Package: guix-patches;
Reported by: Nicolas Graves <ngraves <at> ngraves.fr>
Date: Fri, 10 May 2024 07:50:01 UTC
Severity: normal
Tags: patch
View this message in rfc822 format
From: Nicolas Graves <ngraves <at> ngraves.fr> To: 70858 <at> debbugs.gnu.org Cc: Nicolas Graves <ngraves <at> ngraves.fr> Subject: [bug#70858] [PATCH v5 23/48] build-system/pyproject: Remove python-isort native-input. Date: Thu, 27 Feb 2025 15:27:24 +0100
* gnu/packages/bioinformatics.scm (python-metacells, python-cooler,
scvelo)
* gnu/packages/databases.scm (aerich)
* gnu/packages/finance.scm (python-trezor)
* gnu/packages/gettext.scm (mdpo)
* gnu/packages/graphviz.scm (python-uqbar)
* gnu/packages/machine-learning.scm (python-pymanopt, python-funsor)
* gnu/packages/mail.scm (python-hyperkitty, postorius)
* gnu/packages/protobuf.scm (python-pure-protobuf)
* gnu/packages/python-web.scm (python-zeep, python-ovh, python-tinycss2)
* gnu/packages/python-xyz.scm (python-archspec)
* gnu/packages/statistics.scm (python-statsmodels)
* gnu/packages/virtualization.scm (python-qemu-qmp)
[native-inputs]: Remove python-isort.
---
gnu/packages/bioinformatics.scm | 3 ---
gnu/packages/databases.scm | 1 -
gnu/packages/finance.scm | 1 -
gnu/packages/gettext.scm | 1 -
gnu/packages/graphviz.scm | 1 -
gnu/packages/machine-learning.scm | 4 +---
gnu/packages/mail.scm | 2 --
gnu/packages/protobuf.scm | 2 +-
gnu/packages/python-web.scm | 4 +---
gnu/packages/python-xyz.scm | 3 +--
gnu/packages/statistics.scm | 1 -
gnu/packages/virtualization.scm | 1 -
12 files changed, 4 insertions(+), 20 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index bb8ac5c800..4294016f44 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3168,7 +3168,6 @@ (define-public python-metacells
python-threadpoolctl
python-umap-learn))
(native-inputs (list python-bumpversion
- python-isort
python-mypy
python-mypy-extensions
python-pandas-stubs
@@ -19935,7 +19934,6 @@ (define-public python-cooler
python-simplejson))
(native-inputs
(list python-hatchling
- python-isort
python-pytest
python-pytest-cov))
;; Almost all the projects of the Mirnylab are moved under Open2C umbrella
@@ -24030,7 +24028,6 @@ (define-public scvelo
(propagated-inputs
(list python-anndata
python-hnswlib
- python-isort
python-igraph
python-loompy
python-louvain
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index 085a1d7cd0..df2045db9d 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -3459,7 +3459,6 @@ (define-public aerich
(list poetry
python-bandit
python-cryptography
- python-isort
python-pydantic
python-pytest
python-pytest-asyncio
diff --git a/gnu/packages/finance.scm b/gnu/packages/finance.scm
index f3be674c01..3af525da18 100644
--- a/gnu/packages/finance.scm
+++ b/gnu/packages/finance.scm
@@ -1160,7 +1160,6 @@ (define-public python-trezor
python-typing-extensions))
(native-inputs ; Only needed for running the tests
(list protobuf
- python-isort
python-pillow
python-protobuf
python-pyqt
diff --git a/gnu/packages/gettext.scm b/gnu/packages/gettext.scm
index 29cdbab915..841d3e0c8b 100644
--- a/gnu/packages/gettext.scm
+++ b/gnu/packages/gettext.scm
@@ -228,7 +228,6 @@ (define-public mdpo
(list python-bump2version
python-flake8-implicit-str-concat
python-flake8-print
- python-isort
python-pytest
python-pytest-cov
python-sphinx
diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm
index 6bfe5325ac..33ddbeba42 100644
--- a/gnu/packages/graphviz.scm
+++ b/gnu/packages/graphviz.scm
@@ -224,7 +224,6 @@ (define-public python-uqbar
and not test_sphinx_book_text_broken_strict")))
(native-inputs
(list graphviz
- python-isort
python-pytest
python-pytest-cov
python-setuptools
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index 649648ac4e..8c1e99ba99 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -229,8 +229,7 @@ (define-public python-funsor
(propagated-inputs (list python-makefun python-multipledispatch
python-numpy python-opt-einsum
python-typing-extensions))
- (native-inputs (list python-isort
- python-nbsphinx
+ (native-inputs (list python-nbsphinx
python-pandas
python-pillow
python-pyro-api
@@ -1143,7 +1142,6 @@ (define-public python-pymanopt
(propagated-inputs (list python-numpy python-scipy))
(native-inputs (list python-autograd
python-flake8-bugbear
- python-isort
python-matplotlib
python-pytest
python-pytest-cov
diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm
index cffbca087a..b353e5cf51 100644
--- a/gnu/packages/mail.scm
+++ b/gnu/packages/mail.scm
@@ -3813,7 +3813,6 @@ (define-public python-hyperkitty
python-django-rest-framework
python-elasticsearch
python-flufl-lock
- python-isort
python-lxml
python-mailmanclient
python-mistune
@@ -3864,7 +3863,6 @@ (define-public postorius
python-django-mailman3))
(native-inputs
(list python-beautifulsoup4
- python-isort
python-mock
python-pdm-backend
python-pytest
diff --git a/gnu/packages/protobuf.scm b/gnu/packages/protobuf.scm
index 203e4909d6..487c03fa94 100644
--- a/gnu/packages/protobuf.scm
+++ b/gnu/packages/protobuf.scm
@@ -502,7 +502,7 @@ (define-public python-pure-protobuf
(base32 "15dp5pvazd0jx4wzzh79080ah7hkpd3axh40al9vhzs2hf3v90hx"))))
(build-system python-build-system)
(native-inputs
- (list python-pytest python-pytest-cov python-isort))
+ (list python-pytest python-pytest-cov))
(arguments
`(#:phases
(modify-phases %standard-phases
diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm
index 5b33ed4568..2248d62195 100644
--- a/gnu/packages/python-web.scm
+++ b/gnu/packages/python-web.scm
@@ -1601,8 +1601,7 @@ (define-public python-ovh
(build-system pyproject-build-system)
(arguments (list #:tests? #f)) ; XXX: tests require networking
(propagated-inputs (list python-requests))
- (native-inputs (list python-isort
- python-pytest
+ (native-inputs (list python-pytest
python-pytest-cov
python-setuptools
python-sphinx
@@ -10131,7 +10130,6 @@ (define-public python-zeep
python-flake8-blind-except
python-flake8-debugger
python-freezegun
- python-isort
python-pretend
python-pytest
python-pytest-asyncio
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 657ac6e4d0..74cec98420 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -396,8 +396,7 @@ (define-public python-archspec
python-scikit-learn
python-tables
python-typing-extensions))
- (native-inputs (list python-isort
- python-poetry-core
+ (native-inputs (list python-poetry-core
python-pytest
python-pytest-cov))
(home-page "https://github.com/archspec/archspec")
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 7a02786ab6..0344074366 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -2669,7 +2669,6 @@ (define-public python-statsmodels
(native-inputs
(list python-colorama
python-cython
- python-isort
python-joblib
python-matplotlib
python-pytest
diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm
index a6872a3f1f..d1e2130980 100644
--- a/gnu/packages/virtualization.scm
+++ b/gnu/packages/virtualization.scm
@@ -2120,7 +2120,6 @@ (define-public python-qemu-qmp
(native-inputs
(list python-avocado-framework
python-flake8
- python-isort
python-setuptools
python-setuptools-scm
python-wheel))
--
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