GNU bug report logs - #61251
[PATCH 2/3] gnu: Add r-bcellviper.

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
Subject: bug#61251: closed ([PATCH 2/3] gnu: Add r-bcellviper.)
Date: Fri, 03 Feb 2023 15:50:02 +0000

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Your bug report

#61251: [PATCH 2/3] gnu: Add r-bcellviper.

which was filed against the guix-patches package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to 61251 <at> debbugs.gnu.org.

-- 
61251: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=61251
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

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From: Ricardo Wurmus <rekado <at> elephly.net>
To: 61251-done <at> debbugs.gnu.org
Subject: [PATCH 2/3] gnu: Add r-bcellviper.
Date: Fri, 03 Feb 2023 16:49:15 +0100

Applied, thanks!

-- 
Ricardo

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From: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Subject: [PATCH 2/3] gnu: Add r-bcellviper.
Date: Fri, 3 Feb 2023 13:18:53 +0100

* gnu/packages/bioconductor.scm (r-bcellviper): New variable.
---
 gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index aeef6f4106..521d6c00be 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1248,6 +1248,29 @@ (define-public r-arrmdata
 from Illumina 450k methylation arrays.")
     (license license:artistic2.0)))
 
+(define-public r-bcellviper
+  (package
+    (name "r-bcellviper")
+    (version "1.34.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "bcellViper" version
+                                     'experiment))
+              (sha256
+               (base32
+                "1fpgh70x2r68v0ximgcdphnyzq2hgiwbamyhbac3yka8flhrd1fm"))))
+    (properties `((upstream-name . "bcellViper")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-biobase))
+    (home-page "https://bioconductor.org/packages/bcellViper")
+    (synopsis
+     "Transcriptional interactome and normal human B-cell expression data")
+    (description
+     "This is a tool for human B-cell context-specific transcriptional regulatory network.
+In addition, this package provides a human normal B-cells dataset for
+the examples in package viper.")
+    (license license:gpl2+)))
+
 (define-public r-bladderbatch
   (package
     (name "r-bladderbatch")
-- 
2.34.1

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