GNU bug report logs - #53017
[PATCH 00/17] Add julia-biosequences and julia-bioalignments

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From: zimoun <zimon.toutoune <at> gmail.com>
To: 53017 <at> debbugs.gnu.org
Cc: efraim <at> flashner.co.il, zimoun <zimon.toutoune <at> gmail.com>
Subject: [bug#53017] [PATCH 14/17] gnu: Add julia-biosymbols.
Date: Tue,  4 Jan 2022 23:47:52 +0100

* gnu/packages/julia-xyz.scm (julia-biosymbols): New variable.
---
 gnu/packages/julia-xyz.scm | 24 ++++++++++++++++++++++++
 1 file changed, 24 insertions(+)

diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 404c35627c..04d0beeb96 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -387,6 +387,30 @@ (define-public julia-biogenerics
 other types or methods used by other BioJulia packages.")
       (license license:expat))))
 
+(define-public julia-biosymbols
+  (package
+    (name "julia-biosymbols")
+    (version "4.0.4")  ;Older release for compatibility with julia-biosequence
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/BioJulia/BioSymbols.jl")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1222rwdndi777lai8a6dwrh35i5rgmj75kcrhn8si72sxgz0syjm"))))
+    (build-system julia-build-system)
+    (arguments
+     `(#:tests? #f))
+    (propagated-inputs
+     (list julia-automa))
+    (home-page "https://github.com/BioJulia/BioSymbols.jl")
+    (synopsis "Primitive types for nucleic acids and amino acids")
+    (description "This package defines the primitive types for nucleic acids
+and amino acids that are used ny otherBioJulia packages.")
+    (license license:expat)))
+
 (define-public julia-blockarrays
   (package
     (name "julia-blockarrays")
-- 
2.33.1

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