GNU bug report logs -
#48007
computing derivations through inferior takes twice as long
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Reported by: Ricardo Wurmus <rekado <at> elephly.net>
Date: Sat, 24 Apr 2021 21:08:02 UTC
Severity: important
Done: Ludovic Courtès <ludo <at> gnu.org>
Bug is archived. No further changes may be made.
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Message #31 received at 48007 <at> debbugs.gnu.org (full text, mbox):
Ludovic Courtès <ludo <at> gnu.org> writes:
> Ricardo Wurmus <rekado <at> elephly.net> skribis:
>
>> I tried it in the GWL with the big RNAseq workflow I adopted from PiGx
>> and the step to generate job scripts (which reference inferior packages)
>> became considerably faster. There is still potential for improvement,
>> but this change is the difference between not too bad (15 seconds) and
>> unusable (> 5 minutes).
>
> Good, that’s a step in the right direction.
>
> I’ve sent in this issue a cleaned up patch series that achieves the same
> result, plus some micro-optimizations. It’d be great if you could
> confirm it still works for you.
These patches look great to me and they work.
My real-world test case is now down to about 12 seconds.
Thanks!
--
Ricardo
This bug report was last modified 3 years and 88 days ago.
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