Package: guix;
Reported by: xdrcft56 <xdrcft56 <at> protonmail.com>
Date: Mon, 24 Jan 2022 18:34:02 UTC
Severity: normal
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bug-guix <at> gnu.org:bug#53511; Package guix.
(Mon, 24 Jan 2022 18:34:02 GMT) Full text and rfc822 format available.xdrcft56 <xdrcft56 <at> protonmail.com>:bug-guix <at> gnu.org.
(Mon, 24 Jan 2022 18:34:02 GMT) Full text and rfc822 format available.Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):
From: xdrcft56 <xdrcft56 <at> protonmail.com> To: "bug-guix <at> gnu.org" <bug-guix <at> gnu.org> Subject: guix pull command fails Date: Mon, 24 Jan 2022 18:28:25 +0000
[Message part 1 (text/plain, inline)]
Attempted to update guix on a foreign distro but received an error along with the following output: raspbian <at> guix:~ $ guix pull Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'... Authenticating channel 'guix', commits 9edb3f6 to 5b50e96 (1,300 new commits)... Building from this channel: guix https://git.savannah.gnu.org/git/guix.git 5b50e96 substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% building /gnu/store/dxdg9rf9d3cjrv0r900rzpwmp80a06hy-module-import.drv... building /gnu/store/n4iii4p1iwg8jmmw5jg78ibv3y86449z-module-import.drv... building /gnu/store/nxa9l0sgwk67rpwqalqsgsh5yvjxnap9-module-import-compiled.drv... building /gnu/store/j8ddymsf5nks309kg8zgjcp6ww0nc5b7-module-import-compiled.drv... building /gnu/store/aa87z2jv4nb6qqy069nv82jbyapjii1m-compute-guix-derivation.drv... substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% 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/gnu/store/ln38r6kffi3g1lxb6j0m08id8lddybj9-module-import-compiled.drv... building /gnu/store/4r6d1prj6c4flqfzz28wff76h8lnsrfy-bash-5.1.tar.xz.drv... building /gnu/store/yid6gm7wwnarmclbwb93nyxyvwbhkph9-binutils-2.37.tar.xz.drv... building /gnu/store/74ndj840imi2jq2y5p20cdgimkq5h97a-binutils-bootstrap-0.drv... building /gnu/store/7x3fkqfzmp7j8hphljfslr8ilam62n55-coreutils-8.32.tar.xz.drv... building /gnu/store/rmbddh2j2h6aigvy96dhyb3sam0w5x97-diffutils-3.8.tar.xz.drv... building /gnu/store/bj31x7yj6mccmxcn8dys56r12ch64v5b-findutils-4.8.0.tar.xz.drv... building /gnu/store/l64vz8bpbw8p2nwn49qf5m5za767hai9-gcc-10.3.0.tar.xz.drv... building /gnu/store/r8r12q8sh958dcs7cy4mldgylz768ly5-glibc-2.33.tar.xz.drv... building /gnu/store/z1hy1ysng9hl7q4r36jwqyy523hsry9f-gmp-6.0.0a.tar.xz.drv... building /gnu/store/3fvcrf1mnndixv4mr3gfap078mfvc0nq-grep-3.6.tar.xz.drv... building /gnu/store/wyqn7vxqaj09i22p54b4djz72kjzlmlv-guile-3.0.7.tar.xz.drv... building /gnu/store/3ayj6nrnxi14jakw11p9gcwj4r0lbsjb-ld-wrapper-boot0-0.drv... building /gnu/store/vs7w7zndnh9smrryyad9nwhpayv64gd4-libffi-3.3.tar.xz.drv... building /gnu/store/qizlwjqhhfx1nwk1ifl0cbhfdcrjy7ix-make-4.3.tar.xz.drv... building /gnu/store/rjqqq3z7bsj1ad84im3qb21np30fy57s-patch-2.7.6.tar.xz.drv... building /gnu/store/nf091sj7jk0prk08xczi5h44lc38qb93-make-boot0-4.3.drv... building /gnu/store/scaym8abc3dnd391jfr9wsfmjq4fykms-perl-5.34.0.tar.xz.drv... building /gnu/store/2r6qw5fk3f4lg334wd3jiwvzvssh4rv2-gettext-boot0-0.19.8.1.drv... building /gnu/store/34rvlhklld11r78pmk758280lvdpygi5-linux-libre-headers-5.10.35.drv... building /gnu/store/98hcmj1xgq47x3ccsd2g279k9xa726d1-sed-4.8.tar.xz.drv... building /gnu/store/nbjqy6pryak10w4jqlfsm3b0i6ngw6cb-glibc-intermediate-2.33.drv... building /gnu/store/5kvm8mrliicafdprcrwrfkz8v3q21cmk-tar-1.34.tar.xz.drv... building /gnu/store/kv452ysf4m5z2dlva8l5znpkssxijc62-gcc-cross-boot0-wrapped-10.3.0.drv... building /gnu/store/k817dr1wn36gjm1dgn65dl8zdxaw1l39-bash-static-5.1.8.drv... building /gnu/store/xma11m4cfxy5ad4qniyb1jnz0qvi3kr0-glibc-2.33.drv... building /gnu/store/c1pbacf5s90nlaz3apa3fgzcyql6bs2c-gcc-cross-boot0-wrapped-10.3.0.drv... building /gnu/store/l8nj0dlwnw2cl6sc9gd5c7dbrypxz1rj-binutils-2.37.drv... building /gnu/store/7m0vnxbigrn8kiv0hih89aiyhky8w9nd-libstdc++-10.3.0.drv... building /gnu/store/p90379hrdky1ki03d0pmj8w6hvak4d01-ld-wrapper-boot3-0.drv... building /gnu/store/kjfbwd9kxlnb3by2f4vpihwzazlbzlyl-zlib-1.2.11.drv... building /gnu/store/ajmmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv... / 'build' phasebuilder for `/gnu/store/ajmmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv' failed with exit code 1 build of /gnu/store/ajmmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv failed Backtrace: View build log at '/var/log/guix/drvs/aj/mmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv.bz2'. 13 (primitive-load "/gnu/store/rsfj0ksp0jxw3cqkhyjjv0bffbiazg1m-compute-guix-derivation") In ice-9/eval.scm: 155:9 12 (_ _) 159:9 11 (_ #(#(#(#(#(#(#(#(#(#(#(#(#(#(#(#(#<directory (guile-u?> ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?)) In ice-9/boot-9.scm: 152:2 10 (with-fluid* _ _ _) 152:2 9 (with-fluid* _ _ _) In ./guix/store.scm: 2123:24 8 (run-with-store #<store-connection 256.99 b3685cf8> _ #:guile-for-build _ #:system _ #:target _) 1960:8 7 (_ _) In ./guix/gexp.scm: 296:22 6 (_ _) 1180:2 5 (_ _) 1046:2 4 (_ _) 892:4 3 (_ _) In ./guix/store.scm: 2008:12 2 (_ #<store-connection 256.99 b3685cf8>) 1406:5 1 (map/accumulate-builds #<store-connection 256.99 b3685cf8> #<procedure b2326d38 at ./guix/store.scm:20?> ?) 1421:15 0 (_ #<store-connection 256.99 b3685cf8> _ _) ./guix/store.scm:1421:15: ERROR: 1. &store-protocol-error: message: "build of `/gnu/store/2w4scvc76kjx68ly67n2gkpnp945m4jg-git-minimal-2.34.0.drv' failed" status: 100 -guix pull: error: You found a bug: the program '/gnu/store/rsfj0ksp0jxw3cqkhyjjv0bffbiazg1m-compute-guix-derivation' failed to compute the derivation for Guix (version: "5b50e9634a83eb8627906c6cd6a80e0b68df9ebd"; system: "armhf-linux"; host version: "1.3.0"; pull-version: 1). Please report the COMPLETE output above by email to <bug-guix <at> gnu.org>.
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bug-guix <at> gnu.org:bug#53511; Package guix.
(Mon, 24 Jan 2022 21:26:01 GMT) Full text and rfc822 format available.Message #8 received at 53511 <at> debbugs.gnu.org (full text, mbox):
From: Maxime Devos <maximedevos <at> telenet.be> To: xdrcft56 <xdrcft56 <at> protonmail.com>, 53511 <at> debbugs.gnu.org Subject: Re: bug#53511: guix pull command fails Date: Mon, 24 Jan 2022 22:25:36 +0100
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xdrcft56 via Bug reports for GNU Guix schreef op ma 24-01-2022 om 18:28 [+0000]: > / 'build' phasebuilder for > `/gnu/store/ajmmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv' failed > with exit code 1 > build of /gnu/store/ajmmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv > failed > Backtrace: > View build log at > '/var/log/guix/drvs/aj/mmafhpmi83ssxg860wd93z9yhhhk5w-gcc- > 10.3.0.drv.bz2'. > 13 (primitive-load > "/gnu/store/rsfj0ksp0jxw3cqkhyjjv0bffbiazg1m-compute-guix- > derivation") To investigate the issue, this log file is required. Greetings, Maxime.
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bug-guix <at> gnu.org:bug#53511; Package guix.
(Mon, 24 Jan 2022 23:43:02 GMT) Full text and rfc822 format available.Message #11 received at 53511 <at> debbugs.gnu.org (full text, mbox):
From: xdrcft56 <xdrcft56 <at> protonmail.com> To: Maxime Devos <maximedevos <at> telenet.be> Cc: 53511 <at> debbugs.gnu.org Subject: Re: bug#53511: guix pull command fails Date: Mon, 24 Jan 2022 23:35:02 +0000
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Thank you. I've attached the requested log file (/var/log/guix/drvs/aj/mmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv.bz2). ‐‐‐‐‐‐‐ Original Message ‐‐‐‐‐‐‐ On Monday, January 24th, 2022 at 4:25 PM, Maxime Devos <maximedevos <at> telenet.be> wrote: > xdrcft56 via Bug reports for GNU Guix schreef op ma 24-01-2022 om 18:28 > > [+0000]: > > > / 'build' phasebuilder for > > > > `/gnu/store/ajmmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv' failed > > > > with exit code 1 > > > > build of /gnu/store/ajmmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv > > > > failed > > > > Backtrace: > > > > View build log at > > > > '/var/log/guix/drvs/aj/mmafhpmi83ssxg860wd93z9yhhhk5w-gcc- > > > > 10.3.0.drv.bz2'. > > > > 13 (primitive-load > > > > "/gnu/store/rsfj0ksp0jxw3cqkhyjjv0bffbiazg1m-compute-guix- > > > > derivation") > > To investigate the issue, this log file is required. > > Greetings, > > Maxime.
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bug-guix <at> gnu.org:bug#53511; Package guix.
(Tue, 25 Jan 2022 08:00:02 GMT) Full text and rfc822 format available.Message #14 received at 53511 <at> debbugs.gnu.org (full text, mbox):
From: Maxime Devos <maximedevos <at> telenet.be> To: xdrcft56 <xdrcft56 <at> protonmail.com> Cc: 53511 <at> debbugs.gnu.org Subject: Re: bug#53511: guix pull command fails Date: Tue, 25 Jan 2022 08:59:40 +0100
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xdrcft56 schreef op ma 24-01-2022 om 23:35 [+0000]: > Thank you. I've attached the requested log file (/var/log/guix/drvs/aj/mmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv.bz2). ‘collect2: fatal error: ld terminated with signal 9 [Killed]’ this could indicate an out-of-memory situation, which Guix cannot really do anything about. If it is a OOM, the dmesg should contain a message about it (I don't know exactly how it looks like). A future OOM can be avoided by closing some memory intensive applications (e.g. most web browsers) and reducing the number of cores used for building: "guix pull --cores=2 --max-jobs=1". In principle, it could be something else though. Can you reproduce with "guix pull --cores=2 --max-jobs=1"? Also, I'm noticing you are building everything from source. To avoid having to build things (and hence reduce the chance of an OOM) (and save energy), I recommend enabling and authorising substitutes. Greetings, Maxime.
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bug-guix <at> gnu.org:bug#53511; Package guix.
(Tue, 25 Jan 2022 18:38:02 GMT) Full text and rfc822 format available.Message #17 received at 53511 <at> debbugs.gnu.org (full text, mbox):
From: xdrcft56 <xdrcft56 <at> protonmail.com> To: Maxime Devos <maximedevos <at> telenet.be> Cc: 53511 <at> debbugs.gnu.org Subject: Re: bug#53511: guix pull command fails Date: Tue, 25 Jan 2022 18:32:21 +0000
I attempted the "guix pull --cores=2 --max-jobs=1" command as root and received the following output and error: Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'... guix pull: error: Git error: error inflating zlib stream I also ran "guix archive --authorize < ~root/.config/guix/current/share/guix/ci.guix.gnu.org.pub" in order enable and authorize a substitute but received the same error as above upon running "guix pull --cores=2 --max-jobs=1" subsequently. Finally, I reviewed dmesg and saw no change during the course of executing these commands. ‐‐‐‐‐‐‐ Original Message ‐‐‐‐‐‐‐ On Tuesday, January 25th, 2022 at 2:59 AM, Maxime Devos <maximedevos <at> telenet.be> wrote: > xdrcft56 schreef op ma 24-01-2022 om 23:35 [+0000]: > > > Thank you. I've attached the requested log file (/var/log/guix/drvs/aj/mmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv.bz2). > > ‘collect2: fatal error: ld terminated with signal 9 [Killed]’ > > this could indicate an out-of-memory situation, which Guix cannot > > really do anything about. If it is a OOM, the dmesg should contain a > > message about it (I don't know exactly how it looks like). A future > > OOM can be avoided by closing some memory intensive applications (e.g. > > most web browsers) and reducing the number of cores used for building: > > "guix pull --cores=2 --max-jobs=1". > > In principle, it could be something else though. Can you reproduce > > with "guix pull --cores=2 --max-jobs=1"? > > Also, I'm noticing you are building everything from source. > > To avoid having to build things (and hence reduce the chance of > > an OOM) (and save energy), I recommend enabling and authorising > > substitutes. > > Greetings, > > Maxime.
bug-guix <at> gnu.org:bug#53511; Package guix.
(Wed, 26 Jan 2022 19:01:02 GMT) Full text and rfc822 format available.Message #20 received at 53511 <at> debbugs.gnu.org (full text, mbox):
From: xdrcft56 <xdrcft56 <at> protonmail.com> To: Maxime Devos <maximedevos <at> telenet.be> Cc: 53511 <at> debbugs.gnu.org Subject: Re: bug#53511: guix pull command fails Date: Wed, 26 Jan 2022 18:59:50 +0000
After debugging this a bit deeper, I see that libgit2.so.1.1.0 is generating the error message "error inflating zlib stream". Which leads me to suspect that the reason I can't "guix pull" is related to guile-git. I've already reinstalled guix and the error persists. Is there a way to update guile-git/libgit2.so.1.1.0 without having the ability to "guix pull && guix package -u"? ‐‐‐‐‐‐‐ Original Message ‐‐‐‐‐‐‐ On Tuesday, January 25th, 2022 at 1:32 PM, xdrcft56 <xdrcft56 <at> protonmail.com> wrote: > I attempted the "guix pull --cores=2 --max-jobs=1" command as root and received the following output and error: > > Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'... > > guix pull: error: Git error: error inflating zlib stream > > I also ran "guix archive --authorize < ~root/.config/guix/current/share/guix/ci.guix.gnu.org.pub" in order enable and authorize a substitute but received the same error as above upon running "guix pull --cores=2 --max-jobs=1" subsequently. > > Finally, I reviewed dmesg and saw no change during the course of executing these commands. > > ‐‐‐‐‐‐‐ Original Message ‐‐‐‐‐‐‐ > > On Tuesday, January 25th, 2022 at 2:59 AM, Maxime Devos maximedevos <at> telenet.be wrote: > > > xdrcft56 schreef op ma 24-01-2022 om 23:35 [+0000]: > > > > > Thank you. I've attached the requested log file (/var/log/guix/drvs/aj/mmafhpmi83ssxg860wd93z9yhhhk5w-gcc-10.3.0.drv.bz2). > > > > ‘collect2: fatal error: ld terminated with signal 9 [Killed]’ > > > > this could indicate an out-of-memory situation, which Guix cannot > > > > really do anything about. If it is a OOM, the dmesg should contain a > > > > message about it (I don't know exactly how it looks like). A future > > > > OOM can be avoided by closing some memory intensive applications (e.g. > > > > most web browsers) and reducing the number of cores used for building: > > > > "guix pull --cores=2 --max-jobs=1". > > > > In principle, it could be something else though. Can you reproduce > > > > with "guix pull --cores=2 --max-jobs=1"? > > > > Also, I'm noticing you are building everything from source. > > > > To avoid having to build things (and hence reduce the chance of > > > > an OOM) (and save energy), I recommend enabling and authorising > > > > substitutes. > > > > Greetings, > > > > Maxime.
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