GNU bug report logs - #54887
[PATCH] gnu: Add r-abarray.

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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Mădălin Ionel Patrașcu
 <madalinionel.patrascu <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Subject: [PATCH] gnu: Add r-abarray.
Date: Tue, 12 Apr 2022 18:15:09 +0200

* gnu/packages/bioconductor.scm (r-abarray): New variable.
---
 gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++
 1 file changed, 26 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 803437a033..fffbf3da87 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1139,6 +1139,32 @@ (define-public r-abadata
 All datasets are restricted to protein coding genes.")
     (license license:gpl2+)))
 
+(define-public r-abarray
+  (package
+    (name "r-abarray")
+    (version "1.62.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "ABarray" version))
+              (sha256
+               (base32
+                "0yh7jmkwdg3kmm98ii0cxbla3s5bwy84fpg6xcpggsrriwzwfb5k"))))
+    (properties `((upstream-name . "ABarray")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-biobase r-multtest))
+    (home-page "https://bioconductor.org/packages/ABarray")
+    (synopsis
+     "Gene expression analysis for Applied Biosystems Genome Survey Microarray")
+    (description
+     "The package @code{ABarray} is designed to work with Applied Biosystems
+whole genome microarray platform, as well as any other platform whose data can
+be transformed into expression data matrix.  Functions include data
+preprocessing, filtering, control probe analysis, statistical analysis in one
+single function.  A @dfn{graphical user interface} (GUI) is also provided.  The
+raw data, processed data, graphics output and statistical results are organized
+into folders according to the analysis settings used.")
+    (license license:gpl2+)))
+
 (define-public r-aneufinderdata
   (package
    (name "r-aneufinderdata")
-- 
2.34.0

Message #10 received at 54887-done <at> debbugs.gnu.org (full text, mbox):

From: Ricardo Wurmus <rekado <at> elephly.net>
To: 54887-done <at> debbugs.gnu.org
Subject: [PATCH] gnu: Add r-abarray.
Date: Thu, 14 Apr 2022 13:25:20 +0200

Applied, thanks!

-- 
Ricardo

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