GNU bug report logs - #64559
[PATCH] gnu: freesasa: Fix memerr tests.

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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: David Elsing <david.elsing <at> posteo.net>
To: guix-patches <at> gnu.org
Cc: David Elsing <david.elsing <at> posteo.net>
Subject: [PATCH] gnu: freesasa: Fix memerr tests.
Date: Mon, 10 Jul 2023 18:06:11 +0000

* gnu/packages/chemistry.scm (freesasa)[arguments]: Add
"CFLAGS=-fno-builtin-malloc" to #:configure-flags.
---
 gnu/packages/chemistry.scm | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/chemistry.scm b/gnu/packages/chemistry.scm
index cddccf8aea..431b845989 100644
--- a/gnu/packages/chemistry.scm
+++ b/gnu/packages/chemistry.scm
@@ -703,7 +703,11 @@ (define-public freesasa
       #~(list "--enable-check"
               "--enable-parser-generator"
               "CXXFLAGS=-std=c++17"
-              "--enable-doxygen")
+              "--enable-doxygen"
+              ;; Some tests rely on replacing malloc with a wrapper which
+              ;; fails in a controlled way, but this does not work if the call
+              ;; is replaced.
+              "CFLAGS=-fno-builtin-malloc")
       #:phases
       #~(modify-phases %standard-phases
           (add-after 'unpack 'remove-libc++-linking
-- 
2.40.1

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