GNU bug report logs - #66530
[PATCH] gnu: Add r-metacell.

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
Subject: bug#66527: closed ([PATCH] gnu: Add r-metacell.)
Date: Tue, 17 Oct 2023 12:35:03 +0000

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Your bug report

#66530: [PATCH 1/2] gnu: Remove r-tgstat.

which was filed against the guix-patches package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to 66527 <at> debbugs.gnu.org.

-- 
66530: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=66530
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

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From: Ricardo Wurmus <rekado <at> elephly.net>
To: 66530-done <at> debbugs.gnu.org
Subject: [PATCH] gnu: Add r-metacell.
Date: Tue, 17 Oct 2023 14:33:33 +0200

Thanks for the patches.  I applied them after some massaging.

-- 
Ricardo

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From: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Cc: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
Subject: [PATCH 1/2] gnu: Remove r-tgstat.
Date: Fri, 13 Oct 2023 15:57:14 +0000

* gnu/packages/statistics.scm (r-tgstat): Delete variable.
---
 gnu/packages/statistics.scm | 35 -----------------------------------
 1 file changed, 35 deletions(-)

diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index a21b47a9d3..7d6ec71e6f 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -6525,41 +6525,6 @@ (define-public r-forcats
 manually \"recoding\").")
     (license license:gpl3)))
 
-(define-public r-tgstat
-  (let ((changeset "4f8e60c03598f49aff6f5beeab40f2b995377e9f")
-        (revision "1"))
-    (package
-      (name "r-tgstat")
-      (version (string-append "1.0.2-" revision "." (string-take changeset 7)))
-      (source
-       (origin
-         (method hg-fetch)
-         (uri (hg-reference
-               (url "https://bitbucket.org/tanaylab/tgstat")
-               (changeset changeset)))
-         (file-name (string-append name "-" version "-checkout"))
-         (sha256
-          (base32
-           "0ilkkyximy77zbncm91kdfqbxf0qyndg16pd3q3p6a3xc9qcmxvn"))))
-      (build-system r-build-system)
-      (arguments
-       `(#:phases
-         (modify-phases %standard-phases
-           (add-after 'unpack 'fix-isnan
-             (lambda _
-               (substitute* "src/tgstat.h"
-                 (("#define isnan ::isnan")
-                  "#define isnan std::isnan"))
-               #t)))))
-      (propagated-inputs
-       (list r-rcpp))
-      (home-page "https://bitbucket.org/tanaylab/tgstat/")
-      (synopsis "Tanay's group statistical utilities")
-      (description
-       "The goal of tgstat is to provide fast and efficient statistical
-tools.")
-      (license license:gpl2))))
-
 (define-public r-tgconfig
   (let ((commit "15cf199436ae0b2ac0006b2ca7f0aeeb5c9d4445")
         (revision "1"))

base-commit: dcfd4d9c4827ca6bfebeec46fe6bb8373c425a1c
prerequisite-patch-id: 8b3f1b30e7ca1f6ddb21bf801faad91cce276dfd
prerequisite-patch-id: 86f04eb38885c80e1fa302cec734581778e62c26
-- 
2.34.1

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