GNU bug report logs - #66966
[Patch] gnu: Add r-bcrank, r-bbcanalyzer, r-baynorm, r-bb, r-bayesspace, r-rcppdist, r-bayesknockdown, r-basicstarrseq, r-basics, r-basic4cseq, r-bsgenome-ecoli-ncbi-20080805, r-bags and r-breastcancervdx

Previous Next

Package: guix-patches;

Reported by: Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>

Date: Mon, 6 Nov 2023 11:02:01 UTC

Severity: normal

Tags: patch

Done: Ricardo Wurmus <rekado <at> elephly.net>

Bug is archived. No further changes may be made.

Full log


View this message in rfc822 format

From: Mădălin Ionel Patrașcu
 <madalinionel.patrascu <at> mdc-berlin.de>
To: <66966 <at> debbugs.gnu.org>
Cc: Ricardo Wurmus <rekado <at> elephly.net>
Subject: [bug#66966] [PATCH 01/13] gnu: Add r-breastcancervdx.
Date: Mon, 6 Nov 2023 12:06:37 +0100
* gnu/packages/bioconductor.scm (r-breastcancervdx): New variable.

Change-Id: Ia3437ab67a00ce23c61553ff15f940b8a3ee9c8a
---
 gnu/packages/bioconductor.scm | 20 ++++++++++++++++++++
 1 file changed, 20 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index fe5ca9fbc7..04a1f2a710 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1463,6 +1463,26 @@ (define-public r-breakpointrdata
 demonstrate functionalities of the @code{breakpointR} package.")
     (license license:expat)))
 
+(define-public r-breastcancervdx
+  (package
+    (name "r-breastcancervdx")
+    (version "1.40.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "breastCancerVDX" version
+                              'experiment))
+       (sha256
+        (base32 "12r8zql30ssr0cxy8v1qawwsky54321c737ny19n2yrl7sm08gf0"))))
+    (properties `((upstream-name . "breastCancerVDX")))
+    (build-system r-build-system)
+    (home-page "https://bioconductor.org/packages/breastCancerVDX")
+    (synopsis "Gene expression datasets published")
+    (description
+     "This package is a collection of gene expression data from a breast cancer
+study published in Wang et al. 2005 and Minn et al 2007.")
+    (license license:artistic2.0)))
+
 (define-public r-celldex
   (package
     (name "r-celldex")

base-commit: c9361460dece1dbc3d2645ad3e5c79e85a2bf183
-- 
2.41.0





This bug report was last modified 1 year and 190 days ago.

Previous Next


GNU bug tracking system
Copyright (C) 1999 Darren O. Benham, 1997,2003 nCipher Corporation Ltd, 1994-97 Ian Jackson.