From unknown Sun Jun 15 08:49:57 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#58776] [PATCH] Add r-seuratwrappers Resent-From: "Hong.Li@mdc-berlin.de" Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Tue, 25 Oct 2022 13:44:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 58776 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 58776@debbugs.gnu.org Cc: "rekado@elephly.net" , "Hong.Li@mdc-berlin.de" X-Debbugs-Original-To: "guix-patches@gnu.org" Received: via spool by submit@debbugs.gnu.org id=B.16667053935554 (code B ref -1); Tue, 25 Oct 2022 13:44:02 +0000 Received: (at submit) by debbugs.gnu.org; 25 Oct 2022 13:43:13 +0000 Received: from localhost ([127.0.0.1]:50736 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1onKD3-0001RW-De for submit@debbugs.gnu.org; Tue, 25 Oct 2022 09:43:13 -0400 Received: from lists.gnu.org ([209.51.188.17]:59040) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1onKCz-0001RM-72 for submit@debbugs.gnu.org; Tue, 25 Oct 2022 09:43:12 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1onKCz-0005l9-0z for guix-patches@gnu.org; Tue, 25 Oct 2022 09:43:09 -0400 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1onKCp-0005Pc-AT for guix-patches@gnu.org; Tue, 25 Oct 2022 09:43:08 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= mime-version:content-type:content-type:content-language :accept-language:message-id:date:date:subject:subject:from:from :received:received; s=mdc; t=1666705359; x=1668519760; bh=o2ZYsQ WU+0wqNVB5egiyKwX+XfHxQrFpFKox/kvjjgo=; b=ahScVJRdszdZQZlvvDZUSg kZLBjs2Tr2nNAIdkFTOLAOEdnZB1tV/udC2tys3BW7QKAZQIFMApQY9+6oX1Bl0A 2w02/Pk5gGmE9JGkcWjsM+WRJKcn3NyZLK4a26oBuCzAUwL6mi5ESdqDnD9DokcW nFC+/sUQEE5cJtGKzSvmg= Received: from SW-IT-P-EX2.mdc-berlin.net (mgw2.mdc-berlin.de [141.80.113.60]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id 1B472A0311; Tue, 25 Oct 2022 15:42:36 +0200 (CEST) Received: from SW-IT-P-EX1.mdc-berlin.net (141.80.113.54) by SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.13; Tue, 25 Oct 2022 15:42:36 +0200 Received: from SW-IT-P-EX1.mdc-berlin.net ([fe80::b00d:dcd5:bd6c:2cbe]) by SW-IT-P-EX1.mdc-berlin.net ([fe80::b00d:dcd5:bd6c:2cbe%10]) with mapi id 15.01.2507.013; Tue, 25 Oct 2022 15:42:36 +0200 From: "Hong.Li@mdc-berlin.de" Thread-Topic: [PATCH] Add r-seuratwrappers Thread-Index: AQHY6Hd1iVn8kVHAZkC8QFNwN/yDZQ== Date: Tue, 25 Oct 2022 13:42:36 +0000 Message-ID: <99913d78ac894e09979cbfe945140a3e@mdc-berlin.de> Accept-Language: en-GB, de-DE, en-US Content-Language: en-GB X-MS-Has-Attach: yes X-MS-TNEF-Correlator: x-originating-ip: [141.80.113.51] x-tm-as-product-ver: SMEX-14.0.0.3092-9.0.1002-27222.007 x-tm-as-result: No-10--8.116400-5.000000 x-tmase-matchedrid: ZAkTtSyZ7B6fkHSWeTTytMG0UNgaZpYqGsvgUMYAn4UWzPTbxO7R+tIS YzBUt2RaXVsEWVqYqaivJcrLMYkA70UuXkWTSi/R30kDaWZBE1RU4sxFq6igEUqa6TyhyXvPtAg K4TtXrP1GUsVNd0mL6QC2F/gPANDtCdtCev19Y1JJcjGePBisFBZSD+Gbjz3ItsxVqq1TeAUODi qKZI688swl0ZxGPf0mHcN4x+ltYL008llWm5zjSnOYpxZcqXqqFlb8DO2jtCzsWjO/lPD2Sf7E6 GNqs6cezseycmSI1Te1T5sssLK07EAWCg/MUFqicxYeVrfi/UIbv2rDg5PSOnbUHR0PvGxXRNNV YT6ZrwmGLtxTwzSoD37cGd19dSFd x-tm-as-user-approved-sender: Yes x-tm-as-user-blocked-sender: No x-tmase-result: 10--8.116400-5.000000 x-tmase-version: SMEX-14.0.0.3092-9.0.1002-27222.007 x-tm-snts-smtp: DB311AB15CEADD8DF70CC19B939024C542DCE0845DDDB304592991CA9196E1902002:F Content-Type: multipart/mixed; boundary="_004_99913d78ac894e09979cbfe945140a3emdcberlinde_" MIME-Version: 1.0 Received-SPF: pass client-ip=194.95.232.172; envelope-from=Hong.Li@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, HTML_MESSAGE=0.001, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) --_004_99913d78ac894e09979cbfe945140a3emdcberlinde_ Content-Type: multipart/alternative; boundary="_000_99913d78ac894e09979cbfe945140a3emdcberlinde_" --_000_99913d78ac894e09979cbfe945140a3emdcberlinde_ Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable -- HPC Team / IT Dept. Max Delbr=FCck Center Tel: +49-(0)30-9406-2612 Hong.Li@mdc-berlin.de --_000_99913d78ac894e09979cbfe945140a3emdcberlinde_ Content-Type: text/html; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable 



--
HPC Team / IT Dept.
Max D=
elbr=FCck Center
Tel: +49-(0)30-9406-2612
Hong.Li@=
mdc-berlin.de
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The explanation is attached below, along with your original report. If you require more details, please reply to 58776@debbugs.gnu.org. --=20 58776: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D58776 GNU Bug Tracking System Contact help-debbugs@gnu.org with problems ------------=_1666876262-8397-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at 58776-done) by debbugs.gnu.org; 27 Oct 2022 13:10:08 +0000 Received: from localhost ([127.0.0.1]:56396 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oo2e7-00029t-Sw for submit@debbugs.gnu.org; Thu, 27 Oct 2022 09:10:08 -0400 Received: from sender4-of-o51.zoho.com ([136.143.188.51]:21108) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oo2e5-00029j-Qb for 58776-done@debbugs.gnu.org; Thu, 27 Oct 2022 09:10:07 -0400 ARC-Seal: i=1; a=rsa-sha256; t=1666876202; cv=none; d=zohomail.com; s=zohoarc; b=WheeiPAmGFc/nsIMGOtsBEzvsC/NR2NRAQR3jdqGYG+lS1zfGGu4V5nJinPe41ZZ+3MhNTE/6awz0CXgM2eU0vjoyUt8rgzD+azzLvfpVK/qHaAzebn1YwPDwikbw4YaQSwFFGdXq86DjUpqEGCmTtaI/9H7lGpI0o3s9U1qUTA= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1666876202; h=Content-Type:Content-Transfer-Encoding:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To; bh=9+vGbp/MfGmcuZJA9KHdary14GHzXB5OFcr6Oa62wa4=; b=k+f2Z1MFSCgM5xnEl5rOFiAhyb+06h60WdewVOrkisoR8AVeubgXl+jlVOZbaDvc7uPInirbDjiUnsciFR2E8Pypy5fNd1NO67BN+j4bASfLZjMNS4ke27UBbYZhJL9MCHKI9bBC3ixsafUmdGgNtG0ESMwTUQuP23j7YT0FIXY= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1666876202; s=zoho; d=elephly.net; i=rekado@elephly.net; h=References:From:From:To:To:Cc:Cc:Subject:Subject:Date:Date:In-reply-to:Message-ID:MIME-Version:Content-Type:Content-Transfer-Encoding:Message-Id:Reply-To; bh=9+vGbp/MfGmcuZJA9KHdary14GHzXB5OFcr6Oa62wa4=; b=ZQ4nf9fbKxmdw4Dw0d7QDNYcmdUHh0eUyV6r7RFTDGSGrHZakxhOoYxT38Oxr6a4 iWHtRmPS8AVmK8x0Z2Xf5CeHNMxejY6nOubeMjGD9fDLXV25Dsp9oy5iuqjJaIdqFIK DthrVZr2q4/lGORJIxYhnvMDGmpAYBJmtXpyn5Jk= Received: from localhost (151-110-142-46.pool.kielnet.net [46.142.110.151]) by mx.zohomail.com with SMTPS id 1666876200916438.0795814495932; Thu, 27 Oct 2022 06:10:00 -0700 (PDT) References: <99913d78ac894e09979cbfe945140a3e@mdc-berlin.de> User-agent: mu4e 1.8.9; emacs 28.1 From: Ricardo Wurmus To: "Hong.Li@mdc-berlin.de" Subject: Re: [PATCH] Add r-seuratwrappers Date: Thu, 27 Oct 2022 15:09:04 +0200 In-reply-to: <99913d78ac894e09979cbfe945140a3e@mdc-berlin.de> X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Message-ID: <87k04lifa2.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-ZohoMailClient: External X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 58776-done Cc: 58776-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) I applied it, but it didn=E2=80=99t build. I had to upgrade r-seurat and r-seuratobject, and add r-r-utils to the inputs. I also moved the package from cran.scm to bioinformatics.scm. Thanks! --=20 Ricardo ------------=_1666876262-8397-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at submit) by debbugs.gnu.org; 25 Oct 2022 13:43:13 +0000 Received: from localhost ([127.0.0.1]:50736 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1onKD3-0001RW-De for submit@debbugs.gnu.org; Tue, 25 Oct 2022 09:43:13 -0400 Received: from lists.gnu.org ([209.51.188.17]:59040) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1onKCz-0001RM-72 for submit@debbugs.gnu.org; Tue, 25 Oct 2022 09:43:12 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1onKCz-0005l9-0z for guix-patches@gnu.org; Tue, 25 Oct 2022 09:43:09 -0400 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1onKCp-0005Pc-AT for guix-patches@gnu.org; Tue, 25 Oct 2022 09:43:08 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= mime-version:content-type:content-type:content-language :accept-language:message-id:date:date:subject:subject:from:from :received:received; s=mdc; t=1666705359; x=1668519760; bh=o2ZYsQ WU+0wqNVB5egiyKwX+XfHxQrFpFKox/kvjjgo=; b=ahScVJRdszdZQZlvvDZUSg kZLBjs2Tr2nNAIdkFTOLAOEdnZB1tV/udC2tys3BW7QKAZQIFMApQY9+6oX1Bl0A 2w02/Pk5gGmE9JGkcWjsM+WRJKcn3NyZLK4a26oBuCzAUwL6mi5ESdqDnD9DokcW nFC+/sUQEE5cJtGKzSvmg= Received: from SW-IT-P-EX2.mdc-berlin.net (mgw2.mdc-berlin.de [141.80.113.60]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id 1B472A0311; Tue, 25 Oct 2022 15:42:36 +0200 (CEST) Received: from SW-IT-P-EX1.mdc-berlin.net (141.80.113.54) by SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.13; Tue, 25 Oct 2022 15:42:36 +0200 Received: from SW-IT-P-EX1.mdc-berlin.net ([fe80::b00d:dcd5:bd6c:2cbe]) by SW-IT-P-EX1.mdc-berlin.net ([fe80::b00d:dcd5:bd6c:2cbe%10]) with mapi id 15.01.2507.013; Tue, 25 Oct 2022 15:42:36 +0200 From: "Hong.Li@mdc-berlin.de" To: "guix-patches@gnu.org" Subject: [PATCH] Add r-seuratwrappers Thread-Topic: [PATCH] Add r-seuratwrappers Thread-Index: AQHY6Hd1iVn8kVHAZkC8QFNwN/yDZQ== Date: Tue, 25 Oct 2022 13:42:36 +0000 Message-ID: <99913d78ac894e09979cbfe945140a3e@mdc-berlin.de> Accept-Language: en-GB, de-DE, en-US Content-Language: en-GB X-MS-Has-Attach: yes X-MS-TNEF-Correlator: x-originating-ip: [141.80.113.51] x-tm-as-product-ver: SMEX-14.0.0.3092-9.0.1002-27222.007 x-tm-as-result: No-10--8.116400-5.000000 x-tmase-matchedrid: ZAkTtSyZ7B6fkHSWeTTytMG0UNgaZpYqGsvgUMYAn4UWzPTbxO7R+tIS YzBUt2RaXVsEWVqYqaivJcrLMYkA70UuXkWTSi/R30kDaWZBE1RU4sxFq6igEUqa6TyhyXvPtAg K4TtXrP1GUsVNd0mL6QC2F/gPANDtCdtCev19Y1JJcjGePBisFBZSD+Gbjz3ItsxVqq1TeAUODi qKZI688swl0ZxGPf0mHcN4x+ltYL008llWm5zjSnOYpxZcqXqqFlb8DO2jtCzsWjO/lPD2Sf7E6 GNqs6cezseycmSI1Te1T5sssLK07EAWCg/MUFqicxYeVrfi/UIbv2rDg5PSOnbUHR0PvGxXRNNV YT6ZrwmGLtxTwzSoD37cGd19dSFd x-tm-as-user-approved-sender: Yes x-tm-as-user-blocked-sender: No x-tmase-result: 10--8.116400-5.000000 x-tmase-version: SMEX-14.0.0.3092-9.0.1002-27222.007 x-tm-snts-smtp: DB311AB15CEADD8DF70CC19B939024C542DCE0845DDDB304592991CA9196E1902002:F Content-Type: multipart/mixed; boundary="_004_99913d78ac894e09979cbfe945140a3emdcberlinde_" MIME-Version: 1.0 Received-SPF: pass client-ip=194.95.232.172; envelope-from=Hong.Li@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, HTML_MESSAGE=0.001, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-Debbugs-Envelope-To: submit Cc: "rekado@elephly.net" , "Hong.Li@mdc-berlin.de" X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) --_004_99913d78ac894e09979cbfe945140a3emdcberlinde_ Content-Type: multipart/alternative; boundary="_000_99913d78ac894e09979cbfe945140a3emdcberlinde_" --_000_99913d78ac894e09979cbfe945140a3emdcberlinde_ Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable -- HPC Team / IT Dept. Max Delbr=FCck Center Tel: +49-(0)30-9406-2612 Hong.Li@mdc-berlin.de --_000_99913d78ac894e09979cbfe945140a3emdcberlinde_ Content-Type: text/html; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable 



--
HPC Team / IT Dept.
Max D=
elbr=FCck Center
Tel: +49-(0)30-9406-2612
Hong.Li@=
mdc-berlin.de
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