From debbugs-submit-bounces@debbugs.gnu.org Sun Dec 31 06:57:49 2023 Received: (at submit) by debbugs.gnu.org; 31 Dec 2023 11:57:50 +0000 Received: from localhost ([127.0.0.1]:45761 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJuRx-0007cU-Jv for submit@debbugs.gnu.org; Sun, 31 Dec 2023 06:57:49 -0500 Received: from lists.gnu.org ([2001:470:142::17]:56684) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJuRw-0007cI-Hm for submit@debbugs.gnu.org; Sun, 31 Dec 2023 06:57:49 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rJuRp-0004Mj-Nw for guix-patches@gnu.org; Sun, 31 Dec 2023 06:57:41 -0500 Received: from mout-p-202.mailbox.org ([2001:67c:2050:0:465::202]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_CHACHA20_POLY1305:256) (Exim 4.90_1) (envelope-from ) id 1rJuRf-0005kJ-Jg for guix-patches@gnu.org; Sun, 31 Dec 2023 06:57:41 -0500 Received: from smtp102.mailbox.org (smtp102.mailbox.org [10.196.197.102]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by mout-p-202.mailbox.org (Postfix) with ESMTPS id 4T2yKH2xWWz9sbF for ; Sun, 31 Dec 2023 12:57:23 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=troyfigiel.com; s=MBO0001; t=1704023843; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type; bh=DFglITUE83OYvMqG3M7/v+nbhI4a6h+po4L7s7CyD3g=; b=dKdxXE5KKQFxghpVJPuGQdJ15e1GMbBv8LYuxBJrsWZcLKcJftKaIv3Qnit/l/EfVdpK76 ppFE1UIYdLVEEv/RcD3Gm9MS2w27glC1rgywCiqbESFHM4bGOuWxMGcfa9AvPE/Am7srwj quxH3CRw7ECO3cCKuX/CDFbsHOsObpN1yhZgno+SXW+hnsqsNPYskL13OR6V4D8lqK25lS hZKgC+0uGKOE5lMdt8+cb5srD+zOSctcI+Cj1cCggMRW2WNkrjBRZH8eQ4BC2cidT4pJF0 JMTg4rRGg4tvvlXc8yuiiduokrbnpwazIyeMnNpG4fX4uUviTCw+Xo6pP9aIHw== From: Troy Figiel To: guix-patches@gnu.org Subject: [PATCH 0/2] Enable tests for python-h5py Date: Sun, 31 Dec 2023 12:52:32 +0100 Message-ID: <875y0einz5.fsf@troyfigiel.com> MIME-Version: 1.0 Content-Type: text/plain Received-SPF: pass client-ip=2001:67c:2050:0:465::202; envelope-from=troy@troyfigiel.com; helo=mout-p-202.mailbox.org X-Spam_score_int: -27 X-Spam_score: -2.8 X-Spam_bar: -- X-Spam_report: (-2.8 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_LOW=-0.7, SPF_HELO_NONE=0.001, T_SCC_BODY_TEXT_LINE=-0.01, T_SPF_TEMPERROR=0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 1.0 (+) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -0.0 (/) While writing a different package definition, I noticed python-h5py does not have any of its tests enabled. To make the tests pass, only two new packages needed to be added to the native inputs. A total of 130 dependent packages would need to be rebuilt. Although it seems unlikely that only adding tests would break dependent builds, I checked that locally all dependent packages that could be built before this patch series, can still be built when these patches are applied (at least for x86_64-linux). Troy Figiel (2): gnu: python-h5py: Enable tests. gnu: python-h5py: Reformat with guix style. gnu/packages/python-xyz.scm | 30 +++++++++++++----------------- 1 file changed, 13 insertions(+), 17 deletions(-) base-commit: 2a242e86379ebddbdddf2927f26e5e27a98fc605 -- 2.40.1 From debbugs-submit-bounces@debbugs.gnu.org Sun Dec 31 07:05:49 2023 Received: (at 68171) by debbugs.gnu.org; 31 Dec 2023 12:05:50 +0000 Received: from localhost ([127.0.0.1]:45767 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJuZh-000214-Hv for submit@debbugs.gnu.org; Sun, 31 Dec 2023 07:05:49 -0500 Received: from mout-p-201.mailbox.org ([80.241.56.171]:36668) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJuZf-00020q-1u for 68171@debbugs.gnu.org; Sun, 31 Dec 2023 07:05:48 -0500 Received: from smtp1.mailbox.org (smtp1.mailbox.org [IPv6:2001:67c:2050:b231:465::1]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by mout-p-201.mailbox.org (Postfix) with ESMTPS id 4T2yVn6sD5z9sbm for <68171@debbugs.gnu.org>; Sun, 31 Dec 2023 13:05:37 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=troyfigiel.com; s=MBO0001; t=1704024337; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type; bh=JhWDO5Ij3HWFeq2BIhqvy4gKu3Pp6NJMj2JC2PSB6+Y=; b=rgKa6La8wnBTrXT9aVjNKvaVO6KjNGl1y3DIEbzp/Ryrpl2G8K6AkJ0qHgTzoL/KLKpnGa E7isDzm0/pCbyUea5uCuZIgfW1YhFwKKzl2+ccSpt8j5n3Ar/kMfdxWIgEL535UVAPME/h CpYvJS7AaFrnx+GVuTYxrJQvrF032isETVdlV9F3fBJmXo1q5/UCoNtM08a4C8Ab8XhsD4 OsfRaEkD4/tWHApCE6bpmjuOyik+h6xnKCzgY0/Z8YX0UpzFXdkzcFhERo+m68HLUOcoa1 Yit6/q2nGi+QtKJMfiNy2LWnwP5+57W2AGUMm14bpylGxJUPGWl6TpwGsJFsJQ== From: Troy Figiel To: 68171@debbugs.gnu.org Subject: [PATCH 1/2] gnu: python-h5py: Enable tests. Date: Sat, 30 Dec 2023 11:36:37 +0100 Message-ID: <874jfyinlb.fsf@troyfigiel.com> MIME-Version: 1.0 Content-Type: text/plain X-Rspamd-Queue-Id: 4T2yVn6sD5z9sbm X-Spam-Score: -0.2 (/) X-Debbugs-Envelope-To: 68171 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.2 (-) * gnu/packages/python-xyz.scm (python-h5py)[native-inputs]: Add python-ipython and python-pytest. Change-Id: Ia1cae8bce802805c9d9b38a3bf515423f9b719b4 --- gnu/packages/python-xyz.scm | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 2afce6c667..b5384b7c42 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -2257,8 +2257,7 @@ (define-public python-h5py "0pyr6z4h2xqbp49yx2i1401gl6yqh03h771zslwcy0201hpxiskg")))) (build-system python-build-system) (arguments - `(#:tests? #f ; no test target - #:phases + '(#:phases (modify-phases %standard-phases (add-after 'unpack 'fix-hdf5-paths (lambda* (#:key inputs #:allow-other-keys) @@ -2268,7 +2267,7 @@ (define-public python-h5py (inputs (list hdf5-1.10)) (native-inputs - (list python-cython python-pkgconfig pkg-config)) + (list python-cython python-ipython python-pkgconfig python-pytest pkg-config)) (home-page "https://www.h5py.org/") (synopsis "Read and write HDF5 files from Python") (description -- 2.40.1 From debbugs-submit-bounces@debbugs.gnu.org Sun Dec 31 07:07:06 2023 Received: (at 68171) by debbugs.gnu.org; 31 Dec 2023 12:07:06 +0000 Received: from localhost ([127.0.0.1]:45772 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJuaw-00023J-3T for submit@debbugs.gnu.org; Sun, 31 Dec 2023 07:07:06 -0500 Received: from mout-p-103.mailbox.org ([80.241.56.161]:45736) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJuat-00022o-W3 for 68171@debbugs.gnu.org; Sun, 31 Dec 2023 07:07:04 -0500 Received: from smtp1.mailbox.org (smtp1.mailbox.org [10.196.197.1]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by mout-p-103.mailbox.org (Postfix) with ESMTPS id 4T2yXH0M49z9svW for <68171@debbugs.gnu.org>; Sun, 31 Dec 2023 13:06:55 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=troyfigiel.com; s=MBO0001; t=1704024415; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type; bh=Uovhs8m+UlJMXgVtbyaIWqhgkjTQWLtSTnaKkehQ0EE=; b=LO+NRfE/GjkRG+yE/tA+uHtVCep+Tfvc0mSdbqYUjLgkP1cgffZ5fg9lgPIZSjFRkVtt/f ZfsYiC/ZXdImblcY/1KuRjJ9laGccnl2YcMv8ltUh456wfEbUuZxfh2MTwD+HH3TVeh1fU nnvS+aCVWKcrPcef+QjfPExXrP6C1xu+Q6w3NYOgv3sYvWJLA/TGKfmE243o3F3doafnfI /HUa6q1P/2CBf5Up1ytCogmhWo2c857xdMLmJJuawLcHE7WKKyuiMY0qTyjAWY8zkWIekH I6K633ogMzcGCQUJEqC+jrbDwMNQs/t0GlmBCyadYcQE+FSaeFG8O+eFyle/JA== From: Troy Figiel To: 68171@debbugs.gnu.org Subject: [PATCH 2/2] gnu: python-h5py: Reformat with guix style. Date: Sat, 30 Dec 2023 12:06:37 +0100 Message-ID: <8734viinj5.fsf@troyfigiel.com> MIME-Version: 1.0 Content-Type: text/plain X-Spam-Score: -0.2 (/) X-Debbugs-Envelope-To: 68171 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.2 (-) * gnu/packages/python-xyz.scm (python-h5py): Reformat with guix style. Change-Id: I9c8fabcb8a438909ff70a2c98c9e01b3a82079f3 --- gnu/packages/python-xyz.scm | 29 +++++++++++++---------------- 1 file changed, 13 insertions(+), 16 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index b5384b7c42..3015f0356f 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -2250,24 +2250,21 @@ (define-public python-h5py (version "3.8.0") (source (origin - (method url-fetch) - (uri (pypi-uri "h5py" version)) - (sha256 - (base32 - "0pyr6z4h2xqbp49yx2i1401gl6yqh03h771zslwcy0201hpxiskg")))) + (method url-fetch) + (uri (pypi-uri "h5py" version)) + (sha256 + (base32 "0pyr6z4h2xqbp49yx2i1401gl6yqh03h771zslwcy0201hpxiskg")))) (build-system python-build-system) (arguments - '(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'fix-hdf5-paths - (lambda* (#:key inputs #:allow-other-keys) - (setenv "HDF5_DIR" (assoc-ref inputs "hdf5"))))))) - (propagated-inputs - (list python-six python-numpy)) - (inputs - (list hdf5-1.10)) - (native-inputs - (list python-cython python-ipython python-pkgconfig python-pytest pkg-config)) + '(#:phases (modify-phases %standard-phases + (add-after 'unpack 'fix-hdf5-paths + (lambda* (#:key inputs #:allow-other-keys) + (setenv "HDF5_DIR" + (assoc-ref inputs "hdf5"))))))) + (propagated-inputs (list python-six python-numpy)) + (inputs (list hdf5-1.10)) + (native-inputs (list pkg-config python-cython python-ipython + python-pkgconfig python-pytest)) (home-page "https://www.h5py.org/") (synopsis "Read and write HDF5 files from Python") (description -- 2.40.1 From debbugs-submit-bounces@debbugs.gnu.org Tue Jan 09 04:09:42 2024 Received: (at 68171-done) by debbugs.gnu.org; 9 Jan 2024 09:09:42 +0000 Received: from localhost ([127.0.0.1]:38337 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rN87C-0005pf-0v for submit@debbugs.gnu.org; Tue, 09 Jan 2024 04:09:42 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:50564) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rN879-0005pQ-LR for 68171-done@debbugs.gnu.org; Tue, 09 Jan 2024 04:09:40 -0500 Received: from fencepost.gnu.org ([2001:470:142:3::e]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rN86w-0006FA-SW; Tue, 09 Jan 2024 04:09:27 -0500 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:Date:References:In-Reply-To:Subject:To: From; bh=xRbMpvUogzMauH4WheFsT6od5wcS4ZeXjMMS1pCNP+c=; b=Xk62Hg1Xk3BXzJ0wA6/C GzUsy1Sqjb5VAuEitvTxdIF0pgfPQjfo/EK2ldRs9MuacEsxUijfTMXpYSTE2sbATL+aFV+IyPGHC o/JBnmk7O4KehcDtyhxfKzN6AzgLLg00K/fKsu3Eq1txQC5RN9QgRm5d8npzgV77hCfTZmzgrZzm9 xgY7wxwA8N1ivV7VHvJ1Bw9LvPnKCtwAqQI5eT/egFfFeGQCJebKFFLX8Yzc7WGgy+xMGfpfkPIKg 3epBpXqPcEScgD7Jp4arfH8h5MocDs56Li5P9L2xRLJILZ6w8cQuRlAoh/Ah8m1qoOFX6qWV2viNe RLz9TT2yxQd7rQ==; From: Mathieu Othacehe To: Troy Figiel Subject: Re: [bug#68171] [PATCH 0/2] Enable tests for python-h5py In-Reply-To: <875y0einz5.fsf@troyfigiel.com> (Troy Figiel's message of "Sun, 31 Dec 2023 12:52:32 +0100") References: <875y0einz5.fsf@troyfigiel.com> Date: Tue, 09 Jan 2024 10:09:24 +0100 Message-ID: <87plyadgaj.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 68171-done Cc: 68171-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) > While writing a different package definition, I noticed python-h5py does > not have any of its tests enabled. To make the tests pass, only two new > packages needed to be added to the native inputs. > > A total of 130 dependent packages would need to be rebuilt. Although it > seems unlikely that only adding tests would break dependent builds, I > checked that locally all dependent packages that could be built before > this patch series, can still be built when these patches are applied (at > least for x86_64-linux). Agreed. Applied, thanks! Mathieu From unknown Sat Jun 14 03:57:07 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Tue, 06 Feb 2024 12:24:14 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator