From unknown Tue Jun 24 05:14:28 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#64289] [PATCH] gnu: Add python-deepxde. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sun, 25 Jun 2023 22:30:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 64289 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 64289@debbugs.gnu.org Cc: Vinicius Monego X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16877321881806 (code B ref -1); Sun, 25 Jun 2023 22:30:03 +0000 Received: (at submit) by debbugs.gnu.org; 25 Jun 2023 22:29:48 +0000 Received: from localhost ([127.0.0.1]:43930 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qDYEt-0000T3-Hr for submit@debbugs.gnu.org; Sun, 25 Jun 2023 18:29:47 -0400 Received: from lists.gnu.org ([209.51.188.17]:55252) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qDYEr-0000Sv-74 for submit@debbugs.gnu.org; Sun, 25 Jun 2023 18:29:46 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qDYEr-0000VU-1C for guix-patches@gnu.org; Sun, 25 Jun 2023 18:29:45 -0400 Received: from mout02.posteo.de ([185.67.36.66]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qDYEo-0001yx-Se for guix-patches@gnu.org; Sun, 25 Jun 2023 18:29:44 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id DC966240101 for ; Mon, 26 Jun 2023 00:29:40 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1687732180; bh=3ZaWT46EQ9ZyOFcxQ/Zyv4ZQsDgEY7nb5+GdC+ZBj6A=; h=From:To:Cc:Subject:Date:Message-Id:MIME-Version: Content-Transfer-Encoding:From; b=jrswRwT4DNiGKtGwAt1A8WlRlOwBay4paBIrhgQ94u7iukwSK3oV5KoTTkMfoAh7c IJJckwl5lKZXLkRxKFxLkwbDWiQrEKR51IEr7tciQBSPXvnJxuDYegyG0QfQPxTeUf 7Bx/qivKkntbPE6pF2rB5e7t3CCggcHI9/KIG6gT99z7Oo1XKuyxpjchoFz3sXnRTx 9LIbpDnujF5VE+m27Z7ejSWtt2ZGW/xMFePw57OYIX2Rl3IWBS87Vd4sSKGTS6dqiy 0xlXMVfxm1KLQCAtqvFAXgErOkYRDO3SXbetxTbT8Em9H0JrWn8aD3MDrTQjEqfDAf UWNLGmLjFppKw== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4Qq5J3046fz9rxG; Mon, 26 Jun 2023 00:29:38 +0200 (CEST) From: Vinicius Monego Date: Sun, 25 Jun 2023 22:29:16 +0000 Message-Id: <20230625222916.82599-1-monego@posteo.net> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Received-SPF: pass client-ip=185.67.36.66; envelope-from=monego@posteo.net; helo=mout02.posteo.de X-Spam_score_int: -53 X-Spam_score: -5.4 X-Spam_bar: ----- X-Spam_report: (-5.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, RCVD_IN_MSPIKE_H5=-1, RCVD_IN_MSPIKE_WL=-0.01, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.3 (-) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) * gnu/packages/machine-learning.scm (python-deepxde): New variable. --- gnu/packages/machine-learning.scm | 33 +++++++++++++++++++++++++++++++ 1 file changed, 33 insertions(+) diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 8fbb0274d4..ddb773b8ce 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -1936,6 +1936,39 @@ (define-public python-hyperopt discrete, and conditional dimensions.") (license license:bsd-3))) +(define-public python-deepxde + (package + (name "python-deepxde") + (version "1.9.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "DeepXDE" version)) + (sha256 + (base32 + "0gibr0nz8xfhxwi2rgfypm653fy912n49161vqaqgpxlm2pb3bhb")))) + (build-system pyproject-build-system) + (arguments + (list #:tests? #f ; there are no tests + #:phases #~(modify-phases %standard-phases + (add-before 'sanity-check 'writable-home + ;; sanity-check writes ~/.deepxde/config.json to set + ;; the default backend. + (lambda _ + (setenv "HOME" "/tmp")))))) + ;; DeepXDE supported backends are TensorFlow (v1 and v2), PyTorch, JAX and + ;; PaddlePaddle. We test with PyTorch because we have it up to date. + (native-inputs (list python-pytorch python-setuptools-scm)) + (propagated-inputs (list python-matplotlib python-numpy + python-scikit-learn python-scikit-optimize + python-scipy)) + (home-page "https://deepxde.readthedocs.io/en/latest/") + (synopsis "Library for scientific machine learning") + (description "DeepXDE is a library for scientific machine learning and +physics-informed learning. It includes implementations for the PINN +(physics-informed neural networks), DeepONet (deep operator network) and +MFNN (multifidelity neural network) algorithms.") + (license license:lgpl2.1))) + ;; There have been no proper releases yet. (define-public kaldi (let ((commit "be22248e3a166d9ec52c78dac945f471e7c3a8aa") base-commit: 41e8726c8924e9f5b79a9f44fad94ab5586bfc50 -- 2.34.1 From unknown Tue Jun 24 05:14:28 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#64289] [PATCH] gnu: Add python-deepxde. Resent-From: Ludovic =?UTF-8?Q?Court=C3=A8s?= Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Tue, 18 Jul 2023 11:43:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 64289 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: Vinicius Monego Cc: 64289@debbugs.gnu.org Received: via spool by 64289-submit@debbugs.gnu.org id=B64289.16896805514097 (code B ref 64289); Tue, 18 Jul 2023 11:43:01 +0000 Received: (at 64289) by debbugs.gnu.org; 18 Jul 2023 11:42:31 +0000 Received: from localhost ([127.0.0.1]:51774 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qLj66-000141-VW for submit@debbugs.gnu.org; Tue, 18 Jul 2023 07:42:31 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:54408) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qLj64-00013j-H7 for 64289@debbugs.gnu.org; Tue, 18 Jul 2023 07:42:29 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qLj5y-0004WP-UQ; Tue, 18 Jul 2023 07:42:23 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:In-Reply-To:Date:References:Subject:To: From; bh=NDSTU3zcokYnXeup3fnid2GqBcFcBOyWGMauIVU5vK4=; b=eFXun3TkPReEiPCB2aQ3 lceer23sCwrCarv7V00jyu0WpcPOl1k9CY5ylYzpD3WRXMerbUGu8d7eNrpNqJJ13LgphD0cCMeZf 06QVImP+CSzUF1I7XfRvUAkqy0yJEMY8S8UIan5hfK8Giae/WdnYAtMdZaV5ferZ68c45szhk5xci WJNlpsVJoUsj4WFe0o649Q55FEUhGCq7X6KaEzNwe/32fqTdoeqzV1eDO2L1fPZYNOX0rQOdbjcD1 CChaL2PvFLw+XvVek5KF74HtXjwovbBUAz5JoH+qPuloKDViwKrbdeatfMvpS8b58c6qMpelJEOpe 7ZRYKqI/Vt0tmQ==; Received: from [2001:660:6102:320:e120:2c8f:8909:cdfe] (helo=ribbon) by fencepost.gnu.org with esmtpsa (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qLj5y-0005vD-6M; Tue, 18 Jul 2023 07:42:22 -0400 From: Ludovic =?UTF-8?Q?Court=C3=A8s?= References: <20230625222916.82599-1-monego@posteo.net> Date: Tue, 18 Jul 2023 13:42:20 +0200 In-Reply-To: <20230625222916.82599-1-monego@posteo.net> (Vinicius Monego's message of "Sun, 25 Jun 2023 22:29:16 +0000") Message-ID: <87ilahla3n.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/28.2 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Vinicius Monego skribis: > * gnu/packages/machine-learning.scm (python-deepxde): New variable. [...] > + (home-page "https://deepxde.readthedocs.io/en/latest/") > + (synopsis "Library for scientific machine learning") > + (description "DeepXDE is a library for scientific machine learning a= nd > +physics-informed learning. It includes implementations for the PINN > +(physics-informed neural networks), DeepONet (deep operator network) and > +MFNN (multifidelity neural network) algorithms.") > + (license license:lgpl2.1))) Since source file headers don=E2=80=99t say anything, that=E2=80=99s =E2=80= =98lgpl2.1+=E2=80=99. Otherwise LGTM, thanks! From unknown Tue Jun 24 05:14:28 2025 MIME-Version: 1.0 X-Mailer: MIME-tools 5.505 (Entity 5.505) X-Loop: help-debbugs@gnu.org From: help-debbugs@gnu.org (GNU bug Tracking System) To: Vinicius Monego Subject: bug#64289: closed (Re: bug#64289: [PATCH] gnu: Add python-deepxde.) Message-ID: References: <798478da2fcba2b3340f1b5f2b255489f02c2a6a.camel@posteo.net> <20230625222916.82599-1-monego@posteo.net> X-Gnu-PR-Message: they-closed 64289 X-Gnu-PR-Package: guix-patches X-Gnu-PR-Keywords: patch Reply-To: 64289@debbugs.gnu.org Date: Sat, 29 Jul 2023 18:43:02 +0000 Content-Type: multipart/mixed; boundary="----------=_1690656182-31168-1" This is a multi-part message in MIME format... ------------=_1690656182-31168-1 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable Content-Type: text/plain; charset="utf-8" Your bug report #64289: [PATCH] gnu: Add python-deepxde. which was filed against the guix-patches package, has been closed. The explanation is attached below, along with your original report. If you require more details, please reply to 64289@debbugs.gnu.org. --=20 64289: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D64289 GNU Bug Tracking System Contact help-debbugs@gnu.org with problems ------------=_1690656182-31168-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at 64289-done) by debbugs.gnu.org; 29 Jul 2023 18:42:28 +0000 Received: from localhost ([127.0.0.1]:48989 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qPotY-00085x-GI for submit@debbugs.gnu.org; Sat, 29 Jul 2023 14:42:28 -0400 Received: from mout02.posteo.de ([185.67.36.66]:54041) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qPotW-00085k-Fn for 64289-done@debbugs.gnu.org; Sat, 29 Jul 2023 14:42:27 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 240A1240101 for <64289-done@debbugs.gnu.org>; Sat, 29 Jul 2023 20:42:20 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1690656140; bh=l9EKZFrAIpKbuXjE/YbwsRIeLx6DTfLrWdLFjP8rnIk=; h=Message-ID:Subject:From:To:Cc:Date:Content-Transfer-Encoding: MIME-Version:From; b=VeXvppRHprYFVk1ZTYwyX/ZFPg2K5hlwb9rMi2g8Qh0jDmZCLfPfR2PhgKHRlUWvD vVwEowq2aJvCsM54Uyj8ThedvDEOq6nHgHIUwn5V1HPoJvtw7i3c0iKB8V3w7kPE4X 2KjosrOdn9lRRZFFBNHsBUW7vAEuh07qXU5HQiuKUwxyBTVub3y3T1H6N1B0EMwojF e+tFWRoTvBup3Oj2MCL4kj2XanfS5atTmSMe4ACILTr8Id2qUhp+rtsW7iM00OgMd1 mIzk3fEsGCfUweqSvm98Tya6MyEY55jlzA2WFI3MJ1Q24zo1E6unxcS7+J9ho7iS5O DaEhRaVdjUKHw== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4RCtf21lqQz9rxQ; Sat, 29 Jul 2023 20:42:17 +0200 (CEST) Message-ID: <798478da2fcba2b3340f1b5f2b255489f02c2a6a.camel@posteo.net> Subject: Re: bug#64289: [PATCH] gnu: Add python-deepxde. From: Vinicius Monego To: Ludovic =?ISO-8859-1?Q?Court=E8s?= Date: Sat, 29 Jul 2023 18:42:09 +0000 In-Reply-To: <87ilahla3n.fsf@gnu.org> References: <20230625222916.82599-1-monego@posteo.net> <87ilahla3n.fsf@gnu.org> Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 64289-done Cc: 64289-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Em ter, 2023-07-18 =C3=A0s 13:42 +0200, Ludovic Court=C3=A8s escreveu: >=20 > > * gnu/packages/machine-learning.scm (python-deepxde): New variable. >=20 > [...] >=20 > Since source file headers don=E2=80=99t say anything, that=E2=80=99s =E2= =80=98lgpl2.1+=E2=80=99. >=20 > Otherwise LGTM, thanks! Applied with this change, thanks. ------------=_1690656182-31168-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at submit) by debbugs.gnu.org; 25 Jun 2023 22:29:48 +0000 Received: from localhost ([127.0.0.1]:43930 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qDYEt-0000T3-Hr for submit@debbugs.gnu.org; Sun, 25 Jun 2023 18:29:47 -0400 Received: from lists.gnu.org ([209.51.188.17]:55252) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qDYEr-0000Sv-74 for submit@debbugs.gnu.org; Sun, 25 Jun 2023 18:29:46 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qDYEr-0000VU-1C for guix-patches@gnu.org; Sun, 25 Jun 2023 18:29:45 -0400 Received: from mout02.posteo.de ([185.67.36.66]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qDYEo-0001yx-Se for guix-patches@gnu.org; Sun, 25 Jun 2023 18:29:44 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id DC966240101 for ; Mon, 26 Jun 2023 00:29:40 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1687732180; bh=3ZaWT46EQ9ZyOFcxQ/Zyv4ZQsDgEY7nb5+GdC+ZBj6A=; h=From:To:Cc:Subject:Date:Message-Id:MIME-Version: Content-Transfer-Encoding:From; b=jrswRwT4DNiGKtGwAt1A8WlRlOwBay4paBIrhgQ94u7iukwSK3oV5KoTTkMfoAh7c IJJckwl5lKZXLkRxKFxLkwbDWiQrEKR51IEr7tciQBSPXvnJxuDYegyG0QfQPxTeUf 7Bx/qivKkntbPE6pF2rB5e7t3CCggcHI9/KIG6gT99z7Oo1XKuyxpjchoFz3sXnRTx 9LIbpDnujF5VE+m27Z7ejSWtt2ZGW/xMFePw57OYIX2Rl3IWBS87Vd4sSKGTS6dqiy 0xlXMVfxm1KLQCAtqvFAXgErOkYRDO3SXbetxTbT8Em9H0JrWn8aD3MDrTQjEqfDAf UWNLGmLjFppKw== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4Qq5J3046fz9rxG; Mon, 26 Jun 2023 00:29:38 +0200 (CEST) From: Vinicius Monego To: guix-patches@gnu.org Subject: [PATCH] gnu: Add python-deepxde. Date: Sun, 25 Jun 2023 22:29:16 +0000 Message-Id: <20230625222916.82599-1-monego@posteo.net> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Received-SPF: pass client-ip=185.67.36.66; envelope-from=monego@posteo.net; helo=mout02.posteo.de X-Spam_score_int: -53 X-Spam_score: -5.4 X-Spam_bar: ----- X-Spam_report: (-5.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, RCVD_IN_MSPIKE_H5=-1, RCVD_IN_MSPIKE_WL=-0.01, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.3 (-) X-Debbugs-Envelope-To: submit Cc: Vinicius Monego X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) * gnu/packages/machine-learning.scm (python-deepxde): New variable. --- gnu/packages/machine-learning.scm | 33 +++++++++++++++++++++++++++++++ 1 file changed, 33 insertions(+) diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 8fbb0274d4..ddb773b8ce 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -1936,6 +1936,39 @@ (define-public python-hyperopt discrete, and conditional dimensions.") (license license:bsd-3))) +(define-public python-deepxde + (package + (name "python-deepxde") + (version "1.9.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "DeepXDE" version)) + (sha256 + (base32 + "0gibr0nz8xfhxwi2rgfypm653fy912n49161vqaqgpxlm2pb3bhb")))) + (build-system pyproject-build-system) + (arguments + (list #:tests? #f ; there are no tests + #:phases #~(modify-phases %standard-phases + (add-before 'sanity-check 'writable-home + ;; sanity-check writes ~/.deepxde/config.json to set + ;; the default backend. + (lambda _ + (setenv "HOME" "/tmp")))))) + ;; DeepXDE supported backends are TensorFlow (v1 and v2), PyTorch, JAX and + ;; PaddlePaddle. We test with PyTorch because we have it up to date. + (native-inputs (list python-pytorch python-setuptools-scm)) + (propagated-inputs (list python-matplotlib python-numpy + python-scikit-learn python-scikit-optimize + python-scipy)) + (home-page "https://deepxde.readthedocs.io/en/latest/") + (synopsis "Library for scientific machine learning") + (description "DeepXDE is a library for scientific machine learning and +physics-informed learning. It includes implementations for the PINN +(physics-informed neural networks), DeepONet (deep operator network) and +MFNN (multifidelity neural network) algorithms.") + (license license:lgpl2.1))) + ;; There have been no proper releases yet. (define-public kaldi (let ((commit "be22248e3a166d9ec52c78dac945f471e7c3a8aa") base-commit: 41e8726c8924e9f5b79a9f44fad94ab5586bfc50 -- 2.34.1 ------------=_1690656182-31168-1--