Subject: Re: bug#60640: Gnu: Add gdcm

From: Tor-björn Claesson <[email-masked]>
Date: Sat, 14 Jan 2023 11:30:29 +0200

Here is the first patch, which updates gdcm to 3.0.20.
>From f4cd5077a762f25a9fa271329a798f324e4db685 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Tor-bj=C3=B6rn=20Claesson?= <[email-masked]>
Date: Sat, 14 Jan 2023 11:23:58 +0200
Subject: [PATCH] gnu: gdcm: Update to 3.0.20.

---
 gnu/packages/bioinformatics.scm | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6dd2e8250c..5b886526ad 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -17842,7 +17842,7 @@ (define-public wfmash
 (define-public gdcm
   (package
     (name "gdcm")
-    (version "2.8.9")
+    (version "3.0.20")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -17852,7 +17852,7 @@ (define-public gdcm
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "1j8mjnxcwn2xvzhf25lv4dbawxbgc4im1crh8081li7i4mbwswaj"))))
+                "1w78cmm9q7aavs7svdkl4dgilcqk4yazci9m6x7icrssb7cj991i"))))
     (build-system cmake-build-system)
     (arguments
      (list
@@ -17864,7 +17864,7 @@ (define-public gdcm
                              "|TestSCUValidation"
                              "|TestEcho"
                              "|TestFind'"))))
-    (home-page "http://gdcm.sourceforge.net/wiki/index.php/Main_Page")
+    (home-page "https://gdcm.sourceforge.net/wiki/index.php/Main_Page")
     (synopsis "Grassroots DICOM library")
     (description
      "Grassroots DICOM (GDCM) is an implementation of the DICOM standard
@@ -17873,7 +17873,7 @@ (define-public gdcm
 protocol, both of which should be extended to provide a full set of tools for
 a researcher or small medical imaging vendor to interface with an existing
 medical database.")
-    (license license:bsd-2)))
+    (license license:bsd-3)))
 
 (define-public wiggletools
   (package
-- 
2.38.1

Documentation is also missing, will add this as well.
Cheers,
Tor-björn