From unknown Sat Jun 14 19:04:58 2025 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.509 (Entity 5.509) Content-Type: text/plain; charset=utf-8 From: bug#71647 <71647@debbugs.gnu.org> To: bug#71647 <71647@debbugs.gnu.org> Subject: Status: [PATCH] gnu: Add r-cutpointr. Reply-To: bug#71647 <71647@debbugs.gnu.org> Date: Sun, 15 Jun 2025 02:04:58 +0000 retitle 71647 [PATCH] gnu: Add r-cutpointr. reassign 71647 guix-patches submitter 71647 "Afkhami, Navid" severity 71647 normal tag 71647 patch thanks From debbugs-submit-bounces@debbugs.gnu.org Wed Jun 19 06:48:29 2024 Received: (at submit) by debbugs.gnu.org; 19 Jun 2024 10:48:29 +0000 Received: from localhost ([127.0.0.1]:39678 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sJsrd-0000nz-2G for submit@debbugs.gnu.org; Wed, 19 Jun 2024 06:48:29 -0400 Received: from lists.gnu.org ([209.51.188.17]:44172) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sJsra-0000nq-U8 for submit@debbugs.gnu.org; Wed, 19 Jun 2024 06:48:27 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sJsrX-0000Lb-ED for guix-patches@gnu.org; Wed, 19 Jun 2024 06:48:23 -0400 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sJsrV-0002Kd-0l for guix-patches@gnu.org; Wed, 19 Jun 2024 06:48:23 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :x-mailer:message-id:date:date:subject:subject:from:from :received; s=mdc; t=1718794089; x=1720608490; bh=RcepiTdUIMMOx5w Wtc4jo3oZS/TEAXGNRpfxQPZJd8k=; b=HojeJVjdIxdeWYNLAlbjN+REohRJ1u7 QxwShhLpeuGhqujjPHmZQpSN12p5lWdtnsOEz/3qO7HI21b+JPNtnGRw4+8uumr6 8jbIRdCRMMxFGuLv05w+Xiec5Yw90Xliw4ZzIRqnFNLwn+SCU5J3IxG9DizZ8gir rOEmL+wYng4k= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id E8495A0142 for ; Wed, 19 Jun 2024 12:48:08 +0200 (CEST) Received: from localhost (141.80.218.27) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.2.1544.11; Wed, 19 Jun 2024 12:48:07 +0200 From: "Afkhami, Navid" To: Subject: [PATCH] gnu: Add r-cutpointr. Date: Wed, 19 Jun 2024 10:46:37 +0000 Message-ID: <771ef1935d7fa161da2ee81c735ddc8925c0dae2.1718793996.git.Navid.Afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.34.1 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [141.80.218.27] X-ClientProxiedBy: SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3152-9.1.2019-28462.007 X-TM-AS-Result: No-10--5.034400-5.000000 X-TMASE-MatchedRID: /+von0vPuFEEZ1mm50iAbnOjEKYddvv63O2+pOfl+vcwLJ9PZUBQhdqK Kei3fK/BuP2uihwIy0iu5Y9WGrdMHhV9IJL+D0rbju2XlcEx9HQIyIQE9neGFUEwlAH/PleezEm A+OOzl5GyDWuvu/0vCUQIPpUe12Ds8CsHqdsq1hfYeXOEzfM22Vztkif7r1iVcilEE+Pje89Vzq jGDXmIZrZE1GIgBbjG6sCS8JaN68UIAb4GlIQrNM9AKylOcRuM9BqKgadDyLw= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--5.034400-5.000000 X-TMASE-Version: SMEX-14.0.0.3152-9.1.2019-28462.007 X-TM-SNTS-SMTP: 74E034047651F2BA8E16003BFB128169BC0DE57EB7092F4EFB89FCFE0CC7085C2000:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-Debbugs-Envelope-To: submit Cc: "Afkhami, Navid" X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) * gnu/packages/cran.scm (r-cutpointr): New variable. Change-Id: I60e578fab1e251a526d90ce25dd1c3fc7ec4409d --- gnu/packages/cran.scm | 34 ++++++++++++++++++++++++++++++++++ 1 file changed, 34 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 85e0fa98f9..83f395a69e 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -704,6 +704,40 @@ (define-public r-curry etc.") (license license:gpl2+))) +(define-public r-cutpointr + (package + (name "r-cutpointr") + (version "1.1.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "cutpointr" version)) + (sha256 + (base32 "1qxnh20hs3bh9v04ls7gwwl7lfc6bwl8c88dn8lkcdqyp3nyr01j")))) + (properties `((upstream-name . "cutpointr"))) + (build-system r-build-system) + (propagated-inputs (list r-dplyr + r-foreach + r-ggplot2 + r-gridextra + r-purrr + r-rcpp + r-rlang + r-tibble + r-tidyr + r-tidyselect)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/thie1e/cutpointr") + (synopsis "Determine and evaluate optimal cutpoints in binary") + (description + "This package estimates optimal cutpoints for binary classification metrics. +It also validates performance using bootstrapping. Some methods for more +robust cutpoint estimation are supported, e.g. a parametric method assuming +normal distributions, bootstrapped cutpoints, and smoothing of the metric +values per cutpoint using Generalized Additive Models. Various plotting +functions are included.") + (license license:gpl3))) + (define-public r-datawizard (package (name "r-datawizard") base-commit: da1f3aff2ea9a98651ebc69c8385ba136fe2e325 -- 2.34.1 From debbugs-submit-bounces@debbugs.gnu.org Sun Jun 30 04:50:36 2024 Received: (at 71647-done) by debbugs.gnu.org; 30 Jun 2024 08:50:36 +0000 Received: from localhost ([127.0.0.1]:54964 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sNqGa-0001Ka-1i for submit@debbugs.gnu.org; Sun, 30 Jun 2024 04:50:36 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:58736) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sNqGX-0001KA-Gv; Sun, 30 Jun 2024 04:50:34 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 7105ABDD; Sun, 30 Jun 2024 10:50:27 +0200 (CEST) X-Virus-Scanned: Debian amavisd-new at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id ESo0_oJwIypQ; Sun, 30 Jun 2024 10:50:27 +0200 (CEST) Received: from jurong (unknown [IPv6:2001:861:c4:f2f0::c64]) by hera.aquilenet.fr (Postfix) with ESMTPSA id DC40A1E6; Sun, 30 Jun 2024 10:50:26 +0200 (CEST) Date: Sun, 30 Jun 2024 10:50:25 +0200 From: Andreas Enge To: 71647-done@debbugs.gnu.org, 71649-done@debbugs.gnu.org, 71650-done@debbugs.gnu.org Subject: Close Message-ID: MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 71647-done X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Thanks for the patches, I have pushed them after small changes to the synopsis or description and adding a 2024 copyright line for you. Andreas From unknown Sat Jun 14 19:04:58 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Sun, 28 Jul 2024 11:24:12 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator