GNU bug report logs - #66070
[PATCH] gnu: python-pygenometracks: Remove syntax error in setup.py.

Previous Next

Package: guix-patches;

Reported by: Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>

Date: Mon, 18 Sep 2023 11:18:01 UTC

Severity: normal

Tags: patch

Done: Ricardo Wurmus <rekado <at> elephly.net>

Bug is archived. No further changes may be made.

Full log

Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Mădălin Ionel Patrașcu
 <madalinionel.patrascu <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Subject: [PATCH] gnu: python-pygenometracks: Remove syntax error in setup.py.
Date: Mon, 18 Sep 2023 13:16:44 +0200

* gnu/packages/bioinformatics.scm (python-pygenometracks)[arguments]:
Add phase remove-invalid-syntax.
---
 gnu/packages/bioinformatics.scm | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index c78f017a24..e6d5edba94 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -16405,7 +16405,11 @@ (define-public python-pygenometracks
            (lambda _
              (substitute* "setup.py"
                (("matplotlib ==3.1.1")
-                "matplotlib >=3.1.1")))))))
+                "matplotlib >=3.1.1"))))
+         (add-after 'unpack 'remove-invalid-syntax
+           (lambda _
+             (substitute* "setup.py"
+               ((".\\*,") ",")))))))
     (propagated-inputs
      (list python-future
            python-gffutils

base-commit: 1d30ec935126f316187dfc26446347bc7de9868b
-- 
2.41.0
This bug report was last modified 1 year and 243 days ago.

Previous Next

GNU bug tracking system
Copyright (C) 1999 Darren O. Benham, 1997,2003 nCipher Corporation Ltd, 1994-97 Ian Jackson.