Subject: Re: [PATCH] gnu: kallisto: Update to 0.50.1

From: Ricardo Wurmus <[email-masked]>
Date: Sat, 01 Jun 2024 21:13:30 +0200

Thank you for the patch!

> I had to modify the 'do-not-use-bundled-htslib snippet to make one
> regex more selective---in this new version it the previous regex was
> mistakenly modifying parts of CMakeLists.txt other than the intended
> one.

It looks like this might not be working as intended.  I used:

    guix gc -R $(./pre-inst-env guix build kallisto)

and it shows me that the newly built kallisto does not link with our
htslib.  Perhaps it used the static library?

-- 
Ricardo