GNU bug report logs - #46475
[core-updates] r-rda source checksum changed

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Danny Milosavljevic <dannym <at> scratchpost.org>
Subject: bug#46475: closed (Re: bug#46475: [core-updates] r-rda source
 checksum changed)
Date: Wed, 13 Jul 2022 04:58:02 +0000

[Message part 1 (text/plain, inline)]

Your bug report

#46475: [core-updates] r-rda source checksum changed

which was filed against the guix package, has been closed.

The explanation is attached below, along with your original report.
If you require more details, please reply to 46475 <at> debbugs.gnu.org.

-- 
46475: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=46475
GNU Bug Tracking System
Contact help-debbugs <at> gnu.org with problems

[Message part 2 (message/rfc822, inline)]

From: Maxim Cournoyer <maxim.cournoyer <at> gmail.com>
To: Danny Milosavljevic <dannym <at> scratchpost.org>
Cc: 46475-done <at> debbugs.gnu.org
Subject: Re: bug#46475: [core-updates] r-rda source checksum changed
Date: Wed, 13 Jul 2022 00:57:07 -0400

Hi,

Danny Milosavljevic <dannym <at> scratchpost.org> writes:

> sha256 hash mismatch for /gnu/store/fb0rqvv38pf02qv3zjvjsindjdhlbpca-rda_1.0.2-2.1.tar.gz:
>   expected hash: 1y4fawslr3i6crjaxhsdb47kfsqkyszdx6avq3r5far5a4pvc639
>   actual hash:   17ll0idnms4bcpbl65xnl8zfnwsk9ww0rg5z8qqh4ahk5qdab8zf
> hash mismatch for store item '/gnu/store/fb0rqvv38pf02qv3zjvjsindjdhlbpca-rda_1.0.2-2.1.tar.gz'
> build of /gnu/store/2w1g7wxj2hzrhdf97k4rqc2yxhlgw9l3-rda_1.0.2-2.1.tar.gz.drv failed
> View build log at '/var/log/guix/drvs/2w/1g7wxj2hzrhdf97k4rqc2yxhlgw9l3-rda_1.0.2-2.1.tar.gz.drv.bz2'.
> cannot build derivation
> `/gnu/store/8ax6w1pwfxj9zbgazqbn06mbpk8036mq-r-rda-1.0.2-2.1.drv': 1
> dependencies couldn't be built
> guix build: error: build of `/gnu/store/8ax6w1pwfxj9zbgazqbn06mbpk8036mq-r-rda-1.0.2-2.1.drv' failed
>
> The one I got is attached.

This compares the cached current version on Berlin to what we can get
from the upstream mirrors:

--8<---------------cut here---------------start------------->8---
$ diffoscope /tmp/rda-{old,new}
--- /tmp/rda-old
+++ /tmp/rda-new
├── /gnu/store/8fpk2cja3f07xls48jfnpgrzrljpqivr-coreutils-8.32/bin/stat {}
│ @@ -1,8 +1,8 @@
│  
│    Size: 6            Blocks: 0          IO Block: 4096   directory
│  Links: 1
│  Access: (0755/drwxr-xr-x)  Uid: ( 1000/   maxim)   Gid: (  998/   users)
│  
│ -Modify: 2022-07-13 04:50:34.104198791 +0000
│ +Modify: 2022-07-13 04:51:12.931057710 +0000
│   --- /tmp/rda-old/rda
├── +++ /tmp/rda-new/rda
│ │   --- /tmp/rda-old/rda/DESCRIPTION
│ ├── +++ /tmp/rda-new/rda/DESCRIPTION
│ │ @@ -13,7 +13,9 @@
│ │  Packaged: 2018-07-21 16:59:24 UTC; hornik
│ │  Repository: CRAN
│ │  Date/Publication: 2018-07-21 17:12:01 UTC
│ │  NeedsCompilation: no
│ │  X-CRAN-Original-Maintainer: Rob Tibshirani <tibs <at> stanford.edu>
│ │  X-CRAN-Comment: Orphaned and corrected on 2018-07-21 as check problems
│ │          were not corrected despite reminders.
│ │ + .
│ │ + BioC:MLInterfaces depends on this
│ │ ├── /gnu/store/8fpk2cja3f07xls48jfnpgrzrljpqivr-coreutils-8.32/bin/stat {}
│ │ │ @@ -1,8 +1,8 @@
│ │ │  
│ │ │ +  Size: 784              Blocks: 8          IO Block: 4096   regular file
│ │ │ -  Size: 746              Blocks: 8          IO Block: 4096   regular file
│ │ │  Links: 1
│ │ │  Access: (0744/-rwxr--r--)  Uid: ( 1000/   maxim)   Gid: (  998/   users)
│ │ │  
│ │ │ +Modify: 2020-01-01 15:58:30.000000000 +0000
│ │ │ -Modify: 2018-07-21 17:12:01.000000000 +0000
│ │   --- /tmp/rda-old/rda/MD5
│ ├── +++ /tmp/rda-new/rda/MD5
│ │ @@ -1,8 +1,8 @@
│ │ +2a1d3c1ed3cac2196abc5a33b27b7639 *DESCRIPTION
│ │ -25d1293d678d5fbdf2bb20bf6fc64280 *DESCRIPTION
│ │  61ebf1914538b6254a39f161f286069f *INDEX
│ │  63d89739955fd7c7e2463bb9b8ad087c *NAMESPACE
│ │  bb8590ce1b9dc15b42c525b8be97a5f4 *R/Drda1.R
│ │  1e6e07bc792443fe556c47a670320f5f *R/balanced.folds.R
│ │  1110b77a1cd5a58e979bfd3273bec2ff *R/permute.rows.R
│ │  a2fa32b198ef8951453a8b6ebffd703c *R/print.rda.R
│ │  e26dd482f297c8fe9f63631a9adbf3db *R/print.rdacv.R
│ │ ├── /gnu/store/8fpk2cja3f07xls48jfnpgrzrljpqivr-coreutils-8.32/bin/stat {}
│ │ │ @@ -1,8 +1,8 @@
│ │ │  
│ │ │    Size: 1440             Blocks: 8          IO Block: 4096   regular file
│ │ │  Links: 1
│ │ │  Access: (0644/-rw-r--r--)  Uid: ( 1000/   maxim)   Gid: (  998/   users)
│ │ │  
│ │ │ +Modify: 2020-01-01 15:58:30.000000000 +0000
│ │ │ -Modify: 2018-07-21 17:12:01.000000000 +0000
--8<---------------cut here---------------end--------------->8---

So, they changed description text a tiny bit.  I've updated the hash in
Guix.

Closing.

Maxim

[Message part 3 (message/rfc822, inline)]

From: Danny Milosavljevic <dannym <at> scratchpost.org>
To: <bug-guix <at> gnu.org>
Subject: [core-updates] r-rda source checksum changed
Date: Sat, 13 Feb 2021 01:49:15 +0100

[Message part 4 (text/plain, inline)]

sha256 hash mismatch for /gnu/store/fb0rqvv38pf02qv3zjvjsindjdhlbpca-rda_1.0.2-2.1.tar.gz:
  expected hash: 1y4fawslr3i6crjaxhsdb47kfsqkyszdx6avq3r5far5a4pvc639
  actual hash:   17ll0idnms4bcpbl65xnl8zfnwsk9ww0rg5z8qqh4ahk5qdab8zf
hash mismatch for store item '/gnu/store/fb0rqvv38pf02qv3zjvjsindjdhlbpca-rda_1.0.2-2.1.tar.gz'
build of /gnu/store/2w1g7wxj2hzrhdf97k4rqc2yxhlgw9l3-rda_1.0.2-2.1.tar.gz.drv failed
View build log at '/var/log/guix/drvs/2w/1g7wxj2hzrhdf97k4rqc2yxhlgw9l3-rda_1.0.2-2.1.tar.gz.drv.bz2'.
cannot build derivation `/gnu/store/8ax6w1pwfxj9zbgazqbn06mbpk8036mq-r-rda-1.0.2-2.1.drv': 1 dependencies couldn't be built
guix build: error: build of `/gnu/store/8ax6w1pwfxj9zbgazqbn06mbpk8036mq-r-rda-1.0.2-2.1.drv' failed

The one I got is attached.

[fb0rqvv38pf02qv3zjvjsindjdhlbpca-rda_1.0.2-2.1.tar.gz (application/gzip, attachment)]

[Message part 6 (application/pgp-signature, inline)]

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