GNU bug report logs - #66530
[PATCH] gnu: Add r-metacell.

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Ricardo Wurmus <rekado <at> elephly.net>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#66528: closed ([PATCH 2/2] gnu: Add r-tgstat.)
Date: Tue, 17 Oct 2023 12:35:04 +0000

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Your message dated Tue, 17 Oct 2023 14:33:33 +0200
with message-id <87mswhjumh.fsf <at> elephly.net>
and subject line [PATCH] gnu: Add r-metacell.
has caused the debbugs.gnu.org bug report #66530,
regarding [PATCH 2/2] gnu: Add r-tgstat.
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs <at> gnu.org.)


-- 
66530: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=66530
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

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From: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Cc: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
Subject: [PATCH 2/2] gnu: Add r-tgstat.
Date: Fri, 13 Oct 2023 15:57:15 +0000

* gnu/packages/cran.scm (r-tgstat): New variable.
---
 gnu/packages/cran.scm | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 1c37635ea5..de31f44dbd 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -3257,6 +3257,29 @@ (define-public r-tgp
 noisy black-box functions.")
     (license license:lgpl2.0+)))
 
+(define-public r-tgstat
+  (package
+    (name "r-tgstat")
+    (version "2.3.24")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "tgstat" version))
+       (sha256
+        (base32 "0czd3j7z30jgb03813s0jc0701ypnwpkkq7var6n6f6cj7sdvc0l"))))
+    (properties `((upstream-name . "tgstat")))
+    (build-system r-build-system)
+    (native-inputs (list r-knitr))
+    (home-page "https://cran.r-project.org/package=tgstat")
+    (synopsis "Amos Tanay's Group High Performance Statistical Utilities")
+    (description
+     "This package provides a collection of high-performance utilities.
+It can be used to compute distances, correlations, autocorrelations,
+clustering, and other tasks.  It also contains a graph clustering
+algorithm described in MetaCell analysis of single-cell RNA-seq
+data using K-nn graph partitions.")
+    (license license:gpl2)))
+
 (define-public r-tidyft
   (package
     (name "r-tidyft")
-- 
2.34.1

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From: Ricardo Wurmus <rekado <at> elephly.net>
To: 66530-done <at> debbugs.gnu.org
Subject: [PATCH] gnu: Add r-metacell.
Date: Tue, 17 Oct 2023 14:33:33 +0200

Thanks for the patches.  I applied them after some massaging.

-- 
Ricardo

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