GNU bug report logs - #44450
Issues installing Avogadro

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From: help-debbugs <at> gnu.org (GNU bug Tracking System)
To: Maxim Cournoyer <maxim.cournoyer <at> gmail.com>
Cc: tracker <at> debbugs.gnu.org
Subject: bug#44450: closed (Issues installing Avogadro)
Date: Wed, 06 Sep 2023 04:06:01 +0000

[Message part 1 (text/plain, inline)]

Your message dated Wed, 06 Sep 2023 00:05:09 -0400
with message-id <87a5u09cay.fsf <at> gmail.com>
and subject line Re: bug#44450: Issues installing Avogadro
has caused the debbugs.gnu.org bug report #44450,
regarding Issues installing Avogadro
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs <at> gnu.org.)


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44450: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=44450
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[Message part 2 (message/rfc822, inline)]

From: Godefroy Vannoye <godefroy.vannoye <at> gmail.com>
To: bug-guix <at> gnu.org
Subject: Issues installing Avogadro
Date: Wed, 4 Nov 2020 19:17:56 +0100

Hi,

First let me apologize if I have missed something, I'm a new user of
guix and know only the basics about compilation processes.

I am using guix on the Arch distribution, and installed it using the
shell installer script. My first tests seem to indicate that guix is
installed properly.

I then tried to install Avogadro, but met the following error when
building it:

make[1]: Leaving directory '/tmp/guix-build-avogadro-1.2.0.drv-0/build'
make: *** [Makefile:155: all] Error 2
command "make" "-j" "4" failed with status 2
note: keeping build directory `/tmp/guix-build-avogadro-1.2.0.drv-0'
builder for
`/gnu/store/pc3pdcpm0mwbfvymwizfs14mdfb6qa5x-avogadro-1.2.0.drv' failed
with exit code 1
build of /gnu/store/pc3pdcpm0mwbfvymwizfs14mdfb6qa5x-avogadro-1.2.0.drv
failed

I retried to build it by running guix build avogadro -K to look at the
makefile and found at line 155

cd /tmp/guix-build-avogadro-1.2.0.drv-0/build && $(MAKE) -f
CMakeFiles/Makefile2 libavogadro/all

This is the first line of the makefile where $(MAKE) appears, but I
could not find where it was defined (I suppose it is defined as make
-j4, but it is not explicit in the makefile or in
environment-variables). This makes me assume that the error comes from
the $(MAKE), but I'm not knowledgeable enough to verify it.

Feel free to ask me anything or to explain me what I could have done wrong.

Thank you for your work and for your time,

Godefroy Vannoye

[Message part 3 (message/rfc822, inline)]

From: Maxim Cournoyer <maxim.cournoyer <at> gmail.com>
To: zimoun <zimon.toutoune <at> gmail.com>
Cc: Godefroy Vannoye <godefroy.vannoye <at> gmail.com>, 44450-done <at> debbugs.gnu.org
Subject: Re: bug#44450: Issues installing Avogadro
Date: Wed, 06 Sep 2023 00:05:09 -0400

Hi,

zimoun <zimon.toutoune <at> gmail.com> writes:

> Dear,
>
> Thank you for the report.
>
> On Wed, 04 Nov 2020 at 19:17, Godefroy Vannoye <godefroy.vannoye <at> gmail.com> wrote:
>
>> First let me apologize if I have missed something, I'm a new user of
>> guix and know only the basics about compilation processes.
>
> Welcome! :-)
>
>
>> I am using guix on the Arch distribution, and installed it using the
>> shell installer script. My first tests seem to indicate that guix is
>> installed properly.
>
> The Guix Data Service indicates that the package avogrado is broken.
>
> https://data.guix.gnu.org/repository/1/branch/master/package/avogadro/output-history

We now have avogradro2, which builds correctly.

-- 
Thanks,
Maxim

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