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[18.222.227.113]) by smtp.gmail.com with ESMTPSA id n18-20020a6b5912000000b00758a2325953sm518275iob.17.2023.03.22.06.55.16 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 22 Mar 2023 06:55:16 -0700 (PDT) From: Greg Hogan To: guix-patches@gnu.org Subject: [staging PATCH 0/4] Update hdf5. Date: Wed, 22 Mar 2023 13:55:14 +0000 Message-Id: <20230322135514.169558-1-code@greghogan.com> X-Mailer: git-send-email 2.40.0 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Received-SPF: none client-ip=2607:f8b0:4864:20::d2a; envelope-from=code@greghogan.com; helo=mail-io1-xd2a.google.com X-Spam_score_int: -18 X-Spam_score: -1.9 X-Spam_bar: - X-Spam_report: (-1.9 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_NONE=0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: submit Cc: Greg Hogan X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Greg Hogan (4): gnu: hdf5@1.8: Update to 1.8.23. gnu: hdf5@1.10: Update to 1.10.9. gnu: hdf5@1.12: Update to 1.12.2. gnu: Add hdf5@1.14. gnu/packages/maths.scm | 32 ++++++++++++++++++++++++++------ 1 file changed, 26 insertions(+), 6 deletions(-) -- 2.40.0 From debbugs-submit-bounces@debbugs.gnu.org Wed Mar 22 09:57:21 2023 Received: (at 62380) by debbugs.gnu.org; 22 Mar 2023 13:57:21 +0000 Received: from localhost ([127.0.0.1]:36199 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peyxs-0007dL-UJ for submit@debbugs.gnu.org; Wed, 22 Mar 2023 09:57:21 -0400 Received: from mail-io1-f46.google.com ([209.85.166.46]:37747) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peyxq-0007cv-T8 for 62380@debbugs.gnu.org; Wed, 22 Mar 2023 09:57:19 -0400 Received: by mail-io1-f46.google.com with SMTP id m22so8480584ioy.4 for <62380@debbugs.gnu.org>; Wed, 22 Mar 2023 06:57:18 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=greghogan-com.20210112.gappssmtp.com; s=20210112; t=1679493433; h=content-transfer-encoding:mime-version:message-id:date:subject:cc :to:from:from:to:cc:subject:date:message-id:reply-to; bh=nizVTmVu7jdRLXYxZvgSotvIo+v4RA3swK9ezS6gasQ=; b=2d/byYgQ1UBk6Z6eb4s1lbF3+ivT0/m4sBgl6gTI0fz194X7Jf2bMMeWCUa5sblasy vvbEQUTduztvkkS3YP+XigA7uvvrE/pyA/Ljz/iUi8WfuV8MkMrQ9dqYyVffhQ/B5gFc JwjdFdUmMxLXyV7hgdgVIVqPzb524r9/6hbAYrg1vnsSFhsVvHxNxeZ3CZecI4tEKvbg o6ZFvBEpqpLP4M2GTOhlWFDcfTxT963iZUy7otIvBzU1ZHT/vSxWLRK9wpIqOZGUpe6F 2/21Exh3NV161Y31AH9mrNCnuVpx67MDePL0dRR35N1j8AT7FAKuE51qLhok6fcRYlEP HGWw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; t=1679493433; h=content-transfer-encoding:mime-version:message-id:date:subject:cc :to:from:x-gm-message-state:from:to:cc:subject:date:message-id :reply-to; bh=nizVTmVu7jdRLXYxZvgSotvIo+v4RA3swK9ezS6gasQ=; b=6NgX/aPLLT1Dg3s0CLRXZ7zo1PKbQTAxCTtg49BY9Td9wpuanRIwAuObWrKb6uEzMK KpHvHA9zVleToZhNlgbE24J1dUu9O/LJBh2iuKyI0X7mKUNzuWB0LAI5X57ubP+qdwYG y4y8eUB04Joxgcl9gmJWrQiXrqpvnJxWmzK9SaA6A/HokwoGlgn4IOrO/Q0v9910SYEi zwzsxkya2xDOM27WPtXYilLhrWgMTfuBNgSbVQlSI6HalpxBz4d/RAORjB3xrNrCsCiW /E3RqJP3D8icf1YvuVhrL3GAzocMlRnqdB6uVZDhhgsiN2QJvv296n2XvAHczsQ8huVj Js8A== X-Gm-Message-State: AO0yUKVq6dNxJxj/fRL7672GkvUYWay1/3P1c+b1I4xeglIqyy4t47xv A/qsITaMH99f1D7b0P6LLhD09faHr1cLZnsOyJI= X-Google-Smtp-Source: AK7set+e0YGui27IN6x3ozETr+mz0dfUamVOjsa6CigMiL89BdWwgasKZcoqWK5F3r/o64ZqiAkt8w== X-Received: by 2002:a5e:8f4a:0:b0:74c:b069:f38c with SMTP id x10-20020a5e8f4a000000b0074cb069f38cmr4252422iop.1.1679493433025; Wed, 22 Mar 2023 06:57:13 -0700 (PDT) Received: from ip-172-31-24-233.us-east-2.compute.internal (ec2-18-222-227-113.us-east-2.compute.amazonaws.com. [18.222.227.113]) by smtp.gmail.com with ESMTPSA id n20-20020a02a194000000b004046f72271esm5156076jah.100.2023.03.22.06.57.12 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 22 Mar 2023 06:57:12 -0700 (PDT) From: Greg Hogan To: 62380@debbugs.gnu.org Subject: [staging PATCH 1/4] gnu: hdf5@1.8: Update to 1.8.23. Date: Wed, 22 Mar 2023 13:57:08 +0000 Message-Id: <20230322135711.181552-1-code@greghogan.com> X-Mailer: git-send-email 2.40.0 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 62380 Cc: Greg Hogan X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/maths.scm (hdf5-1.8): Update to 1.8.23. --- gnu/packages/maths.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 1492753223..512a9d7be2 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -1389,7 +1389,7 @@ (define-public hdf4-alt (define-public hdf5-1.8 (package (name "hdf5") - (version "1.8.22") + (version "1.8.23") (source (origin (method url-fetch) @@ -1404,7 +1404,7 @@ (define-public hdf5-1.8 (string-append major minor))) "/src/hdf5-" version ".tar.bz2"))) (sha256 - (base32 "194ki2s5jrgl4czkvy5nc9nwjyapah0fj72l0gb0aysplp38i6v8")) + (base32 "0km65mr6dgk4ia2dqr1b9dzw9qg15j5z35ymbys9cnny51z1zb39")) (patches (search-patches "hdf5-config-date.patch")))) (build-system gnu-build-system) (inputs -- 2.40.0 From debbugs-submit-bounces@debbugs.gnu.org Wed Mar 22 09:57:21 2023 Received: (at 62380) by debbugs.gnu.org; 22 Mar 2023 13:57:21 +0000 Received: from localhost ([127.0.0.1]:36201 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peyxt-0007dS-9h for submit@debbugs.gnu.org; Wed, 22 Mar 2023 09:57:21 -0400 Received: from mail-io1-f45.google.com ([209.85.166.45]:39638) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peyxr-0007cx-F2 for 62380@debbugs.gnu.org; Wed, 22 Mar 2023 09:57:20 -0400 Received: by mail-io1-f45.google.com with SMTP id o12so8470674iow.6 for <62380@debbugs.gnu.org>; Wed, 22 Mar 2023 06:57:19 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=greghogan-com.20210112.gappssmtp.com; s=20210112; t=1679493433; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:from:to:cc:subject:date :message-id:reply-to; bh=LtXPcVRwt8upqRmPLaQMhuGnNMUZ/jBe3jn+RvF0RXA=; b=l4fQ1YL4M9e9/+Gik37e51nS7rL/qzHJZxe6rRdLFy9XJbH4P/s8GsdNjRPHt4WbP+ PmTisnyrcceAvtmeJImGKJ5+SW/a3YAuy9dFBVW1E70NRFrviixB7AW1Wb55nplg259e qt5TRZnoUy5svY+TWPhPkFx88GnJBALsBJkJbsxUzEkzGPNaGxBmxQJNoNmXigSI5Dn9 6pLSCM4gNaTuJr5wL7u3TmP2VYjZo+LAPyU4uZIQ5BBxCSDS3y9Ohs6BjgO+akzZp84Z aRiL7wLCsLEm4Od2hUhfkfoEY0rcaHoJ8ReMctdo4c93tsO5C3McFCuB1aLw5TP3bsib KwYg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; t=1679493433; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:x-gm-message-state:from:to:cc :subject:date:message-id:reply-to; bh=LtXPcVRwt8upqRmPLaQMhuGnNMUZ/jBe3jn+RvF0RXA=; b=TsWwu6eCtLPUYLgkybMhgUebYIsIfI7uQz3aL9aOL0OeN3DHTaH9v0dUUueby5/2Qh pPIfYuUwicVFrB1jcH22/TtQRu8CHUH1krjg5jeHi9CD0+UZY3/d98WD5TiC/VdAH6dW xd8DI1GgoJY48Apz54W010UhImdCpPGGzsLOFhgAJZ2w1DJUEQpPTKHDkdjWwnt1ip/I jJTGrsT39V6ri26ujhBkQeZi/xUgvREo5yNW+SqWFsa2gdbtKPFJwpe9GWowLGks8Wc3 72n1jbgsep8vK6YoJaeOPKkcLLrCOlJTFkfEMPpi8S3ooFMEQinGZWZ80hV4Zj3vEMOq UzMA== X-Gm-Message-State: AO0yUKWiDQHeI300lwoBN4ybp17bnD7y1duQcfVwRb3hOxaP5AdAI8Rr PJgMdUkj7tEvNOZWk14PbwpvRUKPNxWrLrQ3n/g= X-Google-Smtp-Source: AK7set8sxaV+UTWcl9esQbbZQaVANnqfuZ727oxcAEnIhDWtFYQlrWkqhGAcnmCK/5KYQGL6RJKPMQ== X-Received: by 2002:a6b:f707:0:b0:745:e67e:9ec with SMTP id k7-20020a6bf707000000b00745e67e09ecmr4264594iog.15.1679493433689; Wed, 22 Mar 2023 06:57:13 -0700 (PDT) Received: from ip-172-31-24-233.us-east-2.compute.internal (ec2-18-222-227-113.us-east-2.compute.amazonaws.com. [18.222.227.113]) by smtp.gmail.com with ESMTPSA id n20-20020a02a194000000b004046f72271esm5156076jah.100.2023.03.22.06.57.13 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 22 Mar 2023 06:57:13 -0700 (PDT) From: Greg Hogan To: 62380@debbugs.gnu.org Subject: [staging PATCH 2/4] gnu: hdf5@1.10: Update to 1.10.9. Date: Wed, 22 Mar 2023 13:57:09 +0000 Message-Id: <20230322135711.181552-2-code@greghogan.com> X-Mailer: git-send-email 2.40.0 In-Reply-To: <20230322135711.181552-1-code@greghogan.com> References: <20230322135711.181552-1-code@greghogan.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 62380 Cc: Greg Hogan X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/maths.scm (hdf5-1.10): Update to 1.10.9. --- gnu/packages/maths.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 512a9d7be2..e6ce7ee045 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -1514,7 +1514,7 @@ (define-public hdf5-1.8 (define-public hdf5-1.10 (package (inherit hdf5-1.8) - (version "1.10.7") + (version "1.10.9") (source (origin (method url-fetch) @@ -1528,7 +1528,7 @@ (define-public hdf5-1.10 (take (string-split version #\.) 2)) "/src/hdf5-" version ".tar.bz2"))) (sha256 - (base32 "0pm5xxry55i0h7wmvc7svzdaa90rnk7h78rrjmnlkz2ygsn8y082")) + (base32 "14gih7kmjx4h3lc7pg4fwcl28hf1qqkf2x7rljpxqvzkjrqbxi00")) (patches (search-patches "hdf5-config-date.patch")))))) (define-public hdf5-1.12 -- 2.40.0 From debbugs-submit-bounces@debbugs.gnu.org Wed Mar 22 09:57:37 2023 Received: (at 62380) by debbugs.gnu.org; 22 Mar 2023 13:57:37 +0000 Received: from localhost ([127.0.0.1]:36203 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peyxu-0007dZ-In for submit@debbugs.gnu.org; Wed, 22 Mar 2023 09:57:37 -0400 Received: from mail-il1-f169.google.com ([209.85.166.169]:33433) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peyxs-0007cy-3G for 62380@debbugs.gnu.org; Wed, 22 Mar 2023 09:57:20 -0400 Received: by mail-il1-f169.google.com with SMTP id w4so9933807ilv.0 for <62380@debbugs.gnu.org>; Wed, 22 Mar 2023 06:57:20 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=greghogan-com.20210112.gappssmtp.com; s=20210112; t=1679493434; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:from:to:cc:subject:date :message-id:reply-to; bh=oO5beYiCwHRlX4Ywv7OujLDRPph3QPqQ01cMJleBJ2o=; b=zjtWWC9oMLt+RPFfOS/fH3GSfKF7FsVzYCuhAwCmLu7hF2NAwSI7FNxEmcdIjR2nWn s76IUVTJa4QWZ0KBf2l9PtVftA80pR60JGwp+oU7Rv4SlnbZCcS+ITR+sN+B02PMlww4 zzqkVStItHoMEpHx5aogvg9sp3ldrbqOH2NSrxyjsX7SX+G5gC/Aq8OuWhUK9L22cefz +5BCFEP+Zge/VKSgt8F/t2XYi6eTZxoICCE6Cq4WIyk6HoloX1RA8rgCVlKTYBfHqKEF LZbs+vvnj5OiDQSeijA57cDQVP4CzeoPmYfu6ehkEtfHJcQe5jtW4NXBxkVgs6hEoMbR /QPg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; t=1679493434; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:x-gm-message-state:from:to:cc :subject:date:message-id:reply-to; bh=oO5beYiCwHRlX4Ywv7OujLDRPph3QPqQ01cMJleBJ2o=; b=fs45k/Ymn5Benxw/08s+/f0CHl/89V8iYPv8bdxtWBEWuqbe7nuzXhbbHAsbSB+Fbr EkIHkIQjpAjO+kl2xV62tJ54Wpkg+9Xtc2ELkBRL+xi1I/OV8wc7TtF7I82gjCreryLL Ph8dLjeAJbqHkkfmrl90gWkY4+l42FTShMFi2fxnKZN06CAbVvBUb2RU0WQRrWX+2MXK /EK0l3AbPdweb6wqV7qnKWe0u/bOcmd8t1mnk/dxb+257Rn4Z+7zQCsDB15mn/8oVB6N qtiaJivTFHIRryV0TSttQge3US7m1jYevM68aijcFtOCjcIXjpnYcCqI7BKaQjMSN1QX Q/bw== X-Gm-Message-State: AO0yUKUEA71RMU+p1ZJBkpJprmzFxyZEF0CNybtpRjOLddXmDBIcTvu4 DnJVwFuOH9i2704ReNo1v275xAzWzFhougqsGbs= X-Google-Smtp-Source: AK7set+S10QA66A/15DfrfXcfWRDEeAzc9ftH2h8pU2s/2DUU7HONuyWpfLEETz2p/rXvV+lteTM1A== X-Received: by 2002:a92:d991:0:b0:323:bce:f23a with SMTP id r17-20020a92d991000000b003230bcef23amr4509544iln.16.1679493434343; Wed, 22 Mar 2023 06:57:14 -0700 (PDT) Received: from ip-172-31-24-233.us-east-2.compute.internal (ec2-18-222-227-113.us-east-2.compute.amazonaws.com. [18.222.227.113]) by smtp.gmail.com with ESMTPSA id n20-20020a02a194000000b004046f72271esm5156076jah.100.2023.03.22.06.57.13 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 22 Mar 2023 06:57:14 -0700 (PDT) From: Greg Hogan To: 62380@debbugs.gnu.org Subject: [staging PATCH 3/4] gnu: hdf5@1.12: Update to 1.12.2. Date: Wed, 22 Mar 2023 13:57:10 +0000 Message-Id: <20230322135711.181552-3-code@greghogan.com> X-Mailer: git-send-email 2.40.0 In-Reply-To: <20230322135711.181552-1-code@greghogan.com> References: <20230322135711.181552-1-code@greghogan.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 62380 Cc: Greg Hogan X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/maths.scm (hdf5-1.12): Update to 1.12.2. --- gnu/packages/maths.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index e6ce7ee045..451a861e95 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -1534,7 +1534,7 @@ (define-public hdf5-1.10 (define-public hdf5-1.12 (package (inherit hdf5-1.8) - (version "1.12.1") + (version "1.12.2") (source (origin (method url-fetch) @@ -1548,7 +1548,7 @@ (define-public hdf5-1.12 (take (string-split version #\.) 2)) "/src/hdf5-" version ".tar.bz2"))) (sha256 - (base32 "074g3z504xf77ff38igs30i1aqxpm508p7yw78ykva7dncrgbyda")) + (base32 "1zlawdzb0gsvcxif14fwr5ap2gk4b6j02wirr2hcx8hkcbivp20s")) (patches (search-patches "hdf5-config-date.patch")))))) (define-public hdf5 -- 2.40.0 From debbugs-submit-bounces@debbugs.gnu.org Wed Mar 22 09:57:38 2023 Received: (at 62380) by debbugs.gnu.org; 22 Mar 2023 13:57:38 +0000 Received: from localhost ([127.0.0.1]:36205 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peyy9-0007e0-OA for submit@debbugs.gnu.org; Wed, 22 Mar 2023 09:57:38 -0400 Received: from mail-il1-f172.google.com ([209.85.166.172]:36406) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peyxs-0007d0-LC for 62380@debbugs.gnu.org; Wed, 22 Mar 2023 09:57:21 -0400 Received: by mail-il1-f172.google.com with SMTP id x6so1594696ile.3 for <62380@debbugs.gnu.org>; Wed, 22 Mar 2023 06:57:20 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=greghogan-com.20210112.gappssmtp.com; s=20210112; t=1679493435; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:from:to:cc:subject:date :message-id:reply-to; bh=70EbyV3v8FadgLmygufO8UNNXi0UHfSXZu+sPRRwEM8=; b=DPtPJQt1XBgtwzMX/0+ahMtB1/LjXIf1OQrL/MamRSLfvvNf7o54AUxtiX53F3chgr xdBQOFtia5BqCGrkt6lyrYzqNbbb5YVl4syFQGIYQzdj2ZjgAFgz27kNZQ0z/gr+GZE2 lOg8sAeeOXbjUfkJtgG9yfDmp/+iS7oNCDSAN5M1ZrJBGrEn71ovVJSmu5oPiGYRRDwe cbG+kF5JKBVu1PBeTcxQXqEmOrimIUan9dVZkQbttXDwKvQKytBlBl9sg/8D40l9uSOU 91m+53t3yWHpIouOhCGWcoxAcd1jnqO3JOkXMTkTkw4A3muXjSjjYHt7xk922Sr3yNCn l58w== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; t=1679493435; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:x-gm-message-state:from:to:cc :subject:date:message-id:reply-to; bh=70EbyV3v8FadgLmygufO8UNNXi0UHfSXZu+sPRRwEM8=; b=rCiZTNuGEJ4SiEjwlUIs6DP90L+UPcqAek4lqFSi5JrvS5h4dJ3g0XK0UYX1vHp9vF m6K3OeE4zsLiv1AQVAiXXS5MTKICNMhvsHord98dCTI+5pZeppGlH2YaoPgCbx2rlQNq y7pZ8uy5O3XWPlI7WSwBxEoIx/UJ88mC0r+lSuhwQbqPRX89Qm3l3K59AfDogyVxuMDW xzq3r2EAqh0vUUPjNNthlU72mmoF3I62IFvQGXslKoi/iK/mm8+jijEOA/CRpR5eIB8H dlQxRweipXn9kVxqIyuZWfamlbRRNOtiq8kahD3j1gC7YwYAffsbYnnuEvMkRjg+kG9e Grzg== X-Gm-Message-State: AO0yUKWkaloHG5zDTmoUONFJQH6sRjYCMwBg90/nOde11+6hXfQaChRS lOutvVIK3dT0vpISogmbSjHlpvQSSSZ6ga7eyio= X-Google-Smtp-Source: AK7set+nnAQez/DBioHcrKr6vaZfK122sShZIMFd4woVSAip6YekjL9icmtMTJWJmyCf1SV3h5EaSQ== X-Received: by 2002:a92:cf0f:0:b0:31f:9b6e:2f60 with SMTP id c15-20020a92cf0f000000b0031f9b6e2f60mr4180050ilo.4.1679493435073; Wed, 22 Mar 2023 06:57:15 -0700 (PDT) Received: from ip-172-31-24-233.us-east-2.compute.internal (ec2-18-222-227-113.us-east-2.compute.amazonaws.com. [18.222.227.113]) by smtp.gmail.com with ESMTPSA id n20-20020a02a194000000b004046f72271esm5156076jah.100.2023.03.22.06.57.14 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 22 Mar 2023 06:57:14 -0700 (PDT) From: Greg Hogan To: 62380@debbugs.gnu.org Subject: [staging PATCH 4/4] gnu: Add hdf5@1.14. Date: Wed, 22 Mar 2023 13:57:11 +0000 Message-Id: <20230322135711.181552-4-code@greghogan.com> X-Mailer: git-send-email 2.40.0 In-Reply-To: <20230322135711.181552-1-code@greghogan.com> References: <20230322135711.181552-1-code@greghogan.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 62380 Cc: Greg Hogan X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) * gnu/packages/maths.scm (hdf5-1.14): New variable. --- gnu/packages/maths.scm | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 451a861e95..d6d3658445 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -1551,6 +1551,26 @@ (define-public hdf5-1.12 (base32 "1zlawdzb0gsvcxif14fwr5ap2gk4b6j02wirr2hcx8hkcbivp20s")) (patches (search-patches "hdf5-config-date.patch")))))) +(define-public hdf5-1.14 + (package + (inherit hdf5-1.8) + (version "1.14.0") + (source + (origin + (method url-fetch) + (uri (list (string-append "https://support.hdfgroup.org/ftp/HDF5/releases/" + "hdf5-" (version-major+minor version) + "/hdf5-" version "/src/hdf5-" + version ".tar.bz2") + (string-append "https://support.hdfgroup.org/ftp/HDF5/" + "current" + (apply string-append + (take (string-split version #\.) 2)) + "/src/hdf5-" version ".tar.bz2"))) + (sha256 + (base32 "181bdh8hp7v9xqwcby3lknr92lxlicc2hqscba3f5nhf8lrr9rz4")) + (patches (search-patches "hdf5-config-date.patch")))))) + (define-public hdf5 ;; Default version of HDF5. hdf5-1.10) -- 2.40.0 From debbugs-submit-bounces@debbugs.gnu.org Thu Mar 30 23:27:12 2023 Received: (at 62380-done) by debbugs.gnu.org; 31 Mar 2023 03:27:12 +0000 Received: from localhost ([127.0.0.1]:59938 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pi5Pz-00066e-Qs for submit@debbugs.gnu.org; Thu, 30 Mar 2023 23:27:12 -0400 Received: from mail-qv1-f44.google.com ([209.85.219.44]:41481) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pi5Pw-00066Q-T3 for 62380-done@debbugs.gnu.org; Thu, 30 Mar 2023 23:27:10 -0400 Received: by mail-qv1-f44.google.com with SMTP id g9so15580659qvt.8 for <62380-done@debbugs.gnu.org>; Thu, 30 Mar 2023 20:27:08 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; t=1680233223; x=1682825223; h=mime-version:user-agent:message-id:in-reply-to:date:references :subject:cc:to:from:from:to:cc:subject:date:message-id:reply-to; bh=XGx5iCEWd4+M8HA8IsknaxDme3Kb62dBPbwNtywMMn4=; b=Hxd3pYzSMXSmoM4emiTo9Tf5AUoYvjYaPgVMmjERNwQsvLfMhUbBMavSCQOL9XShW9 PflCyTqpMk7SAuubveQFwyu3b9TLCpZE5XNHnJTDISfZL6XrL3vj/YrD5TEdAPZ8bs9u OQWlrLcygs3lF/UkoxdMs7eRj4ZKn+1kGQD2MlU9Cv8p+qPwDZY43mChzWPmCG+ozDM/ CwjSp7/dOOAbZSjzq1A9pr+FuLkk8T3u7cZTJ77C8yVmbveZb7UA/M0xA2LISQui4A4x Cx63svQEB6i0F3lD0C2dGSiUAQq6mZlZQoRfR3Mc2sYVWa8+le0tP88n62LW2WLupgVC 2yJQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; t=1680233223; x=1682825223; h=mime-version:user-agent:message-id:in-reply-to:date:references :subject:cc:to:from:x-gm-message-state:from:to:cc:subject:date :message-id:reply-to; bh=XGx5iCEWd4+M8HA8IsknaxDme3Kb62dBPbwNtywMMn4=; b=R8mgtZKUjjPoWFr3ChXX96tsPb9rQYU2rYJnX/Px6pg51qSe1MKn2W8e7OJqqSD0k/ bboNTSUYY/3B72BGuN3cuCMuu6etycWL3zBvSIMd/WTnXCX+xmE7N2tv/eH32UVh5y9E yHV95XE9QJfGcD+JedzSm17Nbd7ZFrAwqiL53Zwfyb4I1TXUh+m0aGVT+Af7na9imart 4rdRUiJyU9pNnKG18aNHKpmK9H4I13jU+moC2008CV4gYKQ5BLK0Z2KNG13523jdjjet M1hXFHXIcrnvJTaKEmC4wf/5HY7GhAogXi5skshvZL0BWt1cgX+Aj0sR/AA7h9ZbllVS eXhA== X-Gm-Message-State: AAQBX9dt0kvTbEhkEy0fcTqZ9IEkGhbNmv03vvk44p5kmitGpDOVQ9mp SJNG+6Rr4pzRRSMaEyPxAw3OOx4MnWEuZQ== X-Google-Smtp-Source: AKy350aNX4jyioSodYAfRfP/Knq7PdZKsld/UD0z2JrJDihH5vAIC9HtmKedBpY6ogHwOqizXFjtjA== X-Received: by 2002:a05:6214:5084:b0:5a3:2f3c:4ee2 with SMTP id kk4-20020a056214508400b005a32f3c4ee2mr35469838qvb.42.1680233222865; Thu, 30 Mar 2023 20:27:02 -0700 (PDT) Received: from hurd (dsl-10-133-241.b2b2c.ca. [72.10.133.241]) by smtp.gmail.com with ESMTPSA id me17-20020a0562145d1100b005e1f6d5722asm115787qvb.65.2023.03.30.20.27.02 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Thu, 30 Mar 2023 20:27:02 -0700 (PDT) From: Maxim Cournoyer To: Greg Hogan Subject: Re: bug#62380: [staging PATCH 0/4] Update hdf5. References: <20230322135711.181552-1-code@greghogan.com> <20230322135711.181552-4-code@greghogan.com> Date: Thu, 30 Mar 2023 23:27:01 -0400 In-Reply-To: <20230322135711.181552-4-code@greghogan.com> (Greg Hogan's message of "Wed, 22 Mar 2023 13:57:11 +0000") Message-ID: <87fs9ly516.fsf_-_@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/28.2 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 62380-done Cc: 62380-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hello, I've installed the series to staging. It seems it could have also been on the limit to go to master, so in the future feel free to submit for master. Something we should look into is hide the (false positive, I assume?) CVEs reported by guix lint: --8<---------------cut here---------------start------------->8--- gnu/packages/maths.scm:1390:2: hdf5@1.8.23: probably vulnerable to CVE-2020-10809, CVE-2020-10810, CVE-2020-10811, CVE-2020-10812 gnu/packages/maths.scm:1515:2: hdf5@1.10.9: probably vulnerable to CVE-2020-10809, CVE-2020-10810, CVE-2020-10811, CVE-2020-10812 gnu/packages/maths.scm:1535:2: hdf5@1.12.2: probably vulnerable to CVE-2021-37501 --8<---------------cut here---------------end--------------->8--- This can be done by adding lint-hidden-cve properties, with explanatory comments. -- Thanks, Maxim From unknown Sun Jun 22 11:37:26 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Fri, 28 Apr 2023 11:24:17 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator