From unknown Mon Jun 23 06:02:33 2025 X-Loop: help-debbugs@gnu.org Subject: [bug#55154] [PATCH] gnu: Add r-afpt. Resent-From: Navid Afkhami Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Wed, 27 Apr 2022 16:01:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 55154 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55154@debbugs.gnu.org Cc: rekado@elephly.net X-Debbugs-Original-To: X-Debbugs-Original-Xcc: rekado@elephly.net Received: via spool by submit@debbugs.gnu.org id=B.16510752558583 (code B ref -1); Wed, 27 Apr 2022 16:01:01 +0000 Received: (at submit) by debbugs.gnu.org; 27 Apr 2022 16:00:55 +0000 Received: from localhost ([127.0.0.1]:44001 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1njk62-0002EN-GH for submit@debbugs.gnu.org; Wed, 27 Apr 2022 12:00:55 -0400 Received: from lists.gnu.org ([209.51.188.17]:36758) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1njiqC-00045V-CQ for submit@debbugs.gnu.org; Wed, 27 Apr 2022 10:40:29 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:60180) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1njiqB-0000xB-6P for guix-patches@gnu.org; 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Wed, 27 Apr 2022 16:40:12 +0200 (CEST) Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS for ; Wed, 27 Apr 2022 16:40:12 +0200 (CEST) Received: from Bonsai.mdc-berlin.net (141.80.245.78) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2375.24; Wed, 27 Apr 2022 16:40:12 +0200 From: Navid Afkhami Date: Wed, 27 Apr 2022 16:40:01 +0200 Message-ID: <20220427144001.43082-1-navid.afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.25.1 MIME-Version: 1.0 Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: 8bit X-Originating-IP: [141.80.245.78] X-ClientProxiedBy: SW-IT-P-EX1.mdc-berlin.net (141.80.113.54) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1000-26858.007 X-TM-AS-Result: No-10--2.647000-5.000000 X-TMASE-MatchedRID: 4RK2gbhxGJP/R1NSMc2qCU7nLUqYrlslFIuBIWrdOeOU8ftiyKjZrRjx 55n/478OoK9M8rNZd7Q+T46mdEugcSq+GZ9ZHxIhuW77/y896siFzNNPDc6umOCbuVI7hVbLd93 A76AVNsDj2fPqln0vq053CIdddyS+F9qdQ9GX7oQ7lKkz03w06+uLFZZYlisfv1l2Uvx6idq6vV BUUydJCsRB0bsfrpPI34T9cYMsdwyocJUou/94bPGXit6IZPhlbJs7Qf/a6RKEuSl3C4bbsxj2q d6xc5FD7iee7m9sTvLcm0WLMeTjtpB/Ta80uUEaopbmVGAaUNDcUke23u350xU7OJY7bdPeD9iv /sJMsVc7Oyi/ulxQeKUgZdIaXg4f X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--2.647000-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1000-26858.007 X-TM-SNTS-SMTP: 23EE2D6FAE45F4A9063CE66BF60B308FB51032D01731E26EBD932D91DF4FBB262000:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-Mailman-Approved-At: Wed, 27 Apr 2022 12:00:53 -0400 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) From: Navid * gnu/packages/cran.scm (r-afpt): New variable. --- gnu/packages/cran.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index bc95eee065..e7d3fc19e0 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -35,6 +35,7 @@ ;;; Copyright © 2020 Aniket Patil ;;; Copyright © 2021 Marcel Schilling ;;; Copyright © 2021 Guillaume Le Vaillant +;;; Copyright © 2022 Navid Afkhami ;;; ;;; This file is part of GNU Guix. ;;; @@ -112,6 +113,30 @@ #:use-module (gnu packages xml) #:use-module (gnu packages xorg)) +(define-public r-afpt + (package + (name "r-afpt") + (version "1.1.0.1") + (source (origin + (method url-fetch) + (uri (cran-uri "afpt" version)) + (sha256 + (base32 + "0cg5cdm9nl1hs6f3j0ljpw4bkqvh3ksyj615b9nnbqs5k28lyds9")))) + (properties `((upstream-name . "afpt"))) + (build-system r-build-system) + (native-inputs (list r-knitr)) + (home-page "https://github.com/MarcoKlH/afpt-r/") + (synopsis "Tools for modelling of animal flight performance") + (description + "This package allows estimation and modelling of flight costs in animal +(vertebrate) flight, implementing the aerodynamic power model. Flight +performance is estimated based on basic morphological measurements such as body +mass, wingspan and wing area. @code{Afpt} can be used to make predictions on +how animals should adjust their flight behaviour and wingbeat kinematics to +varying flight conditions.") + (license license:gpl3+))) + (define-public r-aod (package (name "r-aod") -- 2.25.1 From unknown Mon Jun 23 06:02:33 2025 MIME-Version: 1.0 X-Mailer: MIME-tools 5.505 (Entity 5.505) X-Loop: help-debbugs@gnu.org From: help-debbugs@gnu.org (GNU bug Tracking System) To: Navid Afkhami Subject: bug#55154: closed (Re: [bug#55154] [PATCH] gnu: Add r-afpt.) Message-ID: References: <87ilqr274a.fsf@elephly.net> <20220427144001.43082-1-navid.afkhami@mdc-berlin.de> X-Gnu-PR-Message: they-closed 55154 X-Gnu-PR-Package: guix-patches X-Gnu-PR-Keywords: patch Reply-To: 55154@debbugs.gnu.org Date: Fri, 29 Apr 2022 16:22:03 +0000 Content-Type: multipart/mixed; boundary="----------=_1651249323-19647-1" This is a multi-part message in MIME format... ------------=_1651249323-19647-1 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable Content-Type: text/plain; charset="utf-8" Your bug report #55154: [PATCH] gnu: Add r-afpt. which was filed against the guix-patches package, has been closed. The explanation is attached below, along with your original report. If you require more details, please reply to 55154@debbugs.gnu.org. --=20 55154: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D55154 GNU Bug Tracking System Contact help-debbugs@gnu.org with problems ------------=_1651249323-19647-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at 55154-done) by debbugs.gnu.org; 29 Apr 2022 16:21:24 +0000 Received: from localhost ([127.0.0.1]:55212 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nkTMx-000556-QL for submit@debbugs.gnu.org; Fri, 29 Apr 2022 12:21:23 -0400 Received: from sender4-of-o50.zoho.com ([136.143.188.50]:21085) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nkTMv-00054n-Ch for 55154-done@debbugs.gnu.org; Fri, 29 Apr 2022 12:21:22 -0400 ARC-Seal: i=1; a=rsa-sha256; t=1651249273; cv=none; d=zohomail.com; s=zohoarc; b=EmrlJyA554xrKkqAGxTGWN27/pZP2RIvg02jegOQFEGvIvDRWokQWIllZMcMGtVS9l2YqCDK0fDUUjfbZge2e0DsNLWRicdvZ/9e3SYRxuL6EAVPAlB5knCc7bt2ml50C6Eik2Onp2oERwtrtlAlSwTvZZAIQY8J6DpikvQISfU= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1651249273; h=Content-Type:Content-Transfer-Encoding:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To; bh=gwjanggBGWu/PZpok/3Oa4WiN2XuzWaqVrbpg4BhQIA=; b=m3gHZgtL7jD2kaqDXKrGNk/SeYIJVefBLd6sFIO7Ik9uyZ+aotsYGu5ytLIO6mAAWgW3VZgNsWi8H+L87ewKoAR66vFVPmIQKltl8CisdMm95JSA6OchSwgdUHOAgRiEk4ttcVXeE+kwW6xzOExuERW/GJ9lO3VlEmWCgzLoJS0= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1651249273; s=zoho; d=elephly.net; i=rekado@elephly.net; h=References:From:From:To:To:Cc:Cc:Subject:Subject:Date:Date:In-reply-to:Message-ID:MIME-Version:Content-Type:Content-Transfer-Encoding:Message-Id:Reply-To; bh=gwjanggBGWu/PZpok/3Oa4WiN2XuzWaqVrbpg4BhQIA=; b=ae4akuv6PSy9+Rc5vIaVsSrlqlBezWOP075xmaEc/WleGODMJco+mZH2u6xutlIi ZRBY3p/0ZSBCUtv/hN5gqlRNkkdaONSOaFJA2wUBoIP0DZKQvcI2AbBa1VBm+ec41Lw FGSfwpIxVrAY2eiifS0oK+qREzXCaS2Ookb9Ss/M= Received: from localhost (143-111-142-46.pool.kielnet.net [46.142.111.143]) by mx.zohomail.com with SMTPS id 1651249272657376.82926507938726; Fri, 29 Apr 2022 09:21:12 -0700 (PDT) References: <20220427144001.43082-1-navid.afkhami@mdc-berlin.de> User-agent: mu4e 1.6.10; emacs 28.0.50 From: Ricardo Wurmus To: Navid Afkhami Subject: Re: [bug#55154] [PATCH] gnu: Add r-afpt. Date: Fri, 29 Apr 2022 18:13:37 +0200 In-reply-to: <20220427144001.43082-1-navid.afkhami@mdc-berlin.de> X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Message-ID: <87ilqr274a.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-ZohoMailClient: External X-Spam-Score: -0.0 (/) X-Debbugs-Envelope-To: 55154-done Cc: 55154-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi Navid, > From: Navid > > * gnu/packages/cran.scm (r-afpt): New variable. Thank you, this is an excellent first contribution! I applied it and pushed to the =E2=80=9Cmaster=E2=80=9D branch with commit 325d53d5f634f6490e3291304fb5522400039224. --=20 Ricardo ------------=_1651249323-19647-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at submit) by debbugs.gnu.org; 27 Apr 2022 16:00:55 +0000 Received: from localhost ([127.0.0.1]:44001 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1njk62-0002EN-GH for submit@debbugs.gnu.org; Wed, 27 Apr 2022 12:00:55 -0400 Received: from lists.gnu.org ([209.51.188.17]:36758) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1njiqC-00045V-CQ for submit@debbugs.gnu.org; Wed, 27 Apr 2022 10:40:29 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:60180) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1njiqB-0000xB-6P for guix-patches@gnu.org; Wed, 27 Apr 2022 10:40:27 -0400 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]:42483) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1njiq8-0001GO-FX for guix-patches@gnu.org; Wed, 27 Apr 2022 10:40:26 -0400 Received: from localhost (localhost [127.0.0.1]) by a2062.mx.srv.dfn.de (Postfix) with ESMTP id 77DBDA00E5 for ; Wed, 27 Apr 2022 16:40:13 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-transfer-encoding:content-type:content-type:mime-version :x-mailer:message-id:date:date:subject:subject:from:from :received:received:received; s=mdc; t=1651070412; x=1652884813; bh=fXUFYQ2P51x3tppxeMgabmFzKA3CvWWHBvaBTAzl5WM=; b=X7NtztxinFd/ 3N0LLZBRrHHV/WVDsdqIzdx9FUq3mR1Mq3k9v/VDzCwscW1nXpKH2RidK67bEidc sxAh31u9yNHRi31bc0ri6EqEeCk5DKU5dP/onfmU4PK3pObTyPkik8z8V7axvh0U 2irldRRQs9iM7Y0kb/BGNNJ9akDGt+4= Received: from a2062.mx.srv.dfn.de ([127.0.0.1]) by localhost (mgw4-han.srv.dfn.de [127.0.0.1]) (amavisd-new, port 20134) with ESMTP id vY4BfWxILbkW for ; Wed, 27 Apr 2022 16:40:12 +0200 (CEST) Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS for ; Wed, 27 Apr 2022 16:40:12 +0200 (CEST) Received: from Bonsai.mdc-berlin.net (141.80.245.78) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2375.24; Wed, 27 Apr 2022 16:40:12 +0200 From: Navid Afkhami To: Subject: [PATCH] gnu: Add r-afpt. Date: Wed, 27 Apr 2022 16:40:01 +0200 Message-ID: <20220427144001.43082-1-navid.afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.25.1 MIME-Version: 1.0 X-Debbugs-Cc: rekado@elephly.net Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: 8bit X-Originating-IP: [141.80.245.78] X-ClientProxiedBy: SW-IT-P-EX1.mdc-berlin.net (141.80.113.54) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1000-26858.007 X-TM-AS-Result: No-10--2.647000-5.000000 X-TMASE-MatchedRID: 4RK2gbhxGJP/R1NSMc2qCU7nLUqYrlslFIuBIWrdOeOU8ftiyKjZrRjx 55n/478OoK9M8rNZd7Q+T46mdEugcSq+GZ9ZHxIhuW77/y896siFzNNPDc6umOCbuVI7hVbLd93 A76AVNsDj2fPqln0vq053CIdddyS+F9qdQ9GX7oQ7lKkz03w06+uLFZZYlisfv1l2Uvx6idq6vV BUUydJCsRB0bsfrpPI34T9cYMsdwyocJUou/94bPGXit6IZPhlbJs7Qf/a6RKEuSl3C4bbsxj2q d6xc5FD7iee7m9sTvLcm0WLMeTjtpB/Ta80uUEaopbmVGAaUNDcUke23u350xU7OJY7bdPeD9iv /sJMsVc7Oyi/ulxQeKUgZdIaXg4f X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--2.647000-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1000-26858.007 X-TM-SNTS-SMTP: 23EE2D6FAE45F4A9063CE66BF60B308FB51032D01731E26EBD932D91DF4FBB262000:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-Debbugs-Envelope-To: submit X-Mailman-Approved-At: Wed, 27 Apr 2022 12:00:53 -0400 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) From: Navid * gnu/packages/cran.scm (r-afpt): New variable. --- gnu/packages/cran.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index bc95eee065..e7d3fc19e0 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -35,6 +35,7 @@ ;;; Copyright © 2020 Aniket Patil ;;; Copyright © 2021 Marcel Schilling ;;; Copyright © 2021 Guillaume Le Vaillant +;;; Copyright © 2022 Navid Afkhami ;;; ;;; This file is part of GNU Guix. ;;; @@ -112,6 +113,30 @@ #:use-module (gnu packages xml) #:use-module (gnu packages xorg)) +(define-public r-afpt + (package + (name "r-afpt") + (version "1.1.0.1") + (source (origin + (method url-fetch) + (uri (cran-uri "afpt" version)) + (sha256 + (base32 + "0cg5cdm9nl1hs6f3j0ljpw4bkqvh3ksyj615b9nnbqs5k28lyds9")))) + (properties `((upstream-name . "afpt"))) + (build-system r-build-system) + (native-inputs (list r-knitr)) + (home-page "https://github.com/MarcoKlH/afpt-r/") + (synopsis "Tools for modelling of animal flight performance") + (description + "This package allows estimation and modelling of flight costs in animal +(vertebrate) flight, implementing the aerodynamic power model. Flight +performance is estimated based on basic morphological measurements such as body +mass, wingspan and wing area. @code{Afpt} can be used to make predictions on +how animals should adjust their flight behaviour and wingbeat kinematics to +varying flight conditions.") + (license license:gpl3+))) + (define-public r-aod (package (name "r-aod") -- 2.25.1 ------------=_1651249323-19647-1--