GNU bug report logs - #45399
[PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor).

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Message #8 received at 45399 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: 45399 <at> debbugs.gnu.org
Cc: zimoun <zimon.toutoune <at> gmail.com>
Subject: [PATCH 01/10] gnu: r-sushi: Move to (gnu packages bioconductor).
Date: Wed, 23 Dec 2020 19:06:26 +0100

* gnu/packages/bioinformatics.scm (r-sushi): Move from here...
* gnu/packages/bioconductor.scm (r-sushi): ...to here.
---
 gnu/packages/bioconductor.scm   | 22 ++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 22 ----------------------
 2 files changed, 22 insertions(+), 22 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 33f66ce8be..3dd34e7f24 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9300,3 +9300,25 @@ graph with the mapped data.  In addition, @code{r-pathview} also seamlessly
 integrates with pathway and gene set (enrichment) analysis tools for
 large-scale and fully automated analysis.")
     (license license:gpl3+)))
+
+(define-public r-sushi
+  (package
+    (name "r-sushi")
+    (version "1.28.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "Sushi" version))
+              (sha256
+               (base32
+                "0ksj4f9z14mjsv6ssg5dwhpldw4r7wpdsln2if5g486mm1c56r8p"))))
+    (properties `((upstream-name . "Sushi")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biomart" ,r-biomart)
+       ("r-zoo" ,r-zoo)))
+    (home-page "https://bioconductor.org/packages/Sushi")
+    (synopsis "Tools for visualizing genomics data")
+    (description
+     "This package provides flexible, quantitative, and integrative genomic
+visualizations for publication-quality multi-panel figures.")
+    (license license:gpl2+)))
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 96fa22f1a3..6ef93d9b62 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10867,28 +10867,6 @@ with your data.")
 EMBL-EBI GWAS catalog.")
     (license license:artistic2.0)))
 
-(define-public r-sushi
-  (package
-    (name "r-sushi")
-    (version "1.28.0")
-    (source (origin
-              (method url-fetch)
-              (uri (bioconductor-uri "Sushi" version))
-              (sha256
-               (base32
-                "0ksj4f9z14mjsv6ssg5dwhpldw4r7wpdsln2if5g486mm1c56r8p"))))
-    (properties `((upstream-name . "Sushi")))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-biomart" ,r-biomart)
-       ("r-zoo" ,r-zoo)))
-    (home-page "https://bioconductor.org/packages/Sushi")
-    (synopsis "Tools for visualizing genomics data")
-    (description
-     "This package provides flexible, quantitative, and integrative genomic
-visualizations for publication-quality multi-panel figures.")
-    (license license:gpl2+)))
-
 (define-public r-dropbead
   (let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
         (revision "2"))
-- 
2.29.2

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