQ84OMs6WJpEAwnjOqSZ/ fnW7FVbL+Y32QyDYgbipov9UJtbqQPMZfH5ATE/+gx09PtVAB8lFwiog5vDzNWZ/ 7H0K0ik/gEG5+a0zZhMx4+mOsWSh8yAceh8JRZGYXowgJGlcaU2CpX01XeOK9+1+ pTpWQ4mJi1cNJ5qM5StTphhjcCAZQQhfyFozZO9NQx0Lbsr0FWEbzMMBQkyrkvxe KYivLlOhqmBYMwhVslcjihzQev6ck1oFwc4MPgJ1x4rvobeUO3gbdpuzeSKAFyL3 SnF1Rqc0xbCO+yuHTs9lWXdwg7rjP0QTAEgEAkObEmEw6YbrMWVLtQ+yHmzGYI64 XTITF+lDaVYd3OphkJVODYjPJyAOw+vilTMxC34j319gnJktwX1nlJrj/EMJ4Z6G ahkXUTIJuzC/PV3bDVS0HsmSBn+qvpLAbYoQ7WJNDzJASeKcM0QADZpcSuyf1IsR b0B6kuyS+EOqJn9h8P8g9l9CqDkURqlTIaIQXaaofja1cy1fBRvUAdnO1TJAtd8j tiWV0AUYlUxBbBSjuQNvFvL1s8syXiAflbAnV5NC9IdHhzh5dMw= =m7Kc -----END PGP SIGNATURE----- --=-=-=-- From unknown Tue Sep 09 18:21:52 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Thu, 24 Oct 2024 11:24:21 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator