GNU bug report logs - #55120
“guix import cran” fails for some git repositories

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Ricardo Wurmus <rekado <at> elephly.net>
Subject: bug#55120: closed (“guix import
 cran” fails for some git repositories)
Date: Wed, 28 Dec 2022 18:24:02 +0000

[Message part 1 (text/plain, inline)]

Your bug report

#55120: “guix import cran” fails for some git repositories

which was filed against the guix package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to 55120 <at> debbugs.gnu.org.

-- 
55120: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=55120
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

[Message part 2 (message/rfc822, inline)]

From: Ricardo Wurmus <rekado <at> elephly.net>
To: 55120-done <at> debbugs.gnu.org
Subject: “guix import cran” fails
 for some git repositories
Date: Wed, 28 Dec 2022 19:22:36 +0100

This has been fixed in the meantime.  If you still have this problem you
may need to remove your git checkout cache in ~/.cache/guix/checkouts.

-- 
Ricardo

[Message part 3 (message/rfc822, inline)]

From: Ricardo Wurmus <rekado <at> elephly.net>
To: bug-guix <at> gnu.org
Subject: “guix import cran” fails
 for some git repositories
Date: Tue, 26 Apr 2022 08:42:01 +0200

Importing an R package from Git fails:

--8<---------------cut here---------------start------------->8---
$ guix import cran -a git -r https://github.com/RubD/Giotto/
Backtrace:
In guix/ui.scm:
   1347:6 19 (guix-import-cran . _)
In ice-9/boot-9.scm:
  1752:10 18 (with-exception-handler _ _ #:unwind? _ #:unwind-for-type _)
In guix/scripts/import/cran.scm:
   108:31 17 (_)
In guix/import/utils.scm:
   507:27 16 (recursive-import _ #:repo->guix-package _ #:guix-name _ #:version _ #:repo _)
   497:33 15 (lookup-node "https://github.com/RubD/Giotto/" #f)
In guix/memoization.scm:
     98:0 14 (mproc "https://github.com/RubD/Giotto/" #:version #f #:repo git)
In unknown file:
          13 (_ #<procedure 7ff8772e9aa0 at guix/memoization.scm:179:32 ()> #<procedure list _> (this is nothing))
In guix/import/cran.scm:
   596:24 12 (_ "https://github.com/RubD/Giotto/" #:repo _ #:version _)
   296:25 11 (fetch-description _ "https://github.com/RubD/Giotto/" _)
In guix/memoization.scm:
     98:0 10 (mproc "https://github.com/RubD/Giotto/" #:method git)
In unknown file:
           9 (_ #<procedure 7ff8772e9a00 at guix/memoization.scm:179:32 ()> #<procedure list _> (this is nothing))
In ice-9/boot-9.scm:
  1752:10  8 (with-exception-handler _ _ #:unwind? _ #:unwind-for-type _)
In guix/store.scm:
   658:37  7 (thunk)
In guix/git.scm:
    550:8  6 (latest-repository-commit #<store-connection 256.99 7ff87cea8230> "https://github.com/RubD/Giotto/" #:recursive? _ #:log-port _ # …)
    279:4  5 (update-cached-checkout _ #:ref _ #:recursive? _ #:check-out? _ #:starting-commit _ #:log-port _ #:cache-directory _)
   232:18  4 (resolve _)
In git/reference.scm:
     60:8  3 (_ _ _)
In git/bindings.scm:
     77:2  2 (raise-git-error _)
In ice-9/boot-9.scm:
  1685:16  1 (raise-exception _ #:continuable? _)
  1685:16  0 (raise-exception _ #:continuable? _)

ice-9/boot-9.scm:1685:16: In procedure raise-exception:
Git error: reference 'refs/remotes/origin/HEAD' not found
--8<---------------cut here---------------end--------------->8---

-- 
Ricardo

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