Subject: bug#47561: closed (Re: bug#47561: MIA 2.4.6 fails to build)

From: [email-masked] (GNU bug Tracking System)
Date: Wed, 23 Apr 2025 13:44:03 +0000

Your bug report

#47561: MIA 2.4.6 fails to build

which was filed against the guix package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to [email-masked].

-- 
47561: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=47561
GNU Bug Tracking System
Contact [email-masked] with problems

Subject: Re: bug#47561: MIA 2.4.6 fails to build
From: Maxim Cournoyer <[email-masked]>
To: Ludovic Courtès <[email-masked]>
Cc: [email-masked]
Date: Wed, 23 Apr 2025 22:43:39 +0900
List-Id: <debbugs-submit.debbugs.gnu.org>

Hi,

Ludovic Courtès <[email-masked]> writes:

> MIA 2.4.6 fails to build as of 9098745b181b3022587a35afd255f7ff1d41ac86
> presumably due to CMake shenanigans as reported here:
>
>   https://issues.guix.gnu.org/46724#9
>
> Build failure looks like this:
>
> [ 13%] Building CXX object mia/core/CMakeFiles/test-core.dir/test_core_combined.cc.o
> cd /tmp/guix-build-mia-2.4.6.drv-0/build/mia/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++  -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_VERSION=3 -DBOOST_SYSTEM_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DHAVE_CONFIG_H -I/gnu/store/n50ikpnyzdda0zklwnmqasklcrif2csg-eigen-3.3.8/include/eigen3 -I/gnu/store/c8w9z48vvx2a3q3k44ch9yn00wk1qwhb-libxml2-2.9.10/include/libxml2 -I/tmp/guix-build-mia-2.4.6.drv-0/build -I/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6  -fpermissive   -fvisibility=hidden -O2 -g -DNDEBUG   -o CMakeFiles/test-core.dir/test_core_combined.cc.o -c /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/mia/core/test_core_combined.cc
> /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc: In function ‘void vtkmia::read_normals(mia::CTriangleMesh&, vtkPointData&)’:
> /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc:179:12: error: ‘class vtkFloatArray’ has no member named ‘GetTupleValue’; did you mean ‘GetValue’?
>    normals->GetTupleValue(i, &is->x);
>             ^~~~~~~~~~~~~
>             GetValue
> /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc: In function ‘void vtkmia::read_colors(mia::CTriangleMesh&, vtkPointData&)’:
> /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc:211:11: error: ‘class vtkFloatArray’ has no member named ‘GetTupleValue’; did you mean ‘GetValue’?
>    colors->GetTupleValue(i, &is->x);
>            ^~~~~~~~~~~~~
>            GetValue
> make[2]: *** [addons/vtk/CMakeFiles/mesh-io-vtkmesh-common.dir/build.make:66: addons/vtk/CMakeFiles/mesh-io-vtkmesh-common.dir/vtkmesh.cc.o] Error 1
> make[2]: Leaving directory '/tmp/guix-build-mia-2.4.6.drv-0/build'
>
> The problem here is what we’re missing -I flags for VTK, which might be
> a CMake incompatibility issue.

Our 2.4.7 was failing again, apparently due to a newer hdf5 and GCC, so
I've applied patches from Debian among other tweaks in commit
d9831cd4399b0f81a8bd4eddab1a0c075bc7751f.

Sadly, its doc is currently non-deterministic, see bug#78012.

Anyway, closing this 4 yo one.

-- 
Thanks,
Maxim

Subject: MIA 2.4.6 fails to build
From: Ludovic Courtès <[email-masked]>
To: <[email-masked]>
Date: Fri, 02 Apr 2021 09:09:17 +0200
List-Id: <debbugs-submit.debbugs.gnu.org>

MIA 2.4.6 fails to build as of 9098745b181b3022587a35afd255f7ff1d41ac86
presumably due to CMake shenanigans as reported here:

  https://issues.guix.gnu.org/46724#9

Build failure looks like this:

--8<---------------cut here---------------start------------->8---
[ 13%] Building CXX object mia/core/CMakeFiles/test-core.dir/test_core_combined.cc.o
cd /tmp/guix-build-mia-2.4.6.drv-0/build/mia/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++  -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_VERSION=3 -DBOOST_SYSTEM_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DHAVE_CONFIG_H -I/gnu/store/n50ikpnyzdda0zklwnmqasklcrif2csg-eigen-3.3.8/include/eigen3 -I/gnu/store/c8w9z48vvx2a3q3k44ch9yn00wk1qwhb-libxml2-2.9.10/include/libxml2 -I/tmp/guix-build-mia-2.4.6.drv-0/build -I/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6  -fpermissive   -fvisibility=hidden -O2 -g -DNDEBUG   -o CMakeFiles/test-core.dir/test_core_combined.cc.o -c /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/mia/core/test_core_combined.cc
/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc: In function ‘void vtkmia::read_normals(mia::CTriangleMesh&, vtkPointData&)’:
/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc:179:12: error: ‘class vtkFloatArray’ has no member named ‘GetTupleValue’; did you mean ‘GetValue’?
   normals->GetTupleValue(i, &is->x);
            ^~~~~~~~~~~~~
            GetValue
/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc: In function ‘void vtkmia::read_colors(mia::CTriangleMesh&, vtkPointData&)’:
/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc:211:11: error: ‘class vtkFloatArray’ has no member named ‘GetTupleValue’; did you mean ‘GetValue’?
   colors->GetTupleValue(i, &is->x);
           ^~~~~~~~~~~~~
           GetValue
make[2]: *** [addons/vtk/CMakeFiles/mesh-io-vtkmesh-common.dir/build.make:66: addons/vtk/CMakeFiles/mesh-io-vtkmesh-common.dir/vtkmesh.cc.o] Error 1
make[2]: Leaving directory '/tmp/guix-build-mia-2.4.6.drv-0/build'
--8<---------------cut here---------------end--------------->8---

The problem here is what we’re missing -I flags for VTK, which might be
a CMake incompatibility issue.

Thoughts?

Ludo’.