GNU bug report logs - #62428
gnu: Add r-anota2seq, r-hybridmtest, r-apalyzer, r-org-sc-sgd-db, r-apcomplex, r-mdqc, , r-parody, r-arraymvout, r-arrayquality, r-beaddatapackr, r-beadarray, r-arrayqualitymetrics, r-repmis, r-setrng..

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From: Mădălin Ionel Patrașcu
 <madalinionel.patrascu <at> mdc-berlin.de>
To: <62428 <at> debbugs.gnu.org.>
Subject: [bug#62428] [PATCH 05/14] gnu: Add r-org-sc-sgd-db.
Date: Sat, 25 Mar 2023 00:18:51 +0100

* gnu/packages/bioconductor.scm (r-org-sc-sgd-db): New variable.
---
 gnu/packages/bioconductor.scm | 21 +++++++++++++++++++++
 1 file changed, 21 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3ae0dba919..21aa3476c0 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -116,6 +116,27 @@ (define-public r-org-bt-eg-db
 based on mapping using Entrez Gene identifiers.")
     (license license:artistic2.0)))
 
+(define-public r-org-sc-sgd-db
+  (package
+    (name "r-org-sc-sgd-db")
+    (version "3.16.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "org.Sc.sgd.db" version
+                              'annotation))
+       (sha256
+       (base32 "03b8m4p865kzhjj8zyhmc0ic0n4jyjdl4h8a8xny10b7xs6l0v9f"))))
+    (properties `((upstream-name . "org.Sc.sgd.db")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-annotationdbi))
+    (home-page "https://bioconductor.org/packages/org.Sc.sgd.db")
+    (synopsis "Genome wide annotation for Yeast")
+    (description
+     "Genome wide annotation for Yeast, primarily based on mapping using ORF
+identifiers from @acronym{SGD, Saccharomyces Genome Database}.")
+    (license license:artistic2.0)))
+
 (define-public r-pd-mapping50k-xba240
   (package
     (name "r-pd-mapping50k-xba240")
-- 
2.39.2

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