GNU bug report logs - #65201
[PATCH] gnu: Add r-partr2.

Previous Next

To add a comment to this bug, you must first unarchive it, by sending
a message to control AT debbugs.gnu.org, with unarchive 65201 in the body.
You can then email your comments to 65201 AT debbugs.gnu.org in the normal way.

Toggle the display of automated, internal messages from the tracker.

Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Cc: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
Subject: [PATCH] gnu: Add r-partr2.
Date: Thu, 10 Aug 2023 10:28:35 +0000

* gnu/packages/bioinformatics.scm (r-partr2): New variable.
---
 gnu/packages/bioinformatics.scm | 28 ++++++++++++++++++++++++++++
 1 file changed, 28 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b847c9a5d7..29f5403702 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -947,6 +947,34 @@ (define-public r-numbat
 solely on the donor scRNA-data data (for example, 10x Cell Ranger output).")
       (license license:expat))))
 
+(define-public r-partr2
+  (package
+    (name "r-partr2")
+    (version "0.9.1")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "partR2" version))
+              (sha256
+               (base32
+                "06ky0hhrq0mcsn9rwrzvwn0rrjj0l8rxs0hqp10668gdq5hjk8bn"))))
+    (properties `((upstream-name . "partR2")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-dplyr
+                             r-ggplot2
+                             r-lme4
+                             r-magrittr
+                             r-pbapply
+                             r-purrr
+                             r-rlang
+                             r-tibble
+                             r-tidyr))
+    (native-inputs (list r-knitr))
+    (home-page "https://github.com/mastoffel/partR2")
+    (synopsis "Partitioning R2 in GLMMs")
+    (description
+     "An R tool for estimating and partitioning R2 in GLMMs based on predictor variance.")
+    (license license:gpl2+)))
+
 (define-public r-p2data
   (let ((commit "7d4c0e17d7899f9d9b08ab2bf455abe150912f4c")
         (revision "1"))

base-commit: 997b38badaee20a1c60411e5e599e260e47785ec
-- 
2.34.1

Message #10 received at 65201-done <at> debbugs.gnu.org (full text, mbox):

From: Ricardo Wurmus <rekado <at> elephly.net>
To: 65201-done <at> debbugs.gnu.org
Subject: [PATCH] gnu: Add r-partr2.
Date: Fri, 11 Aug 2023 00:32:58 +0200

Thanks for the patch.  I relocated the package to cran.scm and adjusted
the description.

-- 
Ricardo

Previous Next

GNU bug tracking system
Copyright (C) 1999 Darren O. Benham, 1997,2003 nCipher Corporation Ltd, 1994-97 Ian Jackson.