From unknown Sat Jun 21 05:19:13 2025 X-Loop: help-debbugs@gnu.org Subject: bug#48811: R 4.1.0 does not build Resent-From: meedstrom@teknik.io Original-Sender: "Debbugs-submit" Resent-CC: bug-guix@gnu.org Resent-Date: Thu, 03 Jun 2021 14:55:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 48811 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 48811@debbugs.gnu.org X-Debbugs-Original-To: bug-guix@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.162273209025129 (code B ref -1); Thu, 03 Jun 2021 14:55:01 +0000 Received: (at submit) by debbugs.gnu.org; 3 Jun 2021 14:54:50 +0000 Received: from localhost ([127.0.0.1]:44488 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lookD-0006XF-KB for submit@debbugs.gnu.org; Thu, 03 Jun 2021 10:54:50 -0400 Received: from lists.gnu.org ([209.51.188.17]:46654) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lol4V-0006NU-KR for submit@debbugs.gnu.org; Thu, 03 Jun 2021 06:59:31 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:41566) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1lol4V-0008Lc-8e for bug-guix@gnu.org; Thu, 03 Jun 2021 06:59:31 -0400 Received: from mail.teknik.io ([5.79.72.163]:62427) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1lol4T-0002Nx-E0 for bug-guix@gnu.org; Thu, 03 Jun 2021 06:59:30 -0400 dkim-signature: v=1; a=rsa-sha256; d=teknik.io; s=dkim; c=relaxed/relaxed; q=dns/txt; h=From:Subject:Date:Message-ID:To:MIME-Version:Content-Type:Content-Transfer-Encoding; bh=KsnI0npr+uxpoFQ4lUTcD+lcT3M0w7+I+DGMETrv3WE=; b=RElScwcUrJB0KClOzDCPK0U6WhOpna+ngqdUyk1GWHRw5ni/U5/3CRfAs9U5nUPzEpihdnzRoteOgoXFJTIO/Y3pGoZkHKMvwh2mKpEUM9lpbi587KyhkVcaa1JU7f5QiMNzj1LRAkrjok5BvBsegzLWWAzmbt8y2ZvIsI0dQox9bgmdYGnJvaEYL4LvrxR4lTjkGH7HyzYDu2VwjEUMEhkhdokUhioQFTjtrUjyAr+mUMOCwjNJ4/wX99 Q6lmEvKJVK81LJixoU9JTTMVyzXVdpPJZGYEQ9DGU24DRjKvU3Xz6486tvfxBa+Z9Uxz7uQandBEdXfi/O9LVt25PDZQ== Received: from mail.teknik.io (TEKNIK-SERVER [5.79.72.163]) by mail.teknik.io with ESMTPSA (version=TLSv1.2 cipher=ECDHE-ECDSA-AES128-GCM-SHA256 bits=128) ; Thu, 3 Jun 2021 02:58:46 -0700 Mime-Version: 1.0 Date: Thu, 03 Jun 2021 09:58:46 +0000 Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: quoted-printable X-Mailer: RainLoop/1.11.3 From: meedstrom@teknik.io Message-ID: <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> Received-SPF: pass client-ip=5.79.72.163; envelope-from=meedstrom@teknik.io; helo=mail.teknik.io X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-Mailman-Approved-At: Thu, 03 Jun 2021 10:54:49 -0400 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) Running ~guix build r-minimal~ fails with the following messages. Sounds = like it cannot find the=0Astyle file plain.bst and some math fonts; maybe= upstream changed the dependencies. Or I read it=0Awrong and it's some ot= her error from the make target "vignettes-no-lattice".=0A=0ALet me know i= f it works for you and the issue's on my end.=0A=0A#+begin_example=0Abuil= ding/updating vignettes for package 'grid' ...=0Aprocessing 'grid.Rnw'=0A= Error: compiling TeX file 'grid.tex' failed with message:=0ARunning 'texi= 2dvi' on 'grid.tex' failed.=0ABibTeX errors:=0AThe top-level auxiliary fi= le: grid.aux=0AI couldn't open style file plain.bst=0A---line 33 of file = grid.aux=0A: \bibstyle{plain=0A: }=0AI'm skipping whatever remains of thi= s command=0AI found no style file---while reading file grid.aux=0AExecuti= on halted=0Abuilding/updating vignettes for package 'parallel' ...=0Abuil= ding/updating vignettes for package 'utils' ...=0Abuilding/updating vigne= ttes for package 'stats' ...=0Aprocessing 'reshape.Rnw'=0AError: compilin= g TeX file 'reshape.tex' failed with message:=0ARunning 'texi2dvi' on 're= shape.tex' failed.=0ALaTeX errors:=0A! Math formula deleted: Insufficient= symbol fonts.=0A\endtabular ->\crcr \egroup \egroup $=0A\egroup=0Al.22 \= maketitle=0A=0AExecution halted=0Amake[1]: *** [Makefile:120: vignettes-n= o-lattice] Error 1=0Amake[1]: Leaving directory '/tmp/guix-build-r-minima= l-4.1.0.drv-0/R-4.1.0/src/library'=0Amake: *** [Makefile:81: vignettes] E= rror 2=0Acommand "make" "-j" "4"=0A"LDFLAGS=3D-Wl,-rpath=3D/gnu/store/qsq= gl8d8cn9v55z085jlpxarbf1zss8i-r-minimal-4.1.0/lib/R/lib"=0A"PKG_BUILT_STA= MP=3D1970-01-01" failed with status 2=0A#+end_example=0A=0A--=0AMartin Ed= str=C3=B6m From unknown Sat Jun 21 05:19:13 2025 X-Loop: help-debbugs@gnu.org Subject: bug#48811: R 4.1.0 does not build Resent-From: Eric Brown Original-Sender: "Debbugs-submit" Resent-CC: bug-guix@gnu.org Resent-Date: Tue, 08 Jun 2021 16:04:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 48811 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: meedstrom@teknik.io Cc: 48811@debbugs.gnu.org Received: via spool by 48811-submit@debbugs.gnu.org id=B48811.162316819520466 (code B ref 48811); Tue, 08 Jun 2021 16:04:02 +0000 Received: (at 48811) by debbugs.gnu.org; 8 Jun 2021 16:03:15 +0000 Received: from localhost ([127.0.0.1]:59583 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lqeCA-0005K1-P8 for submit@debbugs.gnu.org; Tue, 08 Jun 2021 12:03:14 -0400 Received: from wout5-smtp.messagingengine.com ([64.147.123.21]:48465) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lqeC8-0005Jm-7v for 48811@debbugs.gnu.org; Tue, 08 Jun 2021 12:03:12 -0400 Received: from compute6.internal (compute6.nyi.internal [10.202.2.46]) by mailout.west.internal (Postfix) with ESMTP id 364231AC3; Tue, 8 Jun 2021 12:03:06 -0400 (EDT) Received: from mailfrontend1 ([10.202.2.162]) by compute6.internal (MEProxy); Tue, 08 Jun 2021 12:03:06 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=ericcbrown.com; h=from:to:cc:subject:references:date:in-reply-to:message-id :mime-version:content-type; s=fm2; bh=W4cTs+w6oWhPxlm9cb3+Uv4a/h ZNBOfoWnWqONiThAY=; b=g1Z0KN+qWjUWQ/7bHFM8YvcfrCbefMiMasZjBAV2OE SWckmK0EM51gA1d9jJMMJspyRtae56W+cDoQ6gduYYu0X72X26rOCWVOwpHUparh hXXIHcQsL5IoLE8dJC3jUJdRhRGp4+RvTa00BgMfSUXQI8BPo0fvRwP7MrVNpVnK XVGCkK/HSAR3YckYfUGZm3Bo1HGQJ68w1NRyzCSUsdZmGgpivLGud3iU8G3WynPi cgCIVFEFwDqDFnZC9mgCW5hhbGjZucqKcspM2Xab88+MIKJdvjeVZV9Qq6mr2vQ1 2s+EsPOtvbjdy31IrVNgxgN3WYwxzlkXhWeWKZuHwldA== DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d= messagingengine.com; h=cc:content-type:date:from:in-reply-to :message-id:mime-version:references:subject:to:x-me-proxy :x-me-proxy:x-me-sender:x-me-sender:x-sasl-enc; s=fm3; bh=W4cTs+ w6oWhPxlm9cb3+Uv4a/hZNBOfoWnWqONiThAY=; b=k2EWczZQE6VMBOV1rDIzfH gKO/DiFFKLdSf0yPV1Mt2atRqUU5nBKjWB7zVmEhWQZBkxFqQQqccE9krf3qO6DT qDMcwr0R76E3BOWWLO/4kAfAcrcSlK4oMbpcjuwaAlreBqcVFRZIFDTt8PLZb2WZ 1QQ0BTiux9NInVNAr2oh573JeocigH67sYRt33wSksX35tf6ASQ3u74M7pdQZ5qP OU9PaHM+YVjAMSzHAPSE+UZcNHWR+Ns7XdwOoi/Py+EOMysd50CdRCU8djmnHY4z Xsm1bM1xmC+AtJU+9xLojA7Y08h3KLQtd+5Y6CXfRYusxMLIAr7kzFKeWGl7JOEA == X-ME-Sender: X-ME-Received: X-ME-Proxy-Cause: gggruggvucftvghtrhhoucdtuddrgeduledrfedtledgkeduucetufdoteggodetrfdotf fvucfrrhhofhhilhgvmecuhfgrshhtofgrihhlpdfqfgfvpdfurfetoffkrfgpnffqhgen uceurghilhhouhhtmecufedttdenucenucfjughrpefhvffufhffjgfkfgggtgesthdtre dttdertdenucfhrhhomhepgfhrihgtuceurhhofihnuceovggtsghrohifnhesvghrihgt tggsrhhofihnrdgtohhmqeenucggtffrrghtthgvrhhnpeetgfetieeukeegtdefieegte etjeduteehgeeukeejuedtfefghfduudeijeevvdenucevlhhushhtvghrufhiiigvpedt necurfgrrhgrmhepmhgrihhlfhhrohhmpegvtggsrhhofihnsegvrhhitggtsghrohifnh drtghomh X-ME-Proxy: Received: by mail.messagingengine.com (Postfix) with ESMTPA; Tue, 8 Jun 2021 12:03:05 -0400 (EDT) From: Eric Brown References: <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> Mail-reply-to: Eric Brown Mail-followup-to: Eric Brown Date: Tue, 08 Jun 2021 11:03:05 -0500 In-Reply-To: <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> (meedstrom@teknik.io's message of "Thu, 03 Jun 2021 09:58:46 +0000") Message-ID: <87h7i8tkcm.fsf@ericcbrown.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/28.0.50 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain X-Spam-Score: -0.7 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.7 (-) meedstrom@teknik.io writes: > Running ~guix build r-minimal~ fails with the following messages. Sounds like it cannot find the > style file plain.bst and some math fonts; maybe upstream changed the dependencies. Or I read it > wrong and it's some other error from the make target "vignettes-no-lattice". > > Let me know if it works for you and the issue's on my end. > I was able to `guix build r-minimal' and it pulled from the substitute servers. From unknown Sat Jun 21 05:19:13 2025 X-Loop: help-debbugs@gnu.org Subject: bug#48811: R 4.1.0 does not build Resent-From: zimoun Original-Sender: "Debbugs-submit" Resent-CC: bug-guix@gnu.org Resent-Date: Wed, 09 Jun 2021 14:13:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 48811 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: meedstrom@teknik.io Cc: 48811@debbugs.gnu.org Received: via spool by 48811-submit@debbugs.gnu.org id=B48811.162324796125072 (code B ref 48811); Wed, 09 Jun 2021 14:13:01 +0000 Received: (at 48811) by debbugs.gnu.org; 9 Jun 2021 14:12:41 +0000 Received: from localhost ([127.0.0.1]:34345 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lqywj-0006WK-MB for submit@debbugs.gnu.org; Wed, 09 Jun 2021 10:12:41 -0400 Received: from mail-wm1-f46.google.com ([209.85.128.46]:53147) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lqywf-0006Va-3h for 48811@debbugs.gnu.org; Wed, 09 Jun 2021 10:12:39 -0400 Received: by mail-wm1-f46.google.com with SMTP id f17so4126578wmf.2 for <48811@debbugs.gnu.org>; Wed, 09 Jun 2021 07:12:37 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:references:date:in-reply-to:message-id :user-agent:mime-version; bh=7XzB67oIDdDyZQqNRBHa17jh5rtHbo36ojVa+xTeYyI=; b=VSL/g0Z/q51xOZZiVTcWudQlHRo6s/OfQxS6LfJq1jhuYx0Yz6SXrAIBI9AyrMM3Bd bowrGQsEVQD8oQlT1eNMa6A/KsVjFXfAcyx4PwsQ94/St88QCSDZ3eAxbVELzO6akPKJ 3KZDjqX5pM/ueZjLFYNezTxw42Yr3J1R/edJHDh1bJzMgV/Dqzmd3fme/7emoOb5+VQx 77/uKzJ1RtYCwWCa9SO+Kw2RA/BPYczgoTZerx5TUQ0i8/3tN6zgunWBtT08jF1Mys8L 4ESRYjmaP6Tfm66laCZuvZqXpQKiThYIPRcWZTmo5HDroTasaEkNq67t8AO445uBcS3Q xphg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:references:date:in-reply-to :message-id:user-agent:mime-version; bh=7XzB67oIDdDyZQqNRBHa17jh5rtHbo36ojVa+xTeYyI=; b=qldB1YyR6sS/BfG6VxjoMNq+68CVJK39p0usgx6wzM/k4S6Sn0yn85oLGrPa/1R51B WCxzGdSuG4nJ312KXtyeJl33gaIpxCrR0hfjsbYfYbY4uyGOc9berB64F2F+jtB7qlxg k/WFInGNBxx5Y0BuOFgDXgpyNUXwWSQh202OjJ3/RKqYHPxsdIrg/YK37IK2vDcRqXZ6 wbx0jRNYQFoPIxqyKiMCHAKwM9egBYwdf9SHPfUN+XM59zWIRbfrVJCDgbXwYQ+NkZEc n1WXPIcU9tBXCScj2RH2n44IGw3K2ItEnc/tTtw1UMukGAAV95vJWIKACpcpS4M2Adfa C+WA== X-Gm-Message-State: AOAM532TQyjkkJ/dqUhhS9afQo2AdC8zOCDlnbDvLBkb6PsPKHWbqG7+ dudpI3smukvWlnwhPNtGLpaJaEVqquY= X-Google-Smtp-Source: ABdhPJyqtqcUvNJGg+Dsn+i3Sjwb17Va6NkYw7VYQVAKQmOgvM/jfivPzdY/wxv3Vurfzw3DY9DQBw== X-Received: by 2002:a7b:c005:: with SMTP id c5mr6136wmb.113.1623247951143; Wed, 09 Jun 2021 07:12:31 -0700 (PDT) Received: from pfiuh02 ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id n9sm21874831wmc.20.2021.06.09.07.12.30 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 09 Jun 2021 07:12:30 -0700 (PDT) From: zimoun References: <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> Date: Wed, 09 Jun 2021 15:14:15 +0200 In-Reply-To: <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> (meedstrom@teknik.io's message of "Thu, 03 Jun 2021 09:58:46 +0000") Message-ID: <87sg1rji3c.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi, On Thu, 03 Jun 2021 at 09:58, meedstrom@teknik.io wrote: > Running ~guix build r-minimal~ fails with the following messages. Which version of Guix did you use? With or without substitutes? Using Guix 2d31eee, it works fine for me (on x86_64). Even, it builds fine, with: --8<---------------cut here---------------start------------->8--- $ guix build r-minimal --no-grafts --check [...] phase `compress-documentation' succeeded after 0.0 seconds guix build: error: derivation `/gnu/store/a493xc5qhv0yv8jjvf7zd62ppld2g9pv-r-minimal-4.1.0.drv' may not be deterministic: output `/gnu/store/p86pzn2pq2jq3jwa4jf1pi5c1wbb04l1-r-minimal-4.1.0' differs --8<---------------cut here---------------end--------------->8--- All the best, simon From unknown Sat Jun 21 05:19:13 2025 X-Loop: help-debbugs@gnu.org Subject: bug#48811: R 4.1.0 does not build Resent-From: meedstrom@teknik.io Original-Sender: "Debbugs-submit" Resent-CC: bug-guix@gnu.org Resent-Date: Sun, 13 Jun 2021 15:20:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 48811 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: "zimoun" Cc: 48811@debbugs.gnu.org Received: via spool by 48811-submit@debbugs.gnu.org id=B48811.162359755525343 (code B ref 48811); Sun, 13 Jun 2021 15:20:04 +0000 Received: (at 48811) by debbugs.gnu.org; 13 Jun 2021 15:19:15 +0000 Received: from localhost ([127.0.0.1]:44223 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lsRtK-0006af-Jb for submit@debbugs.gnu.org; Sun, 13 Jun 2021 11:19:14 -0400 Received: from mail.teknik.io ([5.79.72.163]:60677) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lsMNv-0000aC-Sw for 48811@debbugs.gnu.org; Sun, 13 Jun 2021 05:26:28 -0400 dkim-signature: v=1; a=rsa-sha256; d=teknik.io; s=dkim; c=relaxed/relaxed; q=dns/txt; h=From:Subject:Date:Message-ID:To:CC:MIME-Version:Content-Type:Content-Transfer-Encoding:In-Reply-To:References; bh=v1XiZgGOaaxc7GMD7pttsDiPuxc41m9DWxcusFJgLIs=; b=VZ3GPK2GoJ3Ahp4tR3DXpprJi0EpPwRm9jqlVgfp9tLL3x6AHWl/NMCbSLDXgxa7fbH4sv85BBL0CipnCfIe343VRAjpr1y/ZlbTKYgJPQfLXYT9rPhVCu9Ara3QsQLi4DfsuABotPdemhN3BHP3GM3mprRrOXIAcQKKIN8umarUfWw6RjZYLC/GC4vfTrRrRWTfnFVhh+FcZSouQLaCal56/OugxQE1Hp8khru/PsvtUZ51TUG52L/87W nX9+tFhntDSduvdpOLHbcNZPlE2pgj76D8GQhHnEiudwwJL4eomry7pswiQ8cfcYmox6Y6fjokRMu0v3pmzJd7oFbXqg== Received: from mail.teknik.io (TEKNIK-SERVER [5.79.72.163]) by mail.teknik.io with ESMTPSA (version=TLSv1.2 cipher=ECDHE-ECDSA-AES128-GCM-SHA256 bits=128) ; Sun, 13 Jun 2021 02:26:21 -0700 Mime-Version: 1.0 Date: Sun, 13 Jun 2021 09:26:21 +0000 Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: quoted-printable X-Mailer: RainLoop/1.11.3 From: meedstrom@teknik.io Message-ID: <6c58d485329dc667d1dd286c9b491f0a@teknik.io> In-Reply-To: <87sg1rji3c.fsf@gmail.com> References: <87sg1rji3c.fsf@gmail.com> <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> X-Spam-Score: 0.0 (/) X-Mailman-Approved-At: Sun, 13 Jun 2021 11:19:13 -0400 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) It builds fine now, so this fluke will remain a mystery. I don't know the= way to check what revision of Guix I was on at the time. All the best!= =0A=0AMartin=0A=0AJune 9, 2021 2:12 PM, "zimoun" wrote:=0A=0A> Hi,=0A> =0A> On Thu, 03 Jun 2021 at 09:58, meedstrom@tek= nik.io wrote:=0A> =0A>> Running ~guix build r-minimal~ fails with the fol= lowing messages.=0A> =0A> Which version of Guix did you use? With or with= out substitutes?=0A> =0A> Using Guix 2d31eee, it works fine for me (on x8= 6_64). Even, it builds=0A> fine, with:=0A> =0A> --8<---------------cut he= re---------------start------------->8---=0A> $ guix build r-minimal --no-= grafts --check=0A> =0A> [...]=0A> =0A> phase `compress-documentation' suc= ceeded after 0.0 seconds=0A> guix build: error: derivation `/gnu/store/a4= 93xc5qhv0yv8jjvf7zd62ppld2g9pv-r-minimal-4.1.0.drv' may=0A> not be determ= inistic: output `/gnu/store/p86pzn2pq2jq3jwa4jf1pi5c1wbb04l1-r-minimal-4.= 1.0' differs=0A> --8<---------------cut here---------------end-----------= ---->8---=0A> =0A> All the best,=0A> simon From unknown Sat Jun 21 05:19:13 2025 MIME-Version: 1.0 X-Mailer: MIME-tools 5.505 (Entity 5.505) X-Loop: help-debbugs@gnu.org From: help-debbugs@gnu.org (GNU bug Tracking System) To: meedstrom@teknik.io Subject: bug#48811: closed (Re: bug#48811: R 4.1.0 does not build) Message-ID: References: <86bl890x3i.fsf@gmail.com> <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> X-Gnu-PR-Message: they-closed 48811 X-Gnu-PR-Package: guix Reply-To: 48811@debbugs.gnu.org Date: Mon, 14 Jun 2021 06:42:02 +0000 Content-Type: multipart/mixed; boundary="----------=_1623652922-759-1" This is a multi-part message in MIME format... ------------=_1623652922-759-1 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable Content-Type: text/plain; charset="utf-8" Your bug report #48811: R 4.1.0 does not build which was filed against the guix package, has been closed. The explanation is attached below, along with your original report. If you require more details, please reply to 48811@debbugs.gnu.org. --=20 48811: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D48811 GNU Bug Tracking System Contact help-debbugs@gnu.org with problems ------------=_1623652922-759-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at 48811-done) by debbugs.gnu.org; 14 Jun 2021 06:41:48 +0000 Received: from localhost ([127.0.0.1]:44812 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lsgI8-0000Bp-4Z for submit@debbugs.gnu.org; Mon, 14 Jun 2021 02:41:48 -0400 Received: from mail-wr1-f44.google.com ([209.85.221.44]:46796) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lsgI6-0000Ba-FS for 48811-done@debbugs.gnu.org; Mon, 14 Jun 2021 02:41:46 -0400 Received: by mail-wr1-f44.google.com with SMTP id a11so13187049wrt.13 for <48811-done@debbugs.gnu.org>; Sun, 13 Jun 2021 23:41:46 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:in-reply-to:references:date:message-id :mime-version:content-transfer-encoding; bh=xpBDQq8eH2l+Xz1txqz6m73ezPcThorxhipp8aN8HAM=; b=R+0EjarD3njk1r/X+8nkVAT7SwZ0Fx6iJPq4WjX2bFMHWvKb3iTCYAjo5LAt+asaAK ZNowOBwl08xnbjD5vARm+8wDelOU3eGkJu9RArZ8lEfR3rFdKIxbKHoZF/WxeSgIzNfU Ngj8Xtks3DZxoHpRbIsHgfQZrFRKnxY8jJRoY2QacMhsYMRotX7RAfEYnJtJVWsrbTnh rNN3koECBQ5Jhzi4Xcg13PgGXHOLNHWXe4DPGelOQRx3ZPGA+VIsrJyJtWKYb6Ssqe7q MhsPs1NhCpWhuylmJfWPA+9iOdvcKPxpy6VM6DWc3kVsfSrm/CtFmaOatpEFmFkgEmF/ vNew== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:in-reply-to:references:date :message-id:mime-version:content-transfer-encoding; bh=xpBDQq8eH2l+Xz1txqz6m73ezPcThorxhipp8aN8HAM=; b=SWvo0xQ/MvtKjwipY7MzkYQSlvdL35t34hRyH4Y5U553lGLVWBxIGpu6YlZEU/rcUb nlNxhkQYAqJlzh8/5vMCqErHHksPKM/Si3dA4QzVX7Io15/3Gbsi1vwvy3Ke9VqSBc4F wtlJ8hPgOxVFYIJ9aVSOM/umGm/ADGW+QSKoHZmAl9CbgWSjINjLbxickifLBY8kXKMd 3hyE5b03UnvMbmhBU8YUwUus419kTH0XJbCkOc+emF2EIu2Dd1VuHKCGimpPASoN7/zJ E/T5uCnhxFSEfoTldPXiALb3cB+FmcoFDmrAkVGIvwCUKt7KJhV2du2wja8VVWnrq6pG yaZQ== X-Gm-Message-State: AOAM530tGYZOPCPgs2zsl0+Gm3AzuuahOynvle509qnKO08Fudp4rGzs IYcUWOf4a48iNjXO0TPKM0TOsRTX3gA= X-Google-Smtp-Source: ABdhPJzD8M16yA5T3Szs98Q2TxSSxeT5uTRxjkyEBUjuRKN8erGi/YxDY8yz4kC8DAoT6jxQ/Q/XcQ== X-Received: by 2002:a5d:6acf:: with SMTP id u15mr17076963wrw.262.1623652900488; Sun, 13 Jun 2021 23:41:40 -0700 (PDT) Received: from lili ([2a01:e0a:59b:9120:65d2:2476:f637:db1e]) by smtp.gmail.com with ESMTPSA id z12sm14980846wrw.97.2021.06.13.23.41.39 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 13 Jun 2021 23:41:40 -0700 (PDT) From: zimoun To: meedstrom@teknik.io Subject: Re: bug#48811: R 4.1.0 does not build In-Reply-To: <6c58d485329dc667d1dd286c9b491f0a@teknik.io> References: <87sg1rji3c.fsf@gmail.com> <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> <6c58d485329dc667d1dd286c9b491f0a@teknik.io> Date: Mon, 14 Jun 2021 08:38:41 +0200 Message-ID: <86bl890x3i.fsf@gmail.com> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 48811-done Cc: 48811-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi, On Sun, 13 Jun 2021 at 09:26, meedstrom@teknik.io wrote: > It builds fine now, so this fluke will remain a mystery. I don't know > the way to check what revision of Guix I was on at the time. All the > best!=20 The command =E2=80=9Cguix pull --list-generations=E2=80=9D gives all the ve= rsions you used. Except if you explicitly removed some. Thanks, so closing. All the best, simon ------------=_1623652922-759-1 Content-Type: message/rfc822 Content-Disposition: inline Content-Transfer-Encoding: 7bit Received: (at submit) by debbugs.gnu.org; 3 Jun 2021 14:54:50 +0000 Received: from localhost ([127.0.0.1]:44488 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lookD-0006XF-KB for submit@debbugs.gnu.org; Thu, 03 Jun 2021 10:54:50 -0400 Received: from lists.gnu.org ([209.51.188.17]:46654) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lol4V-0006NU-KR for submit@debbugs.gnu.org; Thu, 03 Jun 2021 06:59:31 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:41566) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1lol4V-0008Lc-8e for bug-guix@gnu.org; Thu, 03 Jun 2021 06:59:31 -0400 Received: from mail.teknik.io ([5.79.72.163]:62427) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1lol4T-0002Nx-E0 for bug-guix@gnu.org; Thu, 03 Jun 2021 06:59:30 -0400 dkim-signature: v=1; a=rsa-sha256; d=teknik.io; s=dkim; c=relaxed/relaxed; q=dns/txt; h=From:Subject:Date:Message-ID:To:MIME-Version:Content-Type:Content-Transfer-Encoding; bh=KsnI0npr+uxpoFQ4lUTcD+lcT3M0w7+I+DGMETrv3WE=; b=RElScwcUrJB0KClOzDCPK0U6WhOpna+ngqdUyk1GWHRw5ni/U5/3CRfAs9U5nUPzEpihdnzRoteOgoXFJTIO/Y3pGoZkHKMvwh2mKpEUM9lpbi587KyhkVcaa1JU7f5QiMNzj1LRAkrjok5BvBsegzLWWAzmbt8y2ZvIsI0dQox9bgmdYGnJvaEYL4LvrxR4lTjkGH7HyzYDu2VwjEUMEhkhdokUhioQFTjtrUjyAr+mUMOCwjNJ4/wX99 Q6lmEvKJVK81LJixoU9JTTMVyzXVdpPJZGYEQ9DGU24DRjKvU3Xz6486tvfxBa+Z9Uxz7uQandBEdXfi/O9LVt25PDZQ== Received: from mail.teknik.io (TEKNIK-SERVER [5.79.72.163]) by mail.teknik.io with ESMTPSA (version=TLSv1.2 cipher=ECDHE-ECDSA-AES128-GCM-SHA256 bits=128) ; Thu, 3 Jun 2021 02:58:46 -0700 Mime-Version: 1.0 Date: Thu, 03 Jun 2021 09:58:46 +0000 Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: quoted-printable X-Mailer: RainLoop/1.11.3 From: meedstrom@teknik.io Message-ID: <10f0b843ffbbd618d1c66e9eab8a2da7@teknik.io> Subject: R 4.1.0 does not build To: bug-guix@gnu.org Received-SPF: pass client-ip=5.79.72.163; envelope-from=meedstrom@teknik.io; helo=mail.teknik.io X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-Debbugs-Envelope-To: submit X-Mailman-Approved-At: Thu, 03 Jun 2021 10:54:49 -0400 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.4 (--) Running ~guix build r-minimal~ fails with the following messages. Sounds = like it cannot find the=0Astyle file plain.bst and some math fonts; maybe= upstream changed the dependencies. Or I read it=0Awrong and it's some ot= her error from the make target "vignettes-no-lattice".=0A=0ALet me know i= f it works for you and the issue's on my end.=0A=0A#+begin_example=0Abuil= ding/updating vignettes for package 'grid' ...=0Aprocessing 'grid.Rnw'=0A= Error: compiling TeX file 'grid.tex' failed with message:=0ARunning 'texi= 2dvi' on 'grid.tex' failed.=0ABibTeX errors:=0AThe top-level auxiliary fi= le: grid.aux=0AI couldn't open style file plain.bst=0A---line 33 of file = grid.aux=0A: \bibstyle{plain=0A: }=0AI'm skipping whatever remains of thi= s command=0AI found no style file---while reading file grid.aux=0AExecuti= on halted=0Abuilding/updating vignettes for package 'parallel' ...=0Abuil= ding/updating vignettes for package 'utils' ...=0Abuilding/updating vigne= ttes for package 'stats' ...=0Aprocessing 'reshape.Rnw'=0AError: compilin= g TeX file 'reshape.tex' failed with message:=0ARunning 'texi2dvi' on 're= shape.tex' failed.=0ALaTeX errors:=0A! Math formula deleted: Insufficient= symbol fonts.=0A\endtabular ->\crcr \egroup \egroup $=0A\egroup=0Al.22 \= maketitle=0A=0AExecution halted=0Amake[1]: *** [Makefile:120: vignettes-n= o-lattice] Error 1=0Amake[1]: Leaving directory '/tmp/guix-build-r-minima= l-4.1.0.drv-0/R-4.1.0/src/library'=0Amake: *** [Makefile:81: vignettes] E= rror 2=0Acommand "make" "-j" "4"=0A"LDFLAGS=3D-Wl,-rpath=3D/gnu/store/qsq= gl8d8cn9v55z085jlpxarbf1zss8i-r-minimal-4.1.0/lib/R/lib"=0A"PKG_BUILT_STA= MP=3D1970-01-01" failed with status 2=0A#+end_example=0A=0A--=0AMartin Ed= str=C3=B6m ------------=_1623652922-759-1--