From debbugs-submit-bounces@debbugs.gnu.org Sat May 21 18:17:52 2022 Received: (at submit) by debbugs.gnu.org; 21 May 2022 22:17:53 +0000 Received: from localhost ([127.0.0.1]:43099 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nsXPx-0007QO-6m for submit@debbugs.gnu.org; Sat, 21 May 2022 18:17:52 -0400 Received: from lists.gnu.org ([209.51.188.17]:57092) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nsXPq-0007QC-Hn for submit@debbugs.gnu.org; Sat, 21 May 2022 18:17:47 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:39538) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1nsXPq-0007gR-9Q for guix-patches@gnu.org; Sat, 21 May 2022 18:17:42 -0400 Received: from mail-lf1-x132.google.com ([2a00:1450:4864:20::132]:34345) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1nsXPo-00047I-CY for guix-patches@gnu.org; Sat, 21 May 2022 18:17:41 -0400 Received: by mail-lf1-x132.google.com with SMTP id u23so19802439lfc.1 for ; Sat, 21 May 2022 15:17:39 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; h=from:to:subject:date:message-id:user-agent:mime-version; bh=eoOL769EYBvQrTlVMOIylg3Wxa1673v+b+a6MxXoNxg=; b=RKosyNr3tPKZdQSZxcKoPnjw8hjpimg5GSTpVjyvXQN0aVMhFMCDDRuVDv4/7D/8Fm zBTijGPnTE89IKiYamwG93OP8OPfps7oyxpBe34PEKLkj7ZR3S+QDJ1aEwGFDN8I29rn 6IIbmEEMAgcGROLi51EvZRxztiW2apkzfa053k4ZYOwgyVabZE36RCn+0Ub9ggvPrhqC 7DhHUAoIcGbMAdAbrzauIg6LjqK8PVKrfP+IRsvc4ldMyRWkzVq+EFz2XgmjHAyxo73r OMUVFYygAhkuAjGxo4vwNEtkJxZ2gRY+LaSMlPmCfiC+Hw/onrVtcxaZZuEYgx31ebWj 9BVA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; h=x-gm-message-state:from:to:subject:date:message-id:user-agent :mime-version; bh=eoOL769EYBvQrTlVMOIylg3Wxa1673v+b+a6MxXoNxg=; b=ZLmFRVsB7A1VSZICyJT+wEkamZsPKdF4oscxNCkP9EZvhPBpECb5q6XL8D5mlaCvzH oBc9yOlRqJ/NMUv7suKH4CJyyQweuX0YXuL9vt0n/pIWRzPKEfhT/xuhOVPPmACuXM7X gwqmZ3+MGVwME0a4gpwdtUpaxoGMOR0Pyg/ImcbsAHj6OcovXVYWXa+mokJy1dmKI5RE BnEFwLLh7UqpiLG3EKvd/qdVGXcysLQTCS23RNC6XUAnxTVKaKmkPWTXyNKa0DMNlFRD nzw6zt+OnKoHBq/N4VjoW6q7FMXs33CdqlpHXXgMcbIuFPXrvFfElwH9F5iVNzpGNcdC 22xg== X-Gm-Message-State: AOAM531uog0aSX+X7z+bl0gaj3EQxnXvd6YBk42h7C+3zxsfEIMyvtaC G9Eeji1VXeHOOhlY81bvTlK9ZnY+6Zg= X-Google-Smtp-Source: ABdhPJynDJlU8BkqKQ3gwvszSHaM9VhUlA1XU4MSVxpFLcS8svMC6zBFeqCDgIbGSVbpwZSXsU6Gvg== X-Received: by 2002:a05:6512:1502:b0:474:28db:7b37 with SMTP id bq2-20020a056512150200b0047428db7b37mr11492997lfb.250.1653171458138; Sat, 21 May 2022 15:17:38 -0700 (PDT) Received: from elephant ([5.164.192.222]) by smtp.gmail.com with ESMTPSA id f13-20020ac2508d000000b0047255d21121sm1210397lfm.80.2022.05.21.15.17.37 for (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sat, 21 May 2022 15:17:37 -0700 (PDT) From: "Artyom V. Poptsov" To: guix-patches@gnu.org Subject: [PATCH] gnu: Add python-blis Date: Sun, 22 May 2022 01:17:33 +0300 Message-ID: <87tu9ifs3m.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.2 (gnu/linux) MIME-Version: 1.0 Content-Type: multipart/signed; boundary="==-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" Received-SPF: pass client-ip=2a00:1450:4864:20::132; envelope-from=poptsov.artyom@gmail.com; helo=mail-lf1-x132.google.com X-Spam_score_int: -5 X-Spam_score: -0.6 X-Spam_bar: / X-Spam_report: (-0.6 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, RCVD_IN_SORBS_WEB=1.5, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=no autolearn_force=no X-Spam_action: no action X-Spam-Score: 0.2 (/) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -0.8 (/) --==-=-= Content-Type: multipart/mixed; boundary="=-=-=" --=-=-= Content-Type: text/plain Hello, this patch adds "blis" Python module[1] under the name "python-blis". - Artyom References: 1. "Fast matrix-multiplication as a self-contained Python library" https://github.com/explosion/cython-blis --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=0001-gnu-Add-python-blis.patch Content-Transfer-Encoding: quoted-printable From=203d22d0e5f7929ac1b782217ec207a5e462316c66 Mon Sep 17 00:00:00 2001 From: "Artyom V. Poptsov" Date: Sun, 22 May 2022 01:14:26 +0300 Subject: [PATCH] gnu: Add python-blis * gnu/packages/python-xyz.scm (python-blis): New variable. =2D-- gnu/packages/python-xyz.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 3c4fa16d16..95b85b9931 100644 =2D-- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -31449,3 +31449,27 @@ written in C.") (synopsis "Cython bindings for MurmurHash2") (description "This package provides Cython bindings for MurmurHash2.") (license license:expat))) + +(define-public python-blis + (package + (name "python-blis") + (version "0.9.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "blis" version)) + (sha256 + (base32 + "0adl7knj11rglg6l9nfqccl8kgs2v1c7qllv9c5kf5k796hir7k9")))) + (build-system python-build-system) + (native-inputs (list python-pytest python-cython)) + (inputs (list python python-numpy python-hypothesis)) + (arguments + ;; XXX: Tests are failing with the following error: + ;; AttributeError: module 'numpy.__config__' has no attribute 'blas_i= lp64_opt_info' + (list #:tests? #f)) + (home-page "https://github.com/explosion/cython-blis") + (synopsis "Fast matrix-multiplication Python library") + (description + "This package provides the @url{https://github.com/flame/blis, +Blis linear algebra} routines as a self-contained Python C-extension.") + (license license:bsd-3))) =2D-=20 2.25.1 --=-=-= Content-Type: text/plain Content-Transfer-Encoding: quoted-printable =2D-=20 Artyom "avp" Poptsov Home page: https://memory-heap.org/~avp/ CADR Hackerspace co-founder: https://cadrspace.ru/ GPG: D0C2 EAC1 3310 822D 98DE B57C E9C5 A2D9 0898 A02F --=-=-=-- --==-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE0MLqwTMQgi2Y3rV86cWi2QiYoC8FAmKJZP0ACgkQ6cWi2QiY oC8VnQf+OTRCZWGDEXb7ujqZNsjogn05h+RRG16jDfZZq+B0MFxpga8ycN+4oEHH VFZX9A9UbOJR276krwtTVGgVBnsVp6NyNCwR9b69G39ihMITiS6fA8i7RXNT+aie 4rS0kgZIP1x8nWq01qACk27QTGMPLIIhGFiAub0ZyeI/gpHLTeGpxCUHva+rV0cP zp/SoukUjl6KGpq9GXSlFEoKoJnOjU/Q0DtaT5g2us4OHOo3GDVoF+ep0NmVRruO guzQPau/230OMuY0l/TKxLtrtWvdVJiDjXijBKlZlk1QxlFs1VBK4UsfpVYckjLl R3mLuUxNgNwT9fVgxgzq3PfQKfTL2Q== =8DRQ -----END PGP SIGNATURE----- --==-=-=-- From debbugs-submit-bounces@debbugs.gnu.org Fri May 27 17:23:31 2022 Received: (at 55565) by debbugs.gnu.org; 27 May 2022 21:23:31 +0000 Received: from localhost ([127.0.0.1]:35900 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nuhQg-0000VP-Vc for submit@debbugs.gnu.org; Fri, 27 May 2022 17:23:31 -0400 Received: from eggs.gnu.org ([209.51.188.92]:56282) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nuhQf-0000VC-Bg for 55565@debbugs.gnu.org; Fri, 27 May 2022 17:23:29 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]:40508) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1nuhQa-0008Vo-4p; Fri, 27 May 2022 17:23:24 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:In-Reply-To:Date:References:Subject:To: From; bh=ClbwPAKJvwooKUFyvWLk298AyVPSsAIb9dR8pwOZHqg=; b=deQHsDV4eBlIVUYtKuOz T2RYHxUkkWMhTN1rIUPUBOzyIWr6f/C/8W5S4duwMQCNulHwSZJoNOea9DTwGZsLKGuqCuS1Uw+3P gEmH5esnDwFW/6uaQp9aBgAoLJ8owKT3D+9UVreFz819h6+Xup7N+agIILCAQqOphbcBGLrus1/t4 XHRDhcf1C4wxRcdUeVDDmJqAMJjHjEKYKbSfVM7C+ysmV32OZp/+yn3KkUEmHNVdkORips5iehGv5 uX7ONCBzWSKVe7xgY+nJMND4oVQZMdgguweTXWzCVCp/k0rNbDuu5ghyQ2v3wBUjrJztxIiuVVf3G axTnu2Y7gWqb9A==; Received: from 91-160-117-201.subs.proxad.net ([91.160.117.201]:64482 helo=ribbon) by fencepost.gnu.org with esmtpsa (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1nuhQZ-0001F4-Nw; Fri, 27 May 2022 17:23:23 -0400 From: =?utf-8?Q?Ludovic_Court=C3=A8s?= To: "Artyom V. Poptsov" Subject: Re: bug#55565: [PATCH] gnu: Add python-blis References: <87tu9ifs3m.fsf@gmail.com> Date: Fri, 27 May 2022 23:23:22 +0200 In-Reply-To: <87tu9ifs3m.fsf@gmail.com> (Artyom V. Poptsov's message of "Sun, 22 May 2022 01:17:33 +0300") Message-ID: <87pmjyd60l.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.2 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 55565 Cc: 55565@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Hi Artyom, "Artyom V. Poptsov" skribis: > From 3d22d0e5f7929ac1b782217ec207a5e462316c66 Mon Sep 17 00:00:00 2001 > From: "Artyom V. Poptsov" > Date: Sun, 22 May 2022 01:14:26 +0300 > Subject: [PATCH] gnu: Add python-blis > > * gnu/packages/python-xyz.scm (python-blis): New variable. [...] > + (native-inputs (list python-pytest python-cython)) > + (inputs (list python python-numpy python-hypothesis)) > + (arguments > + ;; XXX: Tests are failing with the following error: > + ;; AttributeError: module 'numpy.__config__' has no attribute 'blas= _ilp64_opt_info' > + (list #:tests? #f)) Doesn=E2=80=99t that failure suggest something=E2=80=99s really wrong? See= ms worth investigating. > + (home-page "https://github.com/explosion/cython-blis") > + (synopsis "Fast matrix-multiplication Python library") > + (description > + "This package provides the @url{https://github.com/flame/blis, > +Blis linear algebra} routines as a self-contained Python C-extension.") Blis isn=E2=80=99t listed in =E2=80=98inputs=E2=80=99, and apparently that= =E2=80=99s because it=E2=80=99s bundled. Could you =E2=80=9Cunbundle=E2=80=9D it? That is, add Blis as an input, ma= ke sure it gets used during the build process, and remove the bundled copy. Thanks in advance, Ludo=E2=80=99. From debbugs-submit-bounces@debbugs.gnu.org Sat Jun 11 06:44:53 2022 Received: (at 55565) by debbugs.gnu.org; 11 Jun 2022 10:44:53 +0000 Received: from localhost ([127.0.0.1]:51952 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nzybq-0007tR-EM for submit@debbugs.gnu.org; Sat, 11 Jun 2022 06:44:53 -0400 Received: from mail-lj1-f182.google.com ([209.85.208.182]:40778) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nzybl-0007tA-PO for 55565@debbugs.gnu.org; Sat, 11 Jun 2022 06:44:49 -0400 Received: by mail-lj1-f182.google.com with SMTP id y29so1535497ljd.7 for <55565@debbugs.gnu.org>; Sat, 11 Jun 2022 03:44:45 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; h=from:to:cc:subject:references:date:in-reply-to:message-id :user-agent:mime-version; bh=2F21B/ODDLNTqKzDdYukzkKZO6E9WFBuSoXtRWyb0mo=; b=cJU8TrSmtUQWfCGVkKRI45OIEpun4U9w0Azq5rOT/cr5OQpTLFvavr+U9fmVD8+vib xa1Gw4MhxoWVdQ14Aa8QAJADJhuFNGs/brwxbNiYntN53ImBLp6JZHFlxIUh3uNIFaFe 9K2wEnbVNcMAEHKAtYz85yBD297ubS6+VArEVefYoTLrfiWXtoPFfu83/XgC/63Z/Sn2 eCm8osA5vq52xCuo4JJlmqWsXG4g5/uy3rmPXN1CpCRyaMiTp9nBzdQrieiS1UbZTsZW UB5a8Kfz6rnFqRXusD0a0A9aFA2dDl2yRE2x3ozcWJGbBDa5+V2b9dZ8tXfd5fn6nHop 4acw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; h=x-gm-message-state:from:to:cc:subject:references:date:in-reply-to :message-id:user-agent:mime-version; bh=2F21B/ODDLNTqKzDdYukzkKZO6E9WFBuSoXtRWyb0mo=; b=39bOqeD7DxfzCsbvSptew//lGUZsElMWyOh6AvMIoI32YlQ4kD9jn6OsfM29Au7IH6 nGbp6XDX1JIMldUrQonXqdvUjsA7RBi/UWPbVwhV77ri9HB3sdflmyaKLYGpRZH9+/Wr /4jVaXb7/Fch7t5FQUBwbTux/ltd3BUmoGCwqM5ECGZ3lqhWr4LM7zYlP/oR+2MEwMNz CQGuP8EIMYQQegRLHdVrBF2Lzfa0QDbjogpiN0i+huJVA//tcud/j/pY677EaUJewgVM NJ04fysVsE8Hn61/7xb83q4H1vPvDZc9o0rcz7WSO0YxDaH6TFdLOIUaO3RcSTQNjzzJ 6LWw== X-Gm-Message-State: AOAM5304jjVAW1zn8qYF6STT+VdU4M+SLBCwxZTDoZWiTBjlixnCGQTF 0X38M8wLGo9lzli6uxdC1ZZjebFlUVs= X-Google-Smtp-Source: ABdhPJy1jQU6WPWlpbP0IjN64WkKgLIQagUJoQjf8PE4uI095ZITzFA5drtqNQdAKhLhs0zYqxukfg== X-Received: by 2002:a2e:ba06:0:b0:255:b837:a36c with SMTP id p6-20020a2eba06000000b00255b837a36cmr11019237lja.81.1654944279147; Sat, 11 Jun 2022 03:44:39 -0700 (PDT) Received: from elephant ([5.164.222.47]) by smtp.gmail.com with ESMTPSA id y26-20020a2e545a000000b0024cac53a82csm318552ljd.0.2022.06.11.03.44.38 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sat, 11 Jun 2022 03:44:38 -0700 (PDT) From: "Artyom V. Poptsov" To: Ludovic =?utf-8?Q?Court=C3=A8s?= Subject: Re: bug#55565: [PATCH] gnu: Add python-blis References: <87tu9ifs3m.fsf@gmail.com> <87pmjyd60l.fsf@gnu.org> Date: Sat, 11 Jun 2022 13:44:34 +0300 In-Reply-To: <87pmjyd60l.fsf@gnu.org> ("Ludovic =?utf-8?Q?Court=C3=A8s=22'?= =?utf-8?Q?s?= message of "Fri, 27 May 2022 23:23:22 +0200") Message-ID: <87pmjfxywd.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.2 (gnu/linux) MIME-Version: 1.0 Content-Type: multipart/signed; boundary="==-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 55565 Cc: 55565@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) --==-=-= Content-Type: multipart/mixed; boundary="=-=-=" --=-=-= Content-Type: text/plain Hello Ludovic, thanks for the feedback. I tried to fix the patch and got some promising results. Please find the updated patch attached. Basically I patched 'blis/benchmark.py' to use "blas_opt_info" instead of "blas_ilp64_opt_info" and tests went fine. An issue with different numpy versions I guess? I also added "blis" and "python-numpy-next" to the "native-inputs". - Artyom --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=0001-gnu-Add-python-blis.patch Content-Transfer-Encoding: quoted-printable From=203d088c0cbeee76c59dc140db16119a5e3f837b08 Mon Sep 17 00:00:00 2001 From: "Artyom V. Poptsov" Date: Sun, 22 May 2022 01:14:26 +0300 Subject: [PATCH] gnu: Add python-blis * gnu/packages/python-xyz.scm (python-blis): New variable. =2D-- gnu/packages/python-xyz.scm | 36 ++++++++++++++++++++++++++++++++++++ 1 file changed, 36 insertions(+) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 5f9ce4fdfe..934dfd2959 100644 =2D-- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -29435,3 +29435,39 @@ Information about these scales can be @url{https://en.wikipedia.org/wiki/List_of_musical_scales_and_modes, found= on Wikipedia}.") (license license:expat))) + +(define-public python-blis + (package + (name "python-blis") + (version "0.9.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/explosion/cython-blis") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1p4y4mf8046kv2syf2s0v6mf4s000anr1ws7w3fny852gpp6czk4")))) + (build-system python-build-system) + (native-inputs (list python-numpy-next + python-pytest + python-cython + blis + python-hypothesis)) + (arguments + (list #:tests? #t + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'patch + (lambda _ + (substitute* "./blis/benchmark.py" + (("blas_ilp64_opt_info") + "blas_opt_info"))))))) + (home-page "https://github.com/explosion/cython-blis") + (synopsis "Fast matrix-multiplication Python library") + (description + "This package provides the @url{https://github.com/flame/blis, +Blis linear algebra} routines as a self-contained Python C-extension.") + (license license:bsd-3))) =2D-=20 2.25.1 --=-=-= Content-Type: text/plain Content-Transfer-Encoding: quoted-printable =2D-=20 Artyom "avp" Poptsov Home page: https://memory-heap.org/~avp/ CADR Hackerspace co-founder: https://cadrspace.ru/ GPG: D0C2 EAC1 3310 822D 98DE B57C E9C5 A2D9 0898 A02F --=-=-=-- --==-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE0MLqwTMQgi2Y3rV86cWi2QiYoC8FAmKkchIACgkQ6cWi2QiY oC/YjQgApAafjyBkTS+z64ZdKCt7nBzeN0fcYRHBmjFIJjAkzzIiUEMCxga5hRoq OhAynKks3NjYp78Nisj0IH3KyZW6xxGov/e6FioZrPnWeEp/WUSik9aQvMWuPgJ0 PacIatbAH7hfLi7LXPwC0p03PE5KTWFjN6LjhQfuoPt+k+3lkybfpwL4rySGf1K5 Uvxz00KLnhF/orbTA6DkMEYD6e375bVGO7l7EygRmhiPnl92IQzZl41Qm80AlU4z KL5nSGwn9QqvXKPYLOr9UxdJBazcIAU9413f58Ni7ijilrHpjqwKCD37ZIyvfGJz m+DXj5XmPOQFeUI9khUgK8X2wCMTug== =XKhy -----END PGP SIGNATURE----- --==-=-=-- From debbugs-submit-bounces@debbugs.gnu.org Mon Jun 13 06:20:29 2022 Received: (at 55565) by debbugs.gnu.org; 13 Jun 2022 10:20:29 +0000 Received: from localhost ([127.0.0.1]:57301 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1o0hBN-00076O-Dl for submit@debbugs.gnu.org; Mon, 13 Jun 2022 06:20:29 -0400 Received: from eggs.gnu.org ([209.51.188.92]:38584) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1o0hBL-000764-Sj for 55565@debbugs.gnu.org; Mon, 13 Jun 2022 06:20:28 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]:35442) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1o0hBF-0006Xt-Fa; Mon, 13 Jun 2022 06:20:22 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:In-Reply-To:Date:References:Subject:To: From; bh=hiuYlkbszH2F7JMAyknmTmIGQKUNJDUvcnq84Ko0jTE=; b=fMbaKjJiqRD2b9SMag9W NzZr37OjF9SaSwUxA+ONVnxnMGcYqLIY8/Dzmr4+ZwOfHS9RJGtxTT0tkc+kMZI9GaF2wxUBYgnWC B+E/aNwIlXh+Q7BL96j9SVtJkLzevPNLZvuSWYXLFQRTnvdVDyYwXuugBtcCh6Kn4QAgeNv3VBgDJ BivPutOEJsMwgTQF1mZ11kPwEU8fSIOV87UE1/BnAzDGTnJRtAx7HFZDvX8mgsdt90yr4nNZn0D+n 8h30vqyxuKxOmIs/nmwNb+NjeWmH02ThQPtGTKalE+XK9XC5L0UbBMfkYA8qtTG+GmBtl0WWDLoIc O8QJVlJtHpq3cw==; Received: from [2001:660:6102:320:e120:2c8f:8909:cdfe] (port=43448 helo=ribbon) by fencepost.gnu.org with esmtpsa (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1o0hBF-0003Y4-24; Mon, 13 Jun 2022 06:20:21 -0400 From: =?utf-8?Q?Ludovic_Court=C3=A8s?= To: "Artyom V. Poptsov" Subject: Re: bug#55565: [PATCH] gnu: Add python-blis References: <87tu9ifs3m.fsf@gmail.com> <87pmjyd60l.fsf@gnu.org> <87pmjfxywd.fsf@gmail.com> X-URL: http://www.fdn.fr/~lcourtes/ X-Revolutionary-Date: Quintidi 25 Prairial an 230 de la =?utf-8?Q?R=C3=A9v?= =?utf-8?Q?olution=2C?= jour de la Tanche X-PGP-Key-ID: 0x090B11993D9AEBB5 X-PGP-Key: http://www.fdn.fr/~lcourtes/ludovic.asc X-PGP-Fingerprint: 3CE4 6455 8A84 FDC6 9DB4 0CFB 090B 1199 3D9A EBB5 X-OS: x86_64-pc-linux-gnu Date: Mon, 13 Jun 2022 12:20:18 +0200 In-Reply-To: <87pmjfxywd.fsf@gmail.com> (Artyom V. Poptsov's message of "Sat, 11 Jun 2022 13:44:34 +0300") Message-ID: <87wndksw4d.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/28.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 55565 Cc: 55565@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -3.3 (---) Hi Artyom, "Artyom V. Poptsov" skribis: > Basically I patched 'blis/benchmark.py' to use "blas_opt_info" instead > of "blas_ilp64_opt_info" and tests went fine. An issue with different > numpy versions I guess? I also added "blis" and "python-numpy-next" to > the "native-inputs". Unfortunately this is not sufficient: the source bundles a copy of BLIS under =E2=80=98blis/_src=E2=80=99 and it starts by building it (which is wh= y it takes so long), whether or not BLIS is among the inputs. Could you (1) add a snippet that removes =E2=80=98blis/_src=E2=80=99, and (= 2) see whether/how =E2=80=98setup.py=E2=80=99 can be patched to not build BLIS? I= t might be that commenting out the line that reads: cmdclass=3D{"build_ext": ExtensionBuilder}, would be enough, I don=E2=80=99t know. Anyhow, given that BLIS is the kind of package that=E2=80=99s highly tuned = on our side for performance and reproducibility configuration, it=E2=80=99s important to not have several copies around. > + (native-inputs (list python-numpy-next > + python-pytest > + python-cython > + blis > + python-hypothesis)) NumPy and BLIS should definitely be =E2=80=98inputs=E2=80=99, not =E2=80=98= native-inputs=E2=80=99; not sure about =E2=80=98hypothesis=E2=80=99. Also, please include a short comment explaining why numpy-next is used rather than numpy (like =E2=80=9Cversion >=3D X.Y required=E2=80=9D). Could you send an updated patch? Sorry that this is providing trickier than we=E2=80=99d like! Thanks, Ludo=E2=80=99. From debbugs-submit-bounces@debbugs.gnu.org Fri Sep 01 20:01:11 2023 Received: (at 55565-done) by debbugs.gnu.org; 2 Sep 2023 00:01:11 +0000 Received: from localhost ([127.0.0.1]:34509 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qcE4d-0001gh-EQ for submit@debbugs.gnu.org; Fri, 01 Sep 2023 20:01:11 -0400 Received: from cascadia.aikidev.net ([173.255.214.101]:54114) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qcE4b-0001Ut-Er for 55565-done@debbugs.gnu.org; Fri, 01 Sep 2023 20:01:10 -0400 Received: from localhost (unknown [IPv6:2600:3c01:e000:21:7:77:0:50]) (Authenticated sender: vagrant@cascadia.debian.net) by cascadia.aikidev.net (Postfix) with ESMTPSA id B40361AA7B; Fri, 1 Sep 2023 17:00:50 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=debian.org; s=1.vagrant.user; t=1693612850; bh=HymBZPQaC3KnGqCcXrHqmlbR4XlQUZBFHolDEGgEqqI=; h=From:To:Subject:In-Reply-To:References:Date:From; b=Pv6ugPBD4lPHCR1wAFoInWAkLNVUpkolmEx03kFyWTgUPymY5200e6aJIqNxVlR8g AF5DoLuIJMXfv507Mj4f3yK9C4NSvysoNAuILHVOOjf92FRTNpjY/09gAMHhRWOk6v 6z1V5zXj/dahS4nrqXb5q/211HVakqfdpcVKJqy3IZ8MUMREbl8VKqJRq4JIFIO86i mXpD+aKqs+CUCxKn2H5w7K2ApN5ASRuP7VSiLE72OCezb9EjFSKSTMgPr5XvMy8H0K R8a4U9OKnamGS0kKfqIHazKzENYNPDl8tTfHaMm11gW6M9Vy0w/IerT1K0OS+YU9cC 9vKzCyb5l6wUA== From: Vagrant Cascadian To: "Artyom V. Poptsov" , 55565-done@debbugs.gnu.org Subject: Re: [bug#55565] [PATCH] gnu: Add python-blis In-Reply-To: <87tu9ifs3m.fsf@gmail.com> References: <87tu9ifs3m.fsf@gmail.com> Date: Fri, 01 Sep 2023 17:00:47 -0700 Message-ID: <87a5u5qw9c.fsf@wireframe> MIME-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 55565-done X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) --=-=-= Content-Type: text/plain On 2022-05-22, Artyom V. Poptsov wrote: > Subject: [PATCH] gnu: Add python-blis > > * gnu/packages/python-xyz.scm (python-blis): New variable. ... > +(define-public python-blis > + (package > + (name "python-blis") > + (version "0.9.0") python-blis 0.9.1 was added in: 069618522d3ee040e0b0f2d9f24ceb763ce434aa gnu: Add python-blis. Marking as done. live well, vagrant --=-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iHUEARYKAB0WIQRlgHNhO/zFx+LkXUXcUY/If5cWqgUCZPJ7LwAKCRDcUY/If5cW qrGqAP9X9rdFN8zG2n/8AwaccBpkgnNNnFfqN0h66EYn1347uwD/R8Q9PKXvvLrv lWa7UCuEreibw+AXoVPKHItBsF5qGA4= =I4hg -----END PGP SIGNATURE----- --=-=-=-- From unknown Fri Sep 12 22:55:25 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. 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