GNU bug report logs - #55125
[PATCH 0/9] Cross-compile vcflib for RISC-V

Previous Next

Package: guix-patches;

Reported by: Arun Isaac <arunisaac <at> systemreboot.net>

Date: Tue, 26 Apr 2022 12:45:02 UTC

Severity: normal

Tags: patch

Done: Efraim Flashner <efraim <at> flashner.co.il>

Bug is archived. No further changes may be made.

Full log


Message #8 received at 55125 <at> debbugs.gnu.org (full text, mbox):

From: Arun Isaac <arunisaac <at> systemreboot.net>
To: 55125 <at> debbugs.gnu.org
Cc: Arun Isaac <arunisaac <at> systemreboot.net>
Subject: [PATCH 4/9] gnu: tabixpp: Add bzip2 and xz to inputs.
Date: Tue, 26 Apr 2022 18:16:34 +0530
tabixpp links to libbz2 from bzip2 and liblzma from xz. Therefore, bzip2 and
xz should be listed in inputs even though they are already present implicitly
in native-inputs. Else, cross-compilation will fail.

* gnu/packages/bioinformatics.scm (tabixpp)[inputs]: Add bzip2 and xz.
---
 gnu/packages/bioinformatics.scm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index e745fa9353..7cdbb748ef 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -14277,7 +14277,7 @@ (define-public tabixpp
                   (delete-file-recursively "htslib")))))
    (build-system gnu-build-system)
    (inputs
-    (list htslib zlib))
+    (list bzip2 htslib xz zlib))
    (arguments
     (list #:make-flags #~(list (string-append "CC=" #$(cc-for-target))
                                (string-append "CXX=" #$(cxx-for-target))
-- 
2.35.1





This bug report was last modified 3 years and 72 days ago.

Previous Next


GNU bug tracking system
Copyright (C) 1999 Darren O. Benham, 1997,2003 nCipher Corporation Ltd, 1994-97 Ian Jackson.