From unknown Fri Sep 05 09:10:53 2025 Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.509 (Entity 5.509) Content-Type: text/plain; charset=utf-8 From: bug#44345 <44345@debbugs.gnu.org> To: bug#44345 <44345@debbugs.gnu.org> Subject: Status: [PATCH 1/2] gnu: Add r-metafor. Reply-To: bug#44345 <44345@debbugs.gnu.org> Date: Fri, 05 Sep 2025 16:10:53 +0000 retitle 44345 [PATCH 1/2] gnu: Add r-metafor. reassign 44345 guix-patches submitter 44345 Aniket Patil severity 44345 normal tag 44345 patch thanks From debbugs-submit-bounces@debbugs.gnu.org Sat Oct 31 11:11:13 2020 Received: (at submit) by debbugs.gnu.org; 31 Oct 2020 15:11:13 +0000 Received: from localhost ([127.0.0.1]:34289 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kYsXB-00088v-7E for submit@debbugs.gnu.org; Sat, 31 Oct 2020 11:11:13 -0400 Received: from lists.gnu.org ([209.51.188.17]:57050) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kYsX6-00088l-Ss for submit@debbugs.gnu.org; Sat, 31 Oct 2020 11:11:11 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:36966) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kYsX6-0005Tt-Oe for guix-patches@gnu.org; Sat, 31 Oct 2020 11:11:08 -0400 Received: from mail-pl1-x641.google.com ([2607:f8b0:4864:20::641]:36451) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kYsX4-0006TX-7X for guix-patches@gnu.org; Sat, 31 Oct 2020 11:11:08 -0400 Received: by mail-pl1-x641.google.com with SMTP id r10so4485709plx.3 for ; Sat, 31 Oct 2020 08:11:05 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:mime-version :content-transfer-encoding; bh=YF3Ojjh4qzdqHP0tnxQDspAaGjv4xXFfDLzPlcDRzI0=; b=QQyL3IeYpbY96R7a7IrJIvsIAgVqsEdOmYzV5m+mLQKux1cy0PkIzp6iK2ftA/XIbG IUyuYIId0ICxfssNNvl6XiXzUpKvNWq4QMQvH6x+FhZd1osII0Pzwq3SNvsnwE1PhViB F4KcXpSObY+YrZGrjYWXXffqYR/8FiMD0mgnj+LMPd8oCbfBxNtpX7DzI/vvRwj7cjvm OU9/39CKWFAdOfvgpTgGJqhi1iCUPEJC1NfcoMjgwGsD52aRt1qVush9Vmu2WJviGSf3 2vw+t2L/oLYPLIltOhpowdrblOeZsTGWd2/On7ek3iIz6nlgHKZRsdQTtft+Z+3xXft/ +2lA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:mime-version :content-transfer-encoding; bh=YF3Ojjh4qzdqHP0tnxQDspAaGjv4xXFfDLzPlcDRzI0=; b=F+bjEGmGRg3VKAs0OSBBfZuU4pReDQyiG+W+p0ygKXs/E4dGBMv3sTUOE3Dg5CaOJZ HxDZ7zN63R9NX1dMuFYCPLH6M63WtfUjRtsUSMidzC2ymW7ReHWOy2UJm1BeItnHsWSW xfwLaF01K8VkvFsIlkQ0BR9kWAB0EGRfmRuyy/CpR7K1AYNOu0HMPorCKuKLxJYyE+7o bSPPW1jXmP8YxxwRcKTISe6sRYgHcIsisYM3lU1YbxlXLMn5tIxoeMGO19Eky0BSrIws 3lYm+oQIaORe3SzPrJneX6SRPnVeZGbv3tUNsEmKJ8EEwAx3s3boEDy4R8HnU2+eed40 n0bA== X-Gm-Message-State: AOAM531vLqADIWoxOrIoqbjkM7PHgDzhFw2guUWop3dEhI7w2f7PWH5Y R+6+5ZJyuUVqJwsou5FmjBFtenzm8wsSFw== X-Google-Smtp-Source: ABdhPJy01UTTASQxK/UZdSSR75YpMKq9P69CPcmoiyqXTaonswi68UxvU8gJuMawSAs7KbXLlQAhFg== X-Received: by 2002:a17:90a:ef81:: with SMTP id m1mr8948952pjy.212.1604157064252; Sat, 31 Oct 2020 08:11:04 -0700 (PDT) Received: from thinkpad.domain.name ([59.153.2.10]) by smtp.gmail.com with ESMTPSA id y5sm2329666pfc.165.2020.10.31.08.11.02 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sat, 31 Oct 2020 08:11:03 -0700 (PDT) From: Aniket Patil To: guix-patches@gnu.org Subject: [PATCH 1/2] gnu: Add r-metafor. Date: Sat, 31 Oct 2020 20:38:50 +0530 Message-Id: <20201031150851.210931-1-aniket112.patil@gmail.com> X-Mailer: git-send-email 2.28.0 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Received-SPF: pass client-ip=2607:f8b0:4864:20::641; envelope-from=aniket112.patil@gmail.com; helo=mail-pl1-x641.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 0.7 (/) X-Debbugs-Envelope-To: submit Cc: Aniket Patil X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) * gnu/packages/cran.scm (r-metafor): New variable. --- gnu/packages/cran.scm | 39 +++++++++++++++++++++++++++++++++++++++ 1 file changed, 39 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 75d9ae7de2..cc4e5f2bba 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -24745,3 +24745,42 @@ mutations in each of 96 trinucleotide contexts and identifies the weighted combination of published signatures that, when summed, most closely reconstructs the mutational profile.") (license license:gpl2+))) + +(define-public r-metafor + (package + (name "r-metafor") + (version "2.4-0") + (source + (origin + (method url-fetch) + (uri (cran-uri "metafor" version)) + (sha256 + (base32 + "1b599fxk7s0brkchmx698fr5k4g1kzkia2rnlvhg349ffs5nfjmn")))) + (properties `((upstream-name . "metafor"))) + (build-system r-build-system) + (propagated-inputs + `(("r-matrix" ,r-matrix) + ("r-nlme" ,r-nlme))) + (home-page + "https://cran.r-project.org/web/packages/metafor") + (synopsis "Meta-Analysis Package for R") + (description + "This package provides a comprehensive collection of +functions for conducting meta-analyses in R. The package +includes functions to calculate various effect sizes or outcome +measures, fit fixed-, random-, and mixed-effects models to such +data, carry out moderator and meta-regression analyses, and create +various types of meta-analytical plots (e.g., forest, funnel, radial, +L'Abbe, Baujat, GOSH plots). For meta-analyses of binomial and +person-time data, the package also provides functions that implement +specialized methods, including the Mantel-Haenszel method, Peto's +method, and a variety of suitable generalized linear (mixed-effects) +models (i.e., mixed-effects logistic and Poisson regression models). +Finally, the package provides functionality for fitting meta-analytic +multivariate/multilevel models that account for non-independent +sampling errors and/or true effects (e.g., due to the inclusion of +multiple treatment studies, multiple endpoints, or other forms of clustering). +Network meta-analyses and meta-analyses accounting for known correlation +structures (e.g., due to phylogenetic relatedness) can also be conducted.") + (license license:gpl2+))) -- 2.28.0 From debbugs-submit-bounces@debbugs.gnu.org Mon Nov 02 06:47:24 2020 Received: (at control) by debbugs.gnu.org; 2 Nov 2020 11:47:24 +0000 Received: from localhost ([127.0.0.1]:39956 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kZYJ2-0005Fo-5T for submit@debbugs.gnu.org; Mon, 02 Nov 2020 06:47:24 -0500 Received: from mail-wr1-f48.google.com ([209.85.221.48]:38455) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kZYJ0-0005Fa-Ha for control@debbugs.gnu.org; Mon, 02 Nov 2020 06:47:22 -0500 Received: by mail-wr1-f48.google.com with SMTP id n18so14217013wrs.5 for ; Mon, 02 Nov 2020 03:47:22 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:mime-version; bh=Vy3fIeKs4lqZBkJr6ZXjbI3/UKk9tSOYHZ66KLhbWnA=; b=IqKc+By7exqT5JxLQdOifQB8SqoQ7Ap6qpTWZyKeg7He+kkFzWwgmhvjYPDEyszGij +B84snclKv1O60sX9PddeRyQ/IzVZ9zOlG12cO3V+MPYq4rpf42YvuitE3x1GC03sDgT EM5hgi5IXPw30z0c/BiHLe/zrqdLCnlxHl54JGjqx+y3ZpUNmiT6FU8uc6kB6dwJDCfB WQWxCSELG28jLKyxrIj4x/FnEiRCEfZPPXWr0D46KOSxEPkhimhmGASkhTbt5HJC13st CgjzfVHPxUSapnyrEEf/cjY7Z036Xnyubumvh8CIOSwIxOxHlgovkRvpXgqroalxaJn+ NN9Q== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:mime-version; bh=Vy3fIeKs4lqZBkJr6ZXjbI3/UKk9tSOYHZ66KLhbWnA=; b=SOk3a6JGsACG43JjLYrsuZqBAnpkYYD3T8H4CqDV/xvRBSXWqVy921aohXDdFIZeOL lR9zZY3JzbF27nJW1x+3NiI4FEhWNFs4JWJ5mSnE/IE4GdrSBg3d8jiOY0r550SUNOCg xIvLTUZkZdEq8p0o+xSz6lbWxQC3cgQKzxzFVoWSrysfk7bZHlmYOIanbYgEJrgxSd/3 hv0HwsLt6Z/hxmAFCfrNu/4JzmMriWKcDp+otSTVCU4S+HfXpJSMrgI2su9xR+URGFpo vPkD1UT8Dp7DUwPhft76A4buR5UkZlTxm7H0SDrrvi4qfoBPS5AfdNGmdYwcwOHyEzaT BizA== X-Gm-Message-State: AOAM5325KxI53blee0B4DWccp2bHA/RA+2ayCgD0DmOqcCS1WQGfCsmv 2h95bvSnKsf8LgYRD0vFoh8= X-Google-Smtp-Source: ABdhPJyYzGGsLMaukJZSJiGpNwBdJnRZKeMVTy4IaXrdJT48Lmm26eBJRoDW5pKOz7pBSbzuW1SNVA== X-Received: by 2002:adf:b1d6:: with SMTP id r22mr18905576wra.136.1604317636619; Mon, 02 Nov 2020 03:47:16 -0800 (PST) Received: from pfiuh02 ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id z5sm22141081wrw.87.2020.11.02.03.47.15 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 02 Nov 2020 03:47:16 -0800 (PST) From: zimoun To: control@debbugs.gnu.org Subject: merge 44345 44346 Date: Mon, 02 Nov 2020 12:47:15 +0100 Message-ID: <87wnz456bg.fsf@gmail.com> MIME-Version: 1.0 Content-Type: text/plain X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: control Cc: Aniket Patil X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) merge 44345 44346 thanks -- Hi Aniket, Thank you for your patches. You probably did: git send-email --to=guix-patches@gnu.org 0001-gnu-Add-r-metafor.patch git send-email --to=guix-patches@gnu.org 0002-gnu-Add-r-altmeta.patch which opens 2 bugs reports, for instance #44345 and #44346. Since the second patch requires the first one, it is better to include them to the same bug number. The easiest to do so is: git format-patch --cover-letter # edit 0000-cover-letter.patch git send-email --to=guix-patches@gnu.org 0000-cover-letter.patch # wait the bug number; check your INBOX git send-email --to=12345@debbugs.gnu.org \ 0001-gnu-Add-r-metafor.patch \ 0002-gnu-Add-r-altmeta.patch or something along these lines. For example, the number 12345 could be 44345. Well, it is a big deal; this email is sent to the server control to merge the 2 bug numbers. Hope that makes sense. Thank you again for your contribution. All the best, simon From debbugs-submit-bounces@debbugs.gnu.org Tue Dec 22 13:30:50 2020 Received: (at 44345) by debbugs.gnu.org; 22 Dec 2020 18:30:50 +0000 Received: from localhost ([127.0.0.1]:50902 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1krmQs-0006Wh-JU for submit@debbugs.gnu.org; Tue, 22 Dec 2020 13:30:50 -0500 Received: from mail-wr1-f42.google.com ([209.85.221.42]:41430) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1krmQp-0006WS-FL for 44345@debbugs.gnu.org; Tue, 22 Dec 2020 13:30:48 -0500 Received: by mail-wr1-f42.google.com with SMTP id a12so15426861wrv.8 for <44345@debbugs.gnu.org>; Tue, 22 Dec 2020 10:30:47 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:references:date:in-reply-to:message-id :user-agent:mime-version:content-transfer-encoding; bh=1pvbX3vCJ9wGdl5703gwWUYLRI8SYvknq3ZMZxdqjHo=; b=Tkf2rRW8yYZOUT9xJJcVQZqJXkM0uc1FvmQrx5YbLIT+8wP9EQ2SwpJGzGgVaZ1+cJ zO2/13/Iawf41/HbUz/XaJb1B/OUPIzcQ8XNGS8QCIrIZZdgzyqrfer6VEpZjNhjFPGC gZwsIN4Ln5mYKADNmQlgV9TvTWS3VXUlgI3gdWVjsWq8UkjAZLq12Xa58Cwk/FdwWK6h otwBKQb+7nyeJ9TvuttTasIc1vQmL75pmOWYWpmOZmwCRCiBMpBFyQqeS7J/dcmgVA1n P0/GVO19oVzALukByAh+tWyjfXNRUFwMDpWIjFzonKAobAWiBmCpIVTom6j2c98B/D+L Y1aw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:references:date:in-reply-to :message-id:user-agent:mime-version:content-transfer-encoding; bh=1pvbX3vCJ9wGdl5703gwWUYLRI8SYvknq3ZMZxdqjHo=; b=rnDxP1nknfY/eGRpt7Fx8sckmaxDED6UH6bgL4wlXDl2ao1BeT155OiGqTTskzIrZE L7cQPZQMaveR8JjsykZtlKLdXXDdTTfXHudxjXJXf53OVfOoQ5eW8Murg8ocDeju6Lxc eG+yf8bIWVvkc8/Be4e2jOSXaQPqDNTreO8smpbireP0U5hyNNZjo2WKElprKxUhUOMG 4vCmlifjOGnrYoKx9gS+qFZhwAL15STo9NULwGtsHeIYz6qZ7wIxr3XLrlgbXqL2viD6 wbYFWzUFlNCjU5F/6T/53CwkLD67Ml9a++v41hHIOUxwf9blZawSLbpk16cTYzZVFQIx 0OkQ== X-Gm-Message-State: AOAM532dUmNVj9FTz5B57B601CTmegIkpylcTHhz9DaKKP3POcm8P6/j iYIGasVBHk3AtxCdBrcOyKIoBVCMlbI= X-Google-Smtp-Source: ABdhPJzxJ190hRcUmwptNFIhzSXg4M4eWb5Ltl8M7/sCzqWtQYgnzckSiyOf/xqdOxQtpppHfcAgfQ== X-Received: by 2002:adf:ded1:: with SMTP id i17mr25396685wrn.190.1608661841685; Tue, 22 Dec 2020 10:30:41 -0800 (PST) Received: from lili (oul69-1-82-232-2-3.fbx.proxad.net. [82.232.2.3]) by smtp.gmail.com with ESMTPSA id a12sm35360520wrh.71.2020.12.22.10.30.40 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Tue, 22 Dec 2020 10:30:41 -0800 (PST) From: zimoun To: Aniket Patil Subject: Re: [bug#44345] [PATCH 1/2] gnu: Add r-metafor. References: <20201031150851.210931-1-aniket112.patil@gmail.com> Date: Tue, 22 Dec 2020 19:28:27 +0100 In-Reply-To: <20201031150851.210931-1-aniket112.patil@gmail.com> (Aniket Patil's message of "Sat, 31 Oct 2020 20:38:50 +0530") Message-ID: <86zh25snjo.fsf@gmail.com> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/27.1 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 44345 Cc: 44345@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi Aniket, On Sat, 31 Oct 2020 at 20:38, Aniket Patil wrot= e: > * gnu/packages/cran.scm (r-metafor): New variable. > --- > gnu/packages/cran.scm | 39 +++++++++++++++++++++++++++++++++++++++ > 1 file changed, 39 insertions(+) > > diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm > index 75d9ae7de2..cc4e5f2bba 100644 > --- a/gnu/packages/cran.scm > +++ b/gnu/packages/cran.scm Idem than bug#44311. Repeat here to easy the reading. :-) The patch does not apply because the file gnu/packages/cran.scm changed in the meantime. I am sorry that we have not been enough reactive. However, when creating the patch, you had used the option =E2=80=99--base= =E2=80=99; which really helps because I would be able to apply it and rebase myself. Currently, I do not know how to do without copy/pasting by hand, so loosing your authorship. Could you rebase on the top of master? If you cannot, no worry. Just let me know. All the best, simon From debbugs-submit-bounces@debbugs.gnu.org Tue Dec 22 15:47:01 2020 Received: (at submit) by debbugs.gnu.org; 22 Dec 2020 20:47:01 +0000 Received: from localhost ([127.0.0.1]:51044 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kroYe-0003nX-WE for submit@debbugs.gnu.org; Tue, 22 Dec 2020 15:47:01 -0500 Received: from lists.gnu.org ([209.51.188.17]:56980) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kroYd-0003nG-4f for submit@debbugs.gnu.org; Tue, 22 Dec 2020 15:47:00 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:54424) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kroYc-0007Jr-Rf for guix-patches@gnu.org; Tue, 22 Dec 2020 15:46:58 -0500 Received: from sender4-of-o50.zoho.com ([136.143.188.50]:21012) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kroYZ-00065x-3d for guix-patches@gnu.org; Tue, 22 Dec 2020 15:46:58 -0500 ARC-Seal: i=1; a=rsa-sha256; t=1608670012; cv=none; d=zohomail.com; s=zohoarc; b=Y7RxvvD88N0vfi6CwTTUSXi9V7K1vouTIFB9I8YbR7JgVgZBucCWDhy26niTuTqWWKwfaFntxlcDqKQZEZaw+OeCr9Pwi57xKkh8DEGX8io1uFIhmDQZ6KjwWwAzLTYlHThPjEjoVkuLVbFjIagPZB2UuUI85pQDB6KYaEUf3g0= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1608670012; h=Content-Type:Content-Transfer-Encoding:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To; bh=TqdqQv42H9oEFM3EWUlRHceSXh+Fj8uqSe7Zyye+Koc=; b=CZk6sirPOsQC6D45ZfmQw45v6SXYNuh0yvkA+hjbO3d8VvqCp3SGFHOpVH0gSTrO++CnwUFNmShlGW6qaybi3QXCVizOBKGiMNUEFwUlL19XTLJAFPDEQSMbmNOEvrCViaS35hrpP3en86vIMZ4/rqJZBPnIk2Rujb2hDGv2zGc= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1608670012; s=zoho; d=elephly.net; i=rekado@elephly.net; h=References:From:To:Cc:Subject:In-reply-to:Date:Message-ID:MIME-Version:Content-Type:Content-Transfer-Encoding; bh=TqdqQv42H9oEFM3EWUlRHceSXh+Fj8uqSe7Zyye+Koc=; b=SgCQ8ZIMmYXuXk236XgFZ34IEHvgquaMLKBSyCMfqaUCX+rDe8vzRF6hxVvFzQmd TOuvPs2kb76zOQ2TCYb6LSq/uba7Cbcvo3+XvCAoUkXhwlUOy1u/ECovffAi7hZ4tQ7 uVb6CEeZuj/wOg9n43nF/OLQw7FSYaaZRxvMzbDQ= Received: from localhost (p54ad4ffa.dip0.t-ipconnect.de [84.173.79.250]) by mx.zohomail.com with SMTPS id 1608670010146645.3148647685089; Tue, 22 Dec 2020 12:46:50 -0800 (PST) References: <20201031150851.210931-1-aniket112.patil@gmail.com> <86zh25snjo.fsf@gmail.com> User-agent: mu4e 1.4.13; emacs 27.1 From: Ricardo Wurmus To: zimoun Subject: Re: [bug#44345] [PATCH 1/2] gnu: Add r-metafor. In-reply-to: <86zh25snjo.fsf@gmail.com> X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Date: Tue, 22 Dec 2020 21:46:46 +0100 Message-ID: <8735zxo9ft.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-ZohoMailClient: External Received-SPF: pass client-ip=136.143.188.50; envelope-from=rekado@elephly.net; helo=sender4-of-o50.zoho.com X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_NONE=-0.0001, RCVD_IN_MSPIKE_H4=0.001, RCVD_IN_MSPIKE_WL=0.001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.3 (-) X-Debbugs-Envelope-To: submit Cc: guix-patches@gnu.org, 44345@debbugs.gnu.org, Aniket Patil X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -2.3 (--) Hi Simon, > > On Sat, 31 Oct 2020 at 20:38, Aniket Patil wr= ote: >> * gnu/packages/cran.scm (r-metafor): New variable. >> --- >> gnu/packages/cran.scm | 39 +++++++++++++++++++++++++++++++++++++++ >> 1 file changed, 39 insertions(+) >> >> diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm >> index 75d9ae7de2..cc4e5f2bba 100644 >> --- a/gnu/packages/cran.scm >> +++ b/gnu/packages/cran.scm > > Idem than bug#44311. > > Repeat here to easy the reading. :-) > > The patch does not apply because the file gnu/packages/cran.scm changed > in the meantime. I am sorry that we have not been enough reactive. You can still apply the patch with =E2=80=9Cgit am -C0=E2=80=9D to ignore a= ll context. Sometimes with patches that add packages this works. --=20 Ricardo From debbugs-submit-bounces@debbugs.gnu.org Tue Dec 22 17:32:58 2020 Received: (at 44345-done) by debbugs.gnu.org; 22 Dec 2020 22:32:58 +0000 Received: from localhost ([127.0.0.1]:51111 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1krqDC-0006ax-L6 for submit@debbugs.gnu.org; Tue, 22 Dec 2020 17:32:58 -0500 Received: from sender4-of-o50.zoho.com ([136.143.188.50]:21095) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1krqDA-0006al-VV; Tue, 22 Dec 2020 17:32:57 -0500 ARC-Seal: i=1; a=rsa-sha256; t=1608676374; cv=none; d=zohomail.com; s=zohoarc; b=MLaTQvq/41nhHqOxpGmx/JuwcREARfR7Jhll4DOH6aAg8FsmIxskdkfZK4lJ0oa7gMVYJswekI6OUhnTjNaODNZaecq4Q80Z3xEsMWmKA3F0CH3GUNMXesulzA3e17s6mo57N7YpMRtA/QCkq+lBImbb53KJlKXuOASExtON7L8= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1608676374; h=Content-Type:Content-Transfer-Encoding:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To; bh=E0S1Z9mLF5WNyO3od4yzhzL4RioC8h97subn0Fz6tgE=; b=BJylpcmbJu+TWTTzqoliqLeDLePmBSlh7tHc9p0qVErwpJkKZ0UHmdjtYV1p8xu7s+2tgXcutMLpVqxN86m/OxRBmRVX64ElZIH24G454IXN/TD2Jd7EgYJ/6hoxcxV5NvW2HqorspDBFPLTohx3jnsWCG44q0JVHhx0WP9Nsj8= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1608676374; s=zoho; d=elephly.net; i=rekado@elephly.net; h=References:From:To:Cc:Subject:In-reply-to:Date:Message-ID:MIME-Version:Content-Type:Content-Transfer-Encoding; bh=E0S1Z9mLF5WNyO3od4yzhzL4RioC8h97subn0Fz6tgE=; b=HLSjWWGt7dUrtTNsDHVd4ZjQa8PQK4nenz73VZ8nXisG24WYp/bV6UBDehjxkrw6 1UtBbZVfPZ5rTR1vkfKY1La5IqE4hwE/sHIbcGwCTkNSZYbPPuf9rFfgoDOXVtor4o7 RZ5H9V+FuK6dGpBQ3fb/ZmYyojub3VaP/mRoJ8PQ= Received: from localhost (p54ad4ffa.dip0.t-ipconnect.de [84.173.79.250]) by mx.zohomail.com with SMTPS id 1608676372561407.26989569168506; Tue, 22 Dec 2020 14:32:52 -0800 (PST) References: <20201031150851.210931-1-aniket112.patil@gmail.com> <86zh25snjo.fsf@gmail.com> User-agent: mu4e 1.4.13; emacs 27.1 From: Ricardo Wurmus To: zimoun Subject: Re: [bug#44345] [PATCH 1/2] gnu: Add r-metafor. In-reply-to: <86zh25snjo.fsf@gmail.com> X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Date: Tue, 22 Dec 2020 23:32:48 +0100 Message-ID: <87zh25mpyn.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-ZohoMailClient: External X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 44345-done Cc: 44346-done@debbugs.gnu.org, Aniket Patil , 44345-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) zimoun writes: > Hi Aniket, > > On Sat, 31 Oct 2020 at 20:38, Aniket Patil wr= ote: >> * gnu/packages/cran.scm (r-metafor): New variable. >> --- >> gnu/packages/cran.scm | 39 +++++++++++++++++++++++++++++++++++++++ >> 1 file changed, 39 insertions(+) >> >> diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm >> index 75d9ae7de2..cc4e5f2bba 100644 >> --- a/gnu/packages/cran.scm >> +++ b/gnu/packages/cran.scm > > Idem than bug#44311. > > Repeat here to easy the reading. :-) > > The patch does not apply because the file gnu/packages/cran.scm changed > in the meantime. I am sorry that we have not been enough reactive. I applied the two patches with commit 6d1160db8e16ee0da5b38c5297cf22cd6dd230d6. I used =E2=80=9Cgit am -C0=E2=80=9D to ignore mismatched context. I also u= pdated the descriptions and re-indented the definitions. --=20 Ricardo From debbugs-submit-bounces@debbugs.gnu.org Wed Dec 23 03:48:52 2020 Received: (at 44345-done) by debbugs.gnu.org; 23 Dec 2020 08:48:52 +0000 Received: from localhost ([127.0.0.1]:51729 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1krzpE-0002pg-2O for submit@debbugs.gnu.org; Wed, 23 Dec 2020 03:48:52 -0500 Received: from mail-wr1-f46.google.com ([209.85.221.46]:34064) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1krzpB-0002pN-SL; Wed, 23 Dec 2020 03:48:50 -0500 Received: by mail-wr1-f46.google.com with SMTP id q18so17828543wrn.1; Wed, 23 Dec 2020 00:48:49 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:in-reply-to:references:date:message-id :mime-version:content-transfer-encoding; bh=4tnxwqnzOXzXvL+AHQoqfzO5O4iZr13Hww/5KUafb+U=; b=Cgn1gtMI8IEhkG9lKlzVgRDmOE6H/oWrnw5ySzNDfEyT+W0qUIY++aRWY0sa+G7zZo vbcPTvcvhLSzyo4SUEW5JvUxiM3N0IS33LP1lgdlAWjwjZaxItSMiVjSQUljVr2UPgbA PCaOtgwJjIa2vj9ai9Diiz6CUOSZgfqQHIZ5slG5ucSgPUM7Hc7wfxyb69oJKRRfYbKW QSbeZJM5CwGhYz0EX5vBwRFTQfr5tUl33Y7Hi1T2aIKmzv7Sy3NtZe7OsfK3TSqkCtlh 8IDXn+tnuClcViT0RPd3z1J9gIWIwKH4aLHWnvE2wWNMNloYBONcYigEUuYWZFH84j/6 Nepw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:in-reply-to:references:date :message-id:mime-version:content-transfer-encoding; bh=4tnxwqnzOXzXvL+AHQoqfzO5O4iZr13Hww/5KUafb+U=; b=Rw4gF3tkYPBTZLJd26Kz7kPRWq3xV6u3aDb2ZMjh1VDZdktqvdGANLgCk7s8sgNLOI ZBATnxQOqaK2G4CyDQNyF7qBq9WebRUiRTauTqbnwq7p53UHh7ZL8MiJbunb/z3PQhZM 3F8pVQgLy7cCRKaNMlyN2YN8LpOzflayVTB2F5uzheUr3kKPwukTS6oh+Sg2P8Df8nEp 4RVlielQUz4D04OVnA1pYck2mMbMX7Km4NDSJEyBWfUeGCJSVunRzJq/yE5FMKzmL8TE 48I7sf5L5gg628uWUHgiftvz6OL5Y7w00rXTucvFJbI81amwlvHXD64m9qx30rMeizKT oEmw== X-Gm-Message-State: AOAM531iOl1CHWmdsMdF5gSoBx/wcMy3rZxLtDlRqnjxDISWu7WMe/pR zOxAdvg44TllosS0OauyB719MEvqAr0= X-Google-Smtp-Source: ABdhPJx4VuKhh5MK420MfnL1V8r9Fwsg3gBSnwrITtpdB2AQgIycH4hVzY4vRM6vpLZnSWTH4gtemQ== X-Received: by 2002:a5d:4a4e:: with SMTP id v14mr27982903wrs.80.1608713323865; Wed, 23 Dec 2020 00:48:43 -0800 (PST) Received: from lili ([2a01:e35:2e80:2030:3231:7ae:dc70:aacf]) by smtp.gmail.com with ESMTPSA id r2sm34470379wrn.83.2020.12.23.00.48.42 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 23 Dec 2020 00:48:43 -0800 (PST) From: zimoun To: Ricardo Wurmus Subject: Re: [bug#44345] [PATCH 1/2] gnu: Add r-metafor. In-Reply-To: <87zh25mpyn.fsf@elephly.net> References: <20201031150851.210931-1-aniket112.patil@gmail.com> <86zh25snjo.fsf@gmail.com> <87zh25mpyn.fsf@elephly.net> Date: Wed, 23 Dec 2020 09:47:27 +0100 Message-ID: <86pn30sycg.fsf@gmail.com> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 44345-done Cc: 44346-done@debbugs.gnu.org, Aniket Patil , 44345-done@debbugs.gnu.org X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -1.0 (-) Hi Ricardo, On Tue, 22 Dec 2020 at 23:32, Ricardo Wurmus wrote: > I applied the two patches with commit > 6d1160db8e16ee0da5b38c5297cf22cd6dd230d6. > > I used =E2=80=9Cgit am -C0=E2=80=9D to ignore mismatched context. I also= updated the > descriptions and re-indented the definitions. Thanks for both, the tip and the patch application. Cheers, simon From unknown Fri Sep 05 09:10:53 2025 Received: (at fakecontrol) by fakecontrolmessage; To: internal_control@debbugs.gnu.org From: Debbugs Internal Request Subject: Internal Control Message-Id: bug archived. Date: Wed, 20 Jan 2021 12:24:05 +0000 User-Agent: Fakemail v42.6.9 # This is a fake control message. # # The action: # bug archived. thanks # This fakemail brought to you by your local debbugs # administrator