From unknown Sat Jun 14 19:15:03 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#68142] [PATCH] gnu: Add python-hdf5storage. Resent-From: Troy Figiel Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 30 Dec 2023 10:47:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 68142 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 68142@debbugs.gnu.org X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.170393322132307 (code B ref -1); Sat, 30 Dec 2023 10:47:02 +0000 Received: (at submit) by debbugs.gnu.org; 30 Dec 2023 10:47:01 +0000 Received: from localhost ([127.0.0.1]:43124 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJWrs-0008P1-Nz for submit@debbugs.gnu.org; Sat, 30 Dec 2023 05:47:01 -0500 Received: from lists.gnu.org ([2001:470:142::17]:54734) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJWrq-0008Oe-4s for submit@debbugs.gnu.org; Sat, 30 Dec 2023 05:46:58 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rJWrX-000283-V4 for guix-patches@gnu.org; Sat, 30 Dec 2023 05:46:43 -0500 Received: from mout-p-102.mailbox.org ([2001:67c:2050:0:465::102]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_CHACHA20_POLY1305:256) (Exim 4.90_1) (envelope-from ) id 1rJWrV-0001SK-Vm for guix-patches@gnu.org; Sat, 30 Dec 2023 05:46:39 -0500 Received: from smtp1.mailbox.org (smtp1.mailbox.org [10.196.197.1]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by mout-p-102.mailbox.org (Postfix) with ESMTPS id 4T2Jnz1GPFz9sb6 for ; Sat, 30 Dec 2023 11:46:31 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=troyfigiel.com; s=MBO0001; t=1703933191; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type; bh=t6zRBg1eTEHKdmMPnDD7Ssjh3mvCZsRX1mfo+OC5eRE=; b=iCQiI191j74zQJpZQOqI2skGJ7C/dasUGWNsvttvypC4W70c5KAoWyPobJM0+fxwrYjAiq Q3Rb2FHcLqB72vhCyhJg6933oBGttDnYJl1iVpv64d0Bnxvt2B9BMUnNqIgkTDcugSmaZg IRuQpIMe4QjGLgcnoJdGxpq3gADxaOQmB9JFI5pCPbxQtICHgO/g7XsYALPw5ey4EJJKSC CwBeTFa0DDLefz0WZsvlpTFtcr3f71x2xqbX7nkBxRNnP/41En1fp2ukN+cx/6yLdcvke4 sTvYEGb/bVeDtdB0XrIUk6c6xjJi27rMhb9593AGavqGW2ITe6c5iWNk78okhQ== From: Troy Figiel Date: Sat, 30 Dec 2023 11:44:31 +0100 Message-ID: <87o7e82cjv.fsf@troyfigiel.com> MIME-Version: 1.0 Content-Type: text/plain Received-SPF: pass client-ip=2001:67c:2050:0:465::102; envelope-from=troy@troyfigiel.com; helo=mout-p-102.mailbox.org X-Spam_score_int: -27 X-Spam_score: -2.8 X-Spam_bar: -- X-Spam_report: (-2.8 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_LOW=-0.7, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 2.0 (++) X-Spam-Report: Spam detection software, running on the system "debbugs.gnu.org", has NOT identified this incoming email as spam. The original message has been attached to this so you can view it or label similar future email. If you have any questions, see the administrator of that system for details. Content preview: * gnu/packages/python-xyz.scm (python-hdf5storage): New variable. Change-Id: If54c5f4b634658854bbe9312dce194643fe23733 --- gnu/packages/python-xyz.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) Content analysis details: (2.0 points, 10.0 required) pts rule name description ---- ---------------------- -------------------------------------------------- 1.0 SPF_SOFTFAIL SPF: sender does not match SPF record (softfail) -0.0 SPF_HELO_PASS SPF: HELO matches SPF record -0.0 T_SCC_BODY_TEXT_LINE No description available. 1.0 TVD_SUBJ_NUM_OBFU_MINFP No description available. X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -0.0 (/) * gnu/packages/python-xyz.scm (python-hdf5storage): New variable. Change-Id: If54c5f4b634658854bbe9312dce194643fe23733 --- gnu/packages/python-xyz.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 2afce6c667..594059f25e 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -2279,6 +2279,30 @@ (define-public python-h5py concepts.") (license license:bsd-3))) +(define-public python-hdf5storage + (package + (name "python-hdf5storage") + (version "0.1.19") + (source + (origin + (method url-fetch) + (uri (pypi-uri "hdf5storage" version)) + (sha256 + (base32 "11pgxsqap9l7jsf52649q9mpj8a0w6p9im929lpr9s26ynnnn6ks")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-h5py python-numpy)) + (native-inputs (list python-nose)) + (home-page "https://github.com/frejanordsiek/hdf5storage") + (synopsis "Read and write Python data types from and to HDF5 files") + (description + "This Python package provides high-level utilities to read and write a +variety of Python types from and to @acronym{HDF5, Hierarchical Data Format} +formatted files. This package also provides support for MATLAB MAT v7.3 +formatted files, which are HDF5 files with a different extension and some +extra metadata. Because HDF5 and MAT files might need to be read from +untrusted sources, pickling is avoided in this package.") + (license license:bsd-2))) + (define-public python-hjson ;; Using commit from master branch as the PyPI version does not contain ;; the hjson/tests/ directory. base-commit: f24b14767d362a84e6469682b4fe303b50f4b589 -- 2.40.1 From unknown Sat Jun 14 19:15:03 2025 MIME-Version: 1.0 X-Mailer: MIME-tools 5.505 (Entity 5.505) X-Loop: help-debbugs@gnu.org From: help-debbugs@gnu.org (GNU bug Tracking System) To: Troy Figiel Subject: bug#68142: closed (Re: [bug#68142] [PATCH] gnu: Add python-hdf5storage.) Message-ID: References: <878r4yevm2.fsf@gnu.org> <87o7e82cjv.fsf@troyfigiel.com> X-Gnu-PR-Message: they-closed 68142 X-Gnu-PR-Package: guix-patches X-Gnu-PR-Keywords: patch Reply-To: 68142@debbugs.gnu.org Date: Tue, 09 Jan 2024 08:54:02 +0000 Content-Type: multipart/mixed; boundary="----------=_1704790442-10668-1" This is a multi-part message in MIME format... ------------=_1704790442-10668-1 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable Content-Type: text/plain; charset="utf-8" Your bug report #68142: [PATCH] gnu: Add python-hdf5storage. which was filed against the guix-patches package, has been closed. The explanation is attached below, along with your original report. If you require more details, please reply to 68142@debbugs.gnu.org. --=20 68142: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D68142 GNU Bug Tracking System Contact help-debbugs@gnu.org with problems ------------=_1704790442-10668-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at 68142-done) by debbugs.gnu.org; 9 Jan 2024 08:53:28 +0000 Received: from localhost ([127.0.0.1]:38294 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rN7rT-0002ky-PF for submit@debbugs.gnu.org; Tue, 09 Jan 2024 03:53:27 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:53436) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rN7rR-0002kf-VH for 68142-done@debbugs.gnu.org; Tue, 09 Jan 2024 03:53:26 -0500 Received: from fencepost.gnu.org ([2001:470:142:3::e]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rN7rF-0007nB-Ch; Tue, 09 Jan 2024 03:53:13 -0500 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:Date:References:In-Reply-To:Subject:To: From; bh=GnjEGvcA+cg03zdxfLEFB/wRQBXsow5AU60IXfR71SE=; b=iQ1NZ9yLvtrRmT1RFpDw wDOu6OZ9tXZU25GEpAeAOnFxJPHOub24+cu6oQ1uZvgr00EujrcOnvs+7rhxPwfnt9BDKpmInPD12 4u8vWY2RNgpJlh1llpgdt8TqJKM1Fy46lhj/E2ma7TysA4AlQqNUaeW5Ork6HCf6cvTIJCoL87asN MxTxM9WOhJ5ePtAg0YRUMawu7FiQtxhpI2qeYeeO5Z7Lmx64WOko7W+lo9L8bxBeoZsaGVTIb3w2W 73/W8SHhGWTCDfSFZ5AnT/WeemQV1Ehe3gFwZ9UxMXTZRWPqVD/0Rbvqv7JwcE8BNfckJaNaaRCLp i+X+s9Xhn776FQ==; From: Mathieu Othacehe To: Troy Figiel Subject: Re: [bug#68142] [PATCH] gnu: Add python-hdf5storage. In-Reply-To: <87o7e82cjv.fsf@troyfigiel.com> (Troy Figiel's message of "Sat, 30 Dec 2023 11:44:31 +0100") References: <87o7e82cjv.fsf@troyfigiel.com> Date: Tue, 09 Jan 2024 09:53:09 +0100 Message-ID: <878r4yevm2.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 68142-done Cc: 68142-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) > * gnu/packages/python-xyz.scm (python-hdf5storage): New variable. Applied, thanks, Mathieu ------------=_1704790442-10668-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at submit) by debbugs.gnu.org; 30 Dec 2023 10:47:01 +0000 Received: from localhost ([127.0.0.1]:43124 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJWrs-0008P1-Nz for submit@debbugs.gnu.org; Sat, 30 Dec 2023 05:47:01 -0500 Received: from lists.gnu.org ([2001:470:142::17]:54734) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rJWrq-0008Oe-4s for submit@debbugs.gnu.org; Sat, 30 Dec 2023 05:46:58 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rJWrX-000283-V4 for guix-patches@gnu.org; Sat, 30 Dec 2023 05:46:43 -0500 Received: from mout-p-102.mailbox.org ([2001:67c:2050:0:465::102]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_CHACHA20_POLY1305:256) (Exim 4.90_1) (envelope-from ) id 1rJWrV-0001SK-Vm for guix-patches@gnu.org; Sat, 30 Dec 2023 05:46:39 -0500 Received: from smtp1.mailbox.org (smtp1.mailbox.org [10.196.197.1]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by mout-p-102.mailbox.org (Postfix) with ESMTPS id 4T2Jnz1GPFz9sb6 for ; Sat, 30 Dec 2023 11:46:31 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=troyfigiel.com; s=MBO0001; t=1703933191; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type; bh=t6zRBg1eTEHKdmMPnDD7Ssjh3mvCZsRX1mfo+OC5eRE=; b=iCQiI191j74zQJpZQOqI2skGJ7C/dasUGWNsvttvypC4W70c5KAoWyPobJM0+fxwrYjAiq Q3Rb2FHcLqB72vhCyhJg6933oBGttDnYJl1iVpv64d0Bnxvt2B9BMUnNqIgkTDcugSmaZg IRuQpIMe4QjGLgcnoJdGxpq3gADxaOQmB9JFI5pCPbxQtICHgO/g7XsYALPw5ey4EJJKSC CwBeTFa0DDLefz0WZsvlpTFtcr3f71x2xqbX7nkBxRNnP/41En1fp2ukN+cx/6yLdcvke4 sTvYEGb/bVeDtdB0XrIUk6c6xjJi27rMhb9593AGavqGW2ITe6c5iWNk78okhQ== From: Troy Figiel To: guix-patches@gnu.org Subject: [PATCH] gnu: Add python-hdf5storage. Date: Sat, 30 Dec 2023 11:44:31 +0100 Message-ID: <87o7e82cjv.fsf@troyfigiel.com> MIME-Version: 1.0 Content-Type: text/plain Received-SPF: pass client-ip=2001:67c:2050:0:465::102; envelope-from=troy@troyfigiel.com; helo=mout-p-102.mailbox.org X-Spam_score_int: -27 X-Spam_score: -2.8 X-Spam_bar: -- X-Spam_report: (-2.8 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_LOW=-0.7, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 2.0 (++) X-Spam-Report: Spam detection software, running on the system "debbugs.gnu.org", has NOT identified this incoming email as spam. The original message has been attached to this so you can view it or label similar future email. If you have any questions, see the administrator of that system for details. Content preview: * gnu/packages/python-xyz.scm (python-hdf5storage): New variable. Change-Id: If54c5f4b634658854bbe9312dce194643fe23733 --- gnu/packages/python-xyz.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) Content analysis details: (2.0 points, 10.0 required) pts rule name description ---- ---------------------- -------------------------------------------------- 1.0 SPF_SOFTFAIL SPF: sender does not match SPF record (softfail) -0.0 SPF_HELO_PASS SPF: HELO matches SPF record -0.0 T_SCC_BODY_TEXT_LINE No description available. 1.0 TVD_SUBJ_NUM_OBFU_MINFP No description available. X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -0.0 (/) * gnu/packages/python-xyz.scm (python-hdf5storage): New variable. Change-Id: If54c5f4b634658854bbe9312dce194643fe23733 --- gnu/packages/python-xyz.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 2afce6c667..594059f25e 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -2279,6 +2279,30 @@ (define-public python-h5py concepts.") (license license:bsd-3))) +(define-public python-hdf5storage + (package + (name "python-hdf5storage") + (version "0.1.19") + (source + (origin + (method url-fetch) + (uri (pypi-uri "hdf5storage" version)) + (sha256 + (base32 "11pgxsqap9l7jsf52649q9mpj8a0w6p9im929lpr9s26ynnnn6ks")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-h5py python-numpy)) + (native-inputs (list python-nose)) + (home-page "https://github.com/frejanordsiek/hdf5storage") + (synopsis "Read and write Python data types from and to HDF5 files") + (description + "This Python package provides high-level utilities to read and write a +variety of Python types from and to @acronym{HDF5, Hierarchical Data Format} +formatted files. This package also provides support for MATLAB MAT v7.3 +formatted files, which are HDF5 files with a different extension and some +extra metadata. Because HDF5 and MAT files might need to be read from +untrusted sources, pickling is avoided in this package.") + (license license:bsd-2))) + (define-public python-hjson ;; Using commit from master branch as the PyPI version does not contain ;; the hjson/tests/ directory. base-commit: f24b14767d362a84e6469682b4fe303b50f4b589 -- 2.40.1 ------------=_1704790442-10668-1--