From unknown Sat Jun 21 17:35:13 2025 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.509 (Entity 5.509) Content-Type: text/plain; charset=utf-8 From: bug#66529 <66529@debbugs.gnu.org> To: bug#66529 <66529@debbugs.gnu.org> Subject: Status: [PATCH] gnu: Add r-tgutil. Reply-To: bug#66529 <66529@debbugs.gnu.org> Date: Sun, 22 Jun 2025 00:35:13 +0000 retitle 66529 [PATCH] gnu: Add r-tgutil. reassign 66529 guix-patches submitter 66529 "Afkhami, Navid" severity 66529 normal tag 66529 patch thanks From debbugs-submit-bounces@debbugs.gnu.org Fri Oct 13 12:05:12 2023 Received: (at submit) by debbugs.gnu.org; 13 Oct 2023 16:05:12 +0000 Received: from localhost ([127.0.0.1]:47262 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qrKf2-0002QF-9E for submit@debbugs.gnu.org; Fri, 13 Oct 2023 12:05:12 -0400 Received: from lists.gnu.org ([2001:470:142::17]:52822) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qrKez-0002Py-9F for submit@debbugs.gnu.org; Fri, 13 Oct 2023 12:05:10 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qrKeV-0001Lb-Ic for guix-patches@gnu.org; Fri, 13 Oct 2023 12:04:39 -0400 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qrKeR-0000XE-Rl for guix-patches@gnu.org; Fri, 13 Oct 2023 12:04:39 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :x-mailer:message-id:date:date:subject:subject:from:from :received; s=mdc; t=1697213070; x=1699027471; bh=QJ8AO+egEYGDcV7 jpHEiypHNWNil7LXrXEKXcMKzbbM=; b=KrClI/qRonzqUsjUni45csHs9286mXU 433EFiI/oxopCZ56O/g+3J8AP76YOmA2J+dOEt5qfmLFm2pAGqQKpoM3LOUgeX5e P0YZNdQvU6eJ6PJI9+0J2IX03I74Epq5O0LzgvbBuGWBALW9kmOV9GhEapWnl3L/ Btc95bJZNlnc= Received: from SW-IT-P-EX2.mdc-berlin.net (mgw2.mdc-berlin.de [141.80.113.60]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id BB65EA0196 for ; Fri, 13 Oct 2023 18:04:30 +0200 (CEST) Received: from localhost (141.80.218.27) by SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.34; Fri, 13 Oct 2023 18:04:28 +0200 From: "Afkhami, Navid" To: Subject: [PATCH] gnu: Add r-tgutil. Date: Fri, 13 Oct 2023 16:04:23 +0000 Message-ID: <3bae0cbdbc255c3e8157fe0557b13d8d5492d589.1697213063.git.Navid.Afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.34.1 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [141.80.218.27] X-ClientProxiedBy: SW-IT-P-EX1.mdc-berlin.net (141.80.113.54) To SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27934.000 X-TM-AS-Result: No-10--4.083400-5.000000 X-TMASE-MatchedRID: /+von0vPuFH/R1NSMc2qCU7nLUqYrlslFIuBIWrdOePfUZT83lbkEIyd mby1eQX7K1OIo1kOJjPuNT8xdcEnQwE+dA3RWUSvnVTWWiNp+v/F0kjYVlocoaY5ZGw7wyeHsht nDV+JCwSD/SpuYoqPDS5rYfHE0OO9qOJ+h+s5fKarm7DrUlmNkIAy6p60ZV62fJ5/bZ6npdjKay T/BQTiGv5fvMZNNUw/LOdYKnQ7SwABSrGp4LbU7EPq7GKol3cf7bnP2nCXI7yt2k9rNXFvwzJSu rQGfBWHfCuGUJvgGxRcmvq/Zr23+eWrs/+5064veFv61dDRnYf0c5qUjgqLKvYlQeU3xrH0XtGJ m2N/3yI= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--4.083400-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27934.000 X-TM-SNTS-SMTP: 09A03BC912A03661755ADCEEEB2EB4A91B8505D3287D74FA175C8ADE51406EC52000:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 0.9 (/) X-Debbugs-Envelope-To: submit Cc: "Afkhami, Navid" X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -0.1 (/) * gnu/packages/statistics.scm (r-tgutil): New variable. --- gnu/packages/statistics.scm | 37 +++++++++++++++++++++++++++++++++++++ 1 file changed, 37 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 7d6ec71e6f..7bdcc00cac 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -6556,6 +6556,43 @@ (define-public r-tgconfig can load multiple parameters to the current environment.") (license license:gpl3+)))) +(define-public r-tgutil + (let ((commit "0e4a2e84e5cf1f74bc66df0a3d8eac89633fd7b1") + (revision "1")) + (package + (name "r-tgutil") + (version (git-version "0.1.15" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/tanaylab/tgutil") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0pmacpzhrigprlpl8b5j4xz7l110ifw98017xwk569dghbf8zrq1")))) + (properties `((upstream-name . "tgutil"))) + (build-system r-build-system) + (propagated-inputs (list r-broom + r-cowplot + r-data-table + r-dplyr + r-ggplot2 + r-glue + r-magrittr + r-matrix + r-matrixstats + r-qlcmatrix + r-readr + r-rlang + r-scales + r-tibble + r-tidyr)) + (home-page "https://github.com/tanaylab/tgutil") + (synopsis "Simple utility functions for Tanay lab code") + (description "Shared utility functions for multiple Tanay lab packages.") + (license license:gpl3)))) + (define-public r-catterplots (let ((commit "ae17cd5e49ddda4ecfe0eba8a4c21df8c88e72c4") (revision "3")) base-commit: dcfd4d9c4827ca6bfebeec46fe6bb8373c425a1c prerequisite-patch-id: 8b3f1b30e7ca1f6ddb21bf801faad91cce276dfd prerequisite-patch-id: 86f04eb38885c80e1fa302cec734581778e62c26 prerequisite-patch-id: d5cebe9646097c611915c8b796a94ff0d1831343 prerequisite-patch-id: 675ed63512dcf5b145a929d0097b1bb7e7f1c389 -- 2.34.1 From debbugs-submit-bounces@debbugs.gnu.org Tue Oct 17 08:32:19 2023 Received: (at control) by debbugs.gnu.org; 17 Oct 2023 12:32:19 +0000 Received: from localhost ([127.0.0.1]:58796 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qsjFD-0004Bi-JI for submit@debbugs.gnu.org; Tue, 17 Oct 2023 08:32:19 -0400 Received: from sender4-of-o51.zoho.com ([136.143.188.51]:21112) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qsjF8-0004BV-VE for control@debbugs.gnu.org; Tue, 17 Oct 2023 08:32:18 -0400 ARC-Seal: i=1; a=rsa-sha256; t=1697545905; cv=none; d=zohomail.com; s=zohoarc; b=FXX7r1zccCNyD5GQy3z0iGtcvxr7yJ6xvXrNr2+Htm/VOjoJsa/5MSlnALmZEKkojfLzO65eDoC162Um9gAyo1v0HZrJfDOzx/eUjjMieMhQygTp59KDtRMkzRz4k7qv8RcZPPbdWvR8C/te6cfnwahqf4x7r76PUXGnEP72sT0= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1697545905; h=Content-Type:Date:Date:From:From:MIME-Version:Message-ID:To:To:Message-Id:Reply-To:Subject:Cc; bh=A2OFROw83Gp2jIHwpbID6odi5l7ESv9nuyixNi0h610=; b=P7/jvTg0E5CfnWdwzwYz7PBMfwCMbb8pzNm9Wi6fzOg93tRznFYkNCTTBgf+Sz1+nFh8b8l+E7Vcci9z2vOAaTxTbRKRzUiahqOEXAlGakB9I2JQOdsS27mXKvkuq+55UO/mDnT9EQWXf+epcTDWP6bamw4uP2X/uqgzYHaWhlc= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1697545905; s=zoho; d=elephly.net; i=rekado@elephly.net; h=From:From:To:To:Subject:Subject:Date:Date:Message-ID:MIME-Version:Content-Type:Message-Id:Reply-To:Cc; bh=A2OFROw83Gp2jIHwpbID6odi5l7ESv9nuyixNi0h610=; b=YfAW6W94d+u5NhSferyiIDGo1FQamPbeLAMTGp6J1LiA4t+wGNAtX61SzffRSqKh 5NxC20QX2FItUz6Qs06foW18PphrmCkaP8tyq2Xb7MJXaJv38ntV+jaPKvdHRiXycLg E1fnMaUhJppHHRf9rNP5UuKHoponkxwlemUJLOgo= Received: from localhost (14-108-142-46.pool.kielnet.net [46.142.108.14]) by mx.zohomail.com with SMTPS id 1697545903741776.3236170423603; Tue, 17 Oct 2023 05:31:43 -0700 (PDT) User-agent: mu4e 1.10.7; emacs 29.1 From: Ricardo Wurmus To: control@debbugs.gnu.org Subject: Date: Tue, 17 Oct 2023 14:30:42 +0200 Message-ID: <87r0ltjuqb.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain X-ZohoMailClient: External X-Spam-Score: 2.0 (++) X-Spam-Report: Spam detection software, running on the system "debbugs.gnu.org", has NOT identified this incoming email as spam. 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