Subject: [PATCH 0/4] Some bioinfo packages

From: Simon Tournier <[email-masked]>
Date: Tue, 17 Jan 2023 18:26:50 +0100

Hi,

Here some pacakages used in Bioinformatics.

Note that the package numbat comes with 'bin/pileup_and_phase.R' for preparing
the data, as explained in online documentation [1].

Here, this script goes under 'site-library/numbat/bin' which does not
perfectly match the online documentation mentioning 'numbat/inst/bin/'
instead.

1: https://kharchenkolab.github.io/numbat/articles/numbat.html

Cheers,
simon

Simon Tournier (4):
  gnu: Add python-vireosnp.
  gnu: Add r-scistreer.
  gnu: Add r-roptim.
  gnu: Add r-numbat.

 gnu/packages/bioconductor.scm   | 106 +++++++++++++++++++++++++++++++-
 gnu/packages/bioinformatics.scm |  22 +++++++
 gnu/packages/cran.scm           |  23 ++++++-
 3 files changed, 149 insertions(+), 2 deletions(-)

base-commit: ecda67a577570f412b103e5dd8ed1a44193a9c11
-- 
2.38.1