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Date: Wed, 4 Sep 2024 02:30:42 +0200 Message-ID: <48864048e5aa1ea50e568f62c275b684b3916aaa.1725409842.git.madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.45.2 MIME-Version: 1.0 X-Debbugs-Cc: Laurent Gatto , Ricardo Wurmus , Simon Tournier Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [141.80.219.20] X-ClientProxiedBy: SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3152-9.1.2019-28640.003 X-TM-AS-Result: No-10--4.020900-5.000000 X-TMASE-MatchedRID: NGDYxnKYxb0EZ1mm50iAbnOjEKYddvv63O2+pOfl+vcwLJ9PZUBQhdqK Kei3fK/BuP2uihwIy0iu5Y9WGrdMHtJZ1fvz4l6rb3Pl2Oyrc7BrcVVB7l3jOwLbwVZWOSEX/6J DwgdEkxzRXenBNWkRkggYVjvdF/FY/OHvzf9znHU+093PcBFs7mOKEs8foflOaRF2k6q/y/JhZg 4Tchb2XbINa6+7/S8JRAg+lR7XYOzwKwep2yrWF9h5c4TN8zbZXO2SJ/uvWJVyKUQT4+N7z1XOq MYNeYhmbgTrkKo/GuXzn6F40LPf6A669Q+JTBd/dQuayrYyU/jVH4CwxwyBGW345H/W8YB4L8aS JZUFAOOTahbk7IaGF/IPN3CngFeWxYO/ZNhG8iW051Z79ST++7Bk72SZpZa8/z4Ty9JAKR/JI5v npRHGyA== X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--4.020900-5.000000 X-TMASE-Version: SMEX-14.0.0.3152-9.1.2019-28640.003 X-TM-SNTS-SMTP: ACF12900CE897318B3BB0D1672E5FD7BAA4725154E68D9B2D354730AAD0D440F2000:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=MadalinIonel.Patrascu@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, PP_MIME_FAKE_ASCII_TEXT=0.001, RCVD_IN_DNSWL_MED=-2.3, RCVD_IN_VALIDITY_RPBL_BLOCKED=0.001, RCVD_IN_VALIDITY_SAFE_BLOCKED=0.001, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) From: =?UTF-8?q?Mădălin Ionel Patrașcu?= * gnu/packages/cran.scm (r-dtwclust): New variable. Change-Id: I411d25b5df8f9bf923e60602901105a612c42fe9 --- gnu/packages/cran.scm | 49 +++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 49 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 4ca23a5c4e..d8a12bfc81 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -10942,6 +10942,55 @@ (define-public r-ips phylogenies and ancestral character states.") (license license:gpl3))) +(define-public r-dtwclust + (package + (name "r-dtwclust") + (version "6.0.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "dtwclust" version)) + (sha256 + (base32 "0by01x4qpf1pin5l61wmm600bmsnlnns9knwb0qmjlj72pmwfkqh")))) + (properties `((upstream-name . "dtwclust"))) + (build-system r-build-system) + (propagated-inputs + (list r-clue + r-cluster + r-dplyr + r-dtw + r-flexclust + r-foreach + r-ggplot2 + r-ggrepel + r-matrix + r-proxy + r-rcpp + r-rcpparmadillo + r-rcppparallel + r-rcppthread + r-reshape2 + r-rlang + r-rspectra + r-shiny + r-shinyjs)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/asardaes/dtwclust") + (synopsis + "Clustering time series with dynamic time warping distance optimization") + (description + "This package implements time series clustering along with optimized +techniques related to the dynamic time warping distance and its corresponding +lower bounds. The implementations of partitional, hierarchical, fuzzy, k-Shape +and TADPole clustering are available. Functionality can be easily extended with +custom distance measures and centroid definitions. Implementations of @acronym{ +DTW, dynamic time warping} barycenter averaging, a distance based on global +alignment kernels, and the soft-DTW distance and centroid routines are also +provided. All included distance functions have custom loops optimized for the +calculation of cross-distance matrices, including parallelization support. +Several cluster validity indices are included.") + (license license:gpl3))) + (define-public r-dtw (package (name "r-dtw") base-commit: 7fa9df431e9423e2b79c8c520de1d0ef7aed910d -- 2.45.2 From debbugs-submit-bounces@debbugs.gnu.org Sat Sep 21 03:27:49 2024 Received: (at 73017-done) by debbugs.gnu.org; 21 Sep 2024 07:27:49 +0000 Received: from localhost ([127.0.0.1]:36959 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sruWz-0004W1-Dn for submit@debbugs.gnu.org; Sat, 21 Sep 2024 03:27:49 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:53728) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sruWx-0004Vh-FJ; Sat, 21 Sep 2024 03:27:47 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 1B81F3CA; Sat, 21 Sep 2024 09:27:21 +0200 (CEST) X-Virus-Scanned: Debian amavisd-new at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id ytNwJuG1wbBb; Sat, 21 Sep 2024 09:27:20 +0200 (CEST) Received: from jurong (unknown [IPv6:2001:861:c4:f2f0::c64]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 8D270332; Sat, 21 Sep 2024 09:27:20 +0200 (CEST) Date: Sat, 21 Sep 2024 09:27:18 +0200 From: Andreas Enge To: 73025-done@debbugs.gnu.org, 73017-done@debbugs.gnu.org Subject: Close Message-ID: MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 73017-done X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Pushed, thanks! 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