GNU bug report logs - #61891
[PATCH] gnu: Add r-biglm, r-cplm, r-som, r-chemometrics, r-metagenomeseq, r-maaslin2, r-mmuphin.

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Ricardo Wurmus <rekado <at> elephly.net>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#61891: closed ([PATCH] gnu: Add r-biglm, r-cplm, r-som,
 r-chemometrics, r-metagenomeseq, r-maaslin2, r-mmuphin.)
Date: Thu, 02 Mar 2023 21:13:02 +0000

[Message part 1 (text/plain, inline)]

Your message dated Thu, 02 Mar 2023 22:09:30 +0100
with message-id <87356mg8nw.fsf <at> elephly.net>
and subject line Re: [bug#61891]
has caused the debbugs.gnu.org bug report #61891,
regarding [PATCH] gnu: Add r-biglm, r-cplm, r-som, r-chemometrics, r-metagenomeseq, r-maaslin2, r-mmuphin.
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs <at> gnu.org.)


-- 
61891: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=61891
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

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From: Mădălin Ionel Patrașcu
 <madalinionel.patrascu <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Subject: [PATCH] gnu: Add r-biglm, r-cplm, r-som, r-chemometrics,
 r-metagenomeseq, r-maaslin2, r-mmuphin.
Date: Wed, 1 Mar 2023 08:20:44 +0100

* gnu/packages/cran.scm (r-biglm, r-cplm, r-som, r-chemometrics): New 
variables.

* gnu/packages/bioconductor.scm (r-metagenomeseq, r-maaslin2, 
r-mmuphin): New variables.

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From: Ricardo Wurmus <rekado <at> elephly.net>
To: Mădălin Ionel Patrașcu
 <madalinionel.patrascu <at> mdc-berlin.de>
Cc: 61891-done <at> debbugs.gnu.org
Subject: Re: [bug#61891]
Date: Thu, 02 Mar 2023 22:09:30 +0100

Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de> writes:

> Date: Wed, 1 Mar 2023 11:50:40 +0100
> Subject: [PATCH] gnu: Test builds for r-maaslin and r-mmuphin.scm
>
> This is my try to make the build of these two package reproducible.
>
> I send this only in the case if the reviewer wants to dig more and maybe he can
> solve the non deterministic build.

I managed to get r-mmuphin to build reproducibly, but for r-maaslin the
problem is that the scatterplots are non-deterministic.  I’ve opened a
new bug report for that and pushed the rest of the patches.

-- 
Ricardo

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