Subject: [bug#70858] [PATCH v5 23/48] build-system/pyproject: Remove python-isort native-input.

From: Nicolas Graves <[email-masked]>
Date: Thu, 27 Feb 2025 15:27:24 +0100

* gnu/packages/bioinformatics.scm (python-metacells, python-cooler,
  scvelo)
* gnu/packages/databases.scm (aerich)
* gnu/packages/finance.scm (python-trezor)
* gnu/packages/gettext.scm (mdpo)
* gnu/packages/graphviz.scm (python-uqbar)
* gnu/packages/machine-learning.scm (python-pymanopt, python-funsor)
* gnu/packages/mail.scm (python-hyperkitty, postorius)
* gnu/packages/protobuf.scm (python-pure-protobuf)
* gnu/packages/python-web.scm (python-zeep, python-ovh, python-tinycss2)
* gnu/packages/python-xyz.scm (python-archspec)
* gnu/packages/statistics.scm (python-statsmodels)
* gnu/packages/virtualization.scm (python-qemu-qmp)
[native-inputs]: Remove python-isort.
---
 gnu/packages/bioinformatics.scm   | 3 ---
 gnu/packages/databases.scm        | 1 -
 gnu/packages/finance.scm          | 1 -
 gnu/packages/gettext.scm          | 1 -
 gnu/packages/graphviz.scm         | 1 -
 gnu/packages/machine-learning.scm | 4 +---
 gnu/packages/mail.scm             | 2 --
 gnu/packages/protobuf.scm         | 2 +-
 gnu/packages/python-web.scm       | 4 +---
 gnu/packages/python-xyz.scm       | 3 +--
 gnu/packages/statistics.scm       | 1 -
 gnu/packages/virtualization.scm   | 1 -
 12 files changed, 4 insertions(+), 20 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index bb8ac5c800..4294016f44 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3168,7 +3168,6 @@ (define-public python-metacells
                              python-threadpoolctl
                              python-umap-learn))
     (native-inputs (list python-bumpversion
-                         python-isort
                          python-mypy
                          python-mypy-extensions
                          python-pandas-stubs
@@ -19935,7 +19934,6 @@ (define-public python-cooler
            python-simplejson))
     (native-inputs
      (list python-hatchling
-           python-isort
            python-pytest
            python-pytest-cov))
     ;; Almost all the projects of the Mirnylab are moved under Open2C umbrella
@@ -24030,7 +24028,6 @@ (define-public scvelo
     (propagated-inputs
      (list python-anndata
            python-hnswlib
-           python-isort
            python-igraph
            python-loompy
            python-louvain
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index 085a1d7cd0..df2045db9d 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -3459,7 +3459,6 @@ (define-public aerich
      (list poetry
            python-bandit
            python-cryptography
-           python-isort
            python-pydantic
            python-pytest
            python-pytest-asyncio
diff --git a/gnu/packages/finance.scm b/gnu/packages/finance.scm
index f3be674c01..3af525da18 100644
--- a/gnu/packages/finance.scm
+++ b/gnu/packages/finance.scm
@@ -1160,7 +1160,6 @@ (define-public python-trezor
            python-typing-extensions))
     (native-inputs ; Only needed for running the tests
      (list protobuf
-           python-isort
            python-pillow
            python-protobuf
            python-pyqt
diff --git a/gnu/packages/gettext.scm b/gnu/packages/gettext.scm
index 29cdbab915..841d3e0c8b 100644
--- a/gnu/packages/gettext.scm
+++ b/gnu/packages/gettext.scm
@@ -228,7 +228,6 @@ (define-public mdpo
      (list python-bump2version
            python-flake8-implicit-str-concat
            python-flake8-print
-           python-isort
            python-pytest
            python-pytest-cov
            python-sphinx
diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm
index 6bfe5325ac..33ddbeba42 100644
--- a/gnu/packages/graphviz.scm
+++ b/gnu/packages/graphviz.scm
@@ -224,7 +224,6 @@ (define-public python-uqbar
 and not test_sphinx_book_text_broken_strict")))
     (native-inputs
      (list graphviz
-           python-isort
            python-pytest
            python-pytest-cov
            python-setuptools
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index 649648ac4e..8c1e99ba99 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -229,8 +229,7 @@ (define-public python-funsor
     (propagated-inputs (list python-makefun python-multipledispatch
                              python-numpy python-opt-einsum
                              python-typing-extensions))
-    (native-inputs (list python-isort
-                         python-nbsphinx
+    (native-inputs (list python-nbsphinx
                          python-pandas
                          python-pillow
                          python-pyro-api
@@ -1143,7 +1142,6 @@ (define-public python-pymanopt
     (propagated-inputs (list python-numpy python-scipy))
     (native-inputs (list python-autograd
                          python-flake8-bugbear
-                         python-isort
                          python-matplotlib
                          python-pytest
                          python-pytest-cov
diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm
index cffbca087a..b353e5cf51 100644
--- a/gnu/packages/mail.scm
+++ b/gnu/packages/mail.scm
@@ -3813,7 +3813,6 @@ (define-public python-hyperkitty
            python-django-rest-framework
            python-elasticsearch
            python-flufl-lock
-           python-isort
            python-lxml
            python-mailmanclient
            python-mistune
@@ -3864,7 +3863,6 @@ (define-public postorius
            python-django-mailman3))
     (native-inputs
      (list python-beautifulsoup4
-           python-isort
            python-mock
            python-pdm-backend
            python-pytest
diff --git a/gnu/packages/protobuf.scm b/gnu/packages/protobuf.scm
index 203e4909d6..487c03fa94 100644
--- a/gnu/packages/protobuf.scm
+++ b/gnu/packages/protobuf.scm
@@ -502,7 +502,7 @@ (define-public python-pure-protobuf
         (base32 "15dp5pvazd0jx4wzzh79080ah7hkpd3axh40al9vhzs2hf3v90hx"))))
     (build-system python-build-system)
     (native-inputs
-     (list python-pytest python-pytest-cov python-isort))
+     (list python-pytest python-pytest-cov))
     (arguments
      `(#:phases
        (modify-phases %standard-phases
diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm
index 5b33ed4568..2248d62195 100644
--- a/gnu/packages/python-web.scm
+++ b/gnu/packages/python-web.scm
@@ -1601,8 +1601,7 @@ (define-public python-ovh
     (build-system pyproject-build-system)
     (arguments (list #:tests? #f))      ; XXX: tests require networking
     (propagated-inputs (list python-requests))
-    (native-inputs (list python-isort
-                         python-pytest
+    (native-inputs (list python-pytest
                          python-pytest-cov
                          python-setuptools
                          python-sphinx
@@ -10131,7 +10130,6 @@ (define-public python-zeep
            python-flake8-blind-except
            python-flake8-debugger
            python-freezegun
-           python-isort
            python-pretend
            python-pytest
            python-pytest-asyncio
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 657ac6e4d0..74cec98420 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -396,8 +396,7 @@ (define-public python-archspec
                              python-scikit-learn
                              python-tables
                              python-typing-extensions))
-    (native-inputs (list python-isort
-                         python-poetry-core
+    (native-inputs (list python-poetry-core
                          python-pytest
                          python-pytest-cov))
     (home-page "https://github.com/archspec/archspec")
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 7a02786ab6..0344074366 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -2669,7 +2669,6 @@ (define-public python-statsmodels
     (native-inputs
      (list python-colorama
            python-cython
-           python-isort
            python-joblib
            python-matplotlib
            python-pytest
diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm
index a6872a3f1f..d1e2130980 100644
--- a/gnu/packages/virtualization.scm
+++ b/gnu/packages/virtualization.scm
@@ -2120,7 +2120,6 @@ (define-public python-qemu-qmp
     (native-inputs
      (list python-avocado-framework
            python-flake8
-           python-isort
            python-setuptools
            python-setuptools-scm
            python-wheel))
-- 
2.48.1